Carassius gibelio (silver crucian carp): 127974261
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Entry
127974261 CDS
T08819
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127974261
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127974261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
127974261
NCBI-ProteinID:
XP_052433395
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All DBs
Position
B16:6998551..7009406
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AA seq
584 aa
AA seq
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MQSRCYHQPAGLGQDGPDHHDLQMKVDFFRKLGYSPQEVKAALRKLGMGTDTNAVLGELV
RSGAKAVPSSSSDSDDGGFSLSHRGGSSSRTQGSTLEDTSEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKAMLPDHKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKGESRVTGPLRGMYQRNDPGFGSNSPSLEQELEQKLNLDPKSS
DSRDVMFQYWDDILSTKKPLNSTTVEQRSALVDRASLQAPYPTNPSSIFSYDSGLGSYQS
QFSDPSQSIDDLHRMRSNHPPMSGNPGVPTGGQHYYDNMSSLSNYQPNFGAYNSLPVPNT
VQRYSLPAYGAWSYPYFLPQATSLPEPLPCPSSHRSPDVYGNQQHLAMPQSNAFQEEREE
VRKKLHAIFNPHHVNKVMEMFPQLKDAQQLAAEILKLKSRGEFF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccaggtgttaccatcaacccgctggcctgggccaagatggacctgaccaccat
gacctgcagatgaaggtcgacttctttcgtaagctgggatactctccacaagaggtgaag
gccgccctgaggaagctcggcatggggacggacactaacgcggtgctgggggagctggtg
cgttcaggggccaaggctgtgccctcctctagctctgacagcgatgatggtgggttcagt
ttgtcccatcggggaggaagctcatctaggacacagggctcaacgctggaggacacctct
gaaccagaaagtgacctgaagcctattgttattgatgggagcaacgtggccatgagtcat
gggaacaaggaagtgttttcttgccgtgggattgagctggcagttaattacttccttgac
cgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gacgtacctatttcagatcagcatattttggaagagctggaaaggaagaagattcttgtg
tttacaccttcacgaagggtcggaggaaagcgtgtagtttgctatgatgatcgctttatt
gtcaaattagctcatgatctggatggcattatagtgtccaacgacacatatcgtgacctg
caaagtgaacgtccggagtggaagcgttgcattgaggagagattgctcatgtactccttt
gttaatgacaagttcatgccacccgatgaccctctcggccgtcatggacctaatttagat
aattttcttcgtaaaaaagcgatgttgcctgaccacaagcgacaactctgtccatatgga
aaaaagtgcacatatgggatcaagtgtaagttctaccacccagagcgcacaaaccagtca
cagcgttctctagccgatgagcttcgagagaatgccagactgtctggttcaaaaggggaa
agcagagtaactgggccactaaggggcatgtatcaaagaaatgaccctggttttgggtcc
aactcaccctccttggagcaagaactggaacaaaagcttaacttggatcccaagagctct
gacagcagggatgttatgttccagtactgggatgacattttgtccaccaaaaagccctta
aattcaaccacagtggaacaacgcagtgctttggtagacagagccagtctgcaagcacct
tacccaacaaacccttcatccattttcagttatgactcagggcttggatcctaccaaagc
cagttttcagacccatcccagagcattgatgatttacacaggatgagatccaatcatcca
ccaatgtctggtaaccctggtgtacctacaggtggccagcactactatgacaacatgagt
tctttatctaactatcagccaaactttggtgcctacaactcccttcctgtgcccaacacc
gtccagcggtacagtcttcctgcttacggtgcctggtcttacccttacttcttaccacaa
gcaaccagtttacctgaacctttaccctgtcctagctcacacaggtctcctgatgtctac
ggaaaccagcagcacttagccatgccacagtcaaatgctttccaggaagaaagagaggag
gtcaggaagaagcttcatgcgatttttaacccgcatcatgtaaacaaagttatggaaatg
ttcccacagctgaaagatgcgcagcagctggcggcagagattctcaaactcaagtccaga
ggagagttcttctaa
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