Carassius gibelio (silver crucian carp): 127973098
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Entry
127973098 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127973098
04121 Ubiquitin system [BR:
cgib04121
]
127973098
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127973098
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127973098
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
zf-BED
Motif
Other DBs
NCBI-GeneID:
127973098
NCBI-ProteinID:
XP_052433112
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Position
B15:23005287..23008216
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AA seq
620 aa
AA seq
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MAESSEKIRSESKKLKDAPATFKSKVWTYFGFYNSADGAKLEKDYTICKNCFAKVRYTGN
TTNMHSHLSRHHPELCEKAVVGAGSKPTHPGVNTLFQAKLPPCSARAKSITNGIAVYMCK
GLRPYSEVENEGFCFLMNILEPRFDIPSRKYFAEKMIPALYDQTRAKVESALESAERVGL
TCDGWTSRATESYITVTVHFINEDWEIKSYVLQTRAMHETHTGTHIADVLKAAVGEWNLD
AKKPVVVTDNASNMRVAMDLTGYQHVRCFAHVLNLASQRALKIAAVTKVLVKVRRISTFF
HRSTTGAEALKRNQELLGLPLHKLITDMPVRWNSAYEMISRFLEQQPAVCAALLSPEVRK
NVTDCALTENDISSAEEMVEAFRPMLVATNIMCEEKNPTISVVAPLHAQLLRDTTSTEED
SPLVREIKGAINQDLSKRYQSEVEKDLLRMSSALDPRFKSLLFLSPEEVQDTYAKLQSKA
AALKEDDPVPCGDVQGDLEEEETCTAKKRKSALVDLLGQTFKKTSYVSTSATSIAEKEIK
QYQDAPSLPLTEDPLLWWKSQQHVFPLLSKLAHMHLCIPGTSVAAERVFSTAGDIISAQR
SSLTPEHADQLLFLKKNMNI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcaagcgagaaaattagaagtgagagcaagaagttaaaggacgctccagca
acatttaaatccaaagtgtggacttactttggattttataacagtgctgacggggcaaag
ctagaaaaggactacacaatatgcaagaactgctttgcaaaagtccgctacacgggaaac
acgaccaacatgcacagccacctctcgcggcatcacccggagctctgtgagaaagccgtg
gttggtgctggctcaaagccgacacaccccggcgtaaacacccttttccaggcaaagctg
ccaccttgttctgctagggcaaagtcaatcacaaatgggatcgctgtttacatgtgtaaa
gggctccgtccgtacagcgaggtggagaacgaagggttctgctttttaatgaatatctta
gagccacgctttgatattccctctcggaaatattttgctgaaaaaatgattccggcactt
tatgaccagaccagggctaaagttgagtcggcactcgagtcggcagaaagagtagggctc
acgtgtgacggatggacatcgagagccacagagtcctacataacggtcactgtacatttt
ataaacgaagactgggaaattaagtcatatgtcctgcaaacccgagcaatgcacgaaacg
cacactgggacacacattgccgatgtactgaaagccgcagtgggggagtggaatcttgac
gctaagaagccagtggttgtcaccgacaacgcatcaaacatgcgtgtagcaatggacttg
acaggataccaacatgttagatgttttgctcatgttttaaatcttgcatcccaacgtgcg
ctgaaaatagctgctgttaccaaggtacttgtcaaagttaggaggatctcaacattcttt
catcgaagcacaactggagcagaagcactgaaaagaaaccaggagctccttggcctcccc
cttcacaagctcatcacggacatgcctgttcgttggaatagtgcctatgagatgatctcc
aggtttcttgagcaacagccagctgtctgtgctgccctcttatcaccagaggtgagaaag
aatgtgactgactgtgctctgacagagaatgacatctcaagtgctgaagagatggtggaa
gcatttagaccaatgcttgtggcaacaaatatcatgtgtgaggaaaagaatcccaccatt
tcagtggttgctcctcttcatgcccaactgctgcgagacacaaccagcactgaagaagat
tcccctctggttcgagagattaagggagccatcaatcaagacctttcaaagagatatcaa
tcagaggtggaaaaagatctcctacgcatgtcctcagccctggaccctagatttaaatcc
cttttatttctgtcacctgaagaagtgcaagacacttatgcaaaactacagtcaaaagct
gcagctttaaaagaggatgatccagtgccttgtggtgatgttcagggggatttagaggaa
gaggagacctgcacagcaaaaaaaagaaagtctgcacttgttgatcttcttggtcagacc
ttcaagaagacctcttatgtctctacatcagcaacctcaattgcagagaaggagataaaa
caatatcaagatgctccttctctgcctctcactgaagatccactgttgtggtggaaatct
cagcaacatgtgttccctctcctttccaagctggcccatatgcatttgtgtattcctggg
accagtgtagcagctgagagggtcttttcaactgcaggagatattatcagtgcccaaaga
agttcactcactcctgaacatgctgaccaactcctctttctcaagaaaaatatgaacata
taa
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