Carassius gibelio (silver crucian carp): 127973104
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Entry
127973104 CDS
T08819
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127973104
09122 Translation
03015 mRNA surveillance pathway
127973104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127973104
Spliceosome [BR:
cgib03041
]
Complex A
Other components
Complex A specific factors
127973104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
127973104
NCBI-ProteinID:
XP_052433120
LinkDB
All DBs
Position
B15:22949752..22962398
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AA seq
416 aa
AA seq
DB search
MASDSGYGQPGAQQSYGSYGGSQAYQSGAQQGYGQGNGSGSYTGQSYSGYGQPSGESFGQ
STQGYSSSAYGQQTQPPAQQGYDRSESSSSSYGDKSYAQPRSYGQPSAGGASGGAYGQSS
GSYRGAPGDSRRFGDEGGSDRSEGFRGRGRGGYDRGGFDRGGRGGPPSGMGGGDRGGYKN
YGGPRDYSQKDDGDGNQDNSDNNTIFVQGLSEDITPDEVGDYFKQIGIIKINKKTGSPMI
NLYTDKATGRLKGEATVSFDDPPSAKAAIEWFDGKEFKGKPLKVSFATRRAEFTQRGGGG
GGGGGGGGGRGRGGFRGRGGFGGGPSFDVKGGDWPCPNSSCGNMNFARRYECNRCGTAKP
DGDGFGDDRGGRGGYGGDRGGFRGGRGGGGFRGGDRGGYKMGGRGDHREERRGRPY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagattcaggctacggtcagcctggcgctcaacagagctacggatcttatggt
ggatcccaggcctatcaaagtggagcacagcagggctatggtcagggtaatggcagcggc
tcttacactggacagagttacagtggttatggacagcccagtggagagagctttggccag
tcgactcagggttactcctctagtgcttatggtcagcagactcaacctccggcgcagcag
ggctacgaccgatccgaatcctcgtccagcagttatggtgataagtcgtatgcacagccg
cggtcttacggacagccgtcagcaggaggtgcttctggaggagcgtacggccagtccagc
ggatcttaccgcggcgctccaggtgacagccggaggtttggtgatgagggtggctcggac
cggtcggagggtttccggggcaggggtcgtgggggttatgaccgcggaggctttgacaga
ggtggccggggcggcccaccctccggtatgggtggtggtgaccgtggtggctacaaaaat
tacggtggacccagagactacagtcaaaaggatgatggagatggcaatcaggacaactct
gacaataacaccatctttgtccaaggtctcagtgaagacatcacccctgacgaagtgggg
gactacttcaaacagataggaatcattaagatcaataagaagaccggcagtcctatgatc
aatctgtacactgataaagccaccggacgactgaagggtgaagccaccgtgtcctttgac
gatcctccctctgctaaagctgccatcgaatggtttgatggaaaagagttcaaaggaaaa
cccctcaaggtgtcgtttgctaccagaagagctgaattcacccagagaggaggaggagga
ggaggcggaggcggaggtggtgggggacgaggacgcggcggtttccgaggcagaggaggc
ttcggtggaggtccctcgtttgatgtcaagggtggagactggccgtgtcccaacagctct
tgtggcaacatgaactttgctagaagatatgagtgcaaccgctgtggaacggctaagcct
gatggagatgggtttggagatgatcgtgggggtcgaggcgggtacggaggagaccgcgga
ggattcagaggcggcagaggaggcggaggcttcaggggtggagaccgcggggggtataaa
atgggcggaaggggagaccacagagaggagagacgaggccggccgtactga
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