Carassius gibelio (silver crucian carp): 127974380
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Entry
127974380 CDS
T08819
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127974380
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127974380
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
PepSY
Motif
Other DBs
NCBI-GeneID:
127974380
NCBI-ProteinID:
XP_052433592
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Position
A1:7240387..7248940
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AA seq
1135 aa
AA seq
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MDTSKSTVFCATLLKLAMLVILARHVSAQTLKYQVYEEQKVGTVIARLRDDVADVLSKLP
SSIPLRFRAMQRGSASLLSVRDQDGEISIRTKIDREKLCEKNLNCTIEFDVLTLPTEHLQ
MFHIEVEILDINDNAPQFARPVIPIEISETAAVGTRIPLDSATDPDVGENSLNTYSLTSS
DFFMIDILTRTDGAKYAELVVLKELDREVRASYELQLAASDRGVPPKFGTTLLKISIADS
NDNNPVFEKPSYVINLLENSPLGSLLIDLNATDPDEGTNGKIVYSFSSHVSPKILETFKM
NSDNGQLTLVRKVDFESTNSYDLDVQAQDMGPNSMPAHCKVIIKVVDVNDNKPDISINLM
STGNEEIAYISETAPVDTFVALVRVDDLDSGLNGEVECRLLGQGHFRLQKKYEKNYMILT
NVTLDREKRSEFSLTVIAEDKGSPSLSTIKHFTVQVQDENDNAPKFEKSRYEISTAENNS
PGAYLSSVRASDPDLGPNGQLSYSILECTVHGSSISTYVTIDPSNGDIYALRTFDREDVS
QISFLVQAQDSGSPPLHNNVTVVLTILDENDNRPVITMPQLWNHTADVPVSKYAEVGDVL
TIVRAIDYDAGANGDISCSVVGGNEAGYFAMDAKTCEIQTNVSMQDIPQDHVELTILVQD
HGAQPLSARALLRLSLYENIENHMNPHLTGRGSGDGALDVSMIIIISLGAICAVLLLIMV
AFALRCSREKKDIRSYNCRVAESTYQQHPKKPSRQIHKGEISLVPTVNGTLPIRAHHHSP
TSSPGPERAHMGSRQSQHSRQSLNSLVTISSNHIPENFALELTHATPPVEQVSQLLSILH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSDAGDSDCEMGRDSPIDRLLGD
GFGDLFHIDGHQRLHPAVMRLCTEECRVLGHSDQCWMPSQASSDYRVNMYIPGEESRPQV
LEEDQQSVDSAKKSFSTFGKDNEEECGSSLLSEMNNVFQRLLPTSYAEVSELEGCAGLPT
SPIGMEIRKGFLPGKASSTGPAYPQGVAVWAANTHFQNPGSAMMSGHGSTNHAVSQAHLK
WLPAMEEIPENYEEDDIESVLSQRQGKRNETRHEVVDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggataccagcaagagcacagtgttctgtgccactttactcaaacttgctatgctcgtt
atattggcacggcacgtctcggcgcaaactctgaaataccaagtttacgaagagcagaag
gtgggtacagttatcgccagacttcgagatgatgtcgctgatgttttgtccaaacttccg
agctcgattccgttacgctttagagccatgcagcgcggcagcgcgtctcttctctccgtg
cgcgaccaggatggagagatcagcatcaggaccaaaatagaccgcgagaaactgtgcgaa
aagaatctcaactgcactatagaatttgacgtcctcaccctccccacggagcacctacag
atgttccacatcgaagtggaaattctggacattaatgacaatgcgccacagttcgcgcgc
cccgtcattcccatagagatctccgaaaccgctgccgtagggacgcgcattccccttgac
agcgccacggatccagacgtcggggagaactctctgaacacatactctctgacctcgtct
gacttttttatgattgatattctaaccagaaccgacggcgccaagtacgcggagctcgtt
gtgcttaaagagcttgatagagaggtacgagcgagctatgaactccagcttgcagcctca
gacaggggcgttcccccaaaatttggaaccacgctcctgaaaatcagcatagctgactcg
aacgacaacaatccggtgtttgagaagccatcttatgtgatcaacttgcttgaaaattct
cctttaggcagtttgcttattgatctgaatgctactgacccagatgaagggaccaatggg
aaaattgtatattcttttagcagtcacgtgtcacctaaaatcttagagacttttaagatg
aattctgataatggtcagttgacactggtgaggaaagtagactttgaaagcacaaattcg
tatgacctagatgttcaagctcaagacatgggtcccaattcaatgccagcacattgtaaa
gtcataataaaagtggtggacgtgaatgacaacaagcctgacattagtatcaatttgatg
tccacagggaatgaggagatagcttatatatcagagacagctcctgtagatacatttgtt
gctttggtgagggtggatgacctggactctgggttgaatggagaggtggagtgccgtctc
ctcggccagggtcatttcaggctgcaaaagaaatatgagaagaattacatgatccttaca
aatgtcactctggatcgagagaagaggtcagagttcagcttgactgttatagctgaagac
aaaggctctcctagtctgtcgaccatcaaacacttcactgttcaggtccaggatgagaat
gacaacgcaccaaagtttgagaagagcaggtatgagatttccacggcagagaacaactca
ccaggagcttatctgtcatctgtgagggcctcagatcctgacctgggcccgaatggtcaa
ctgagctactctatacttgaatgtacagtccatgggagctccatctccacttacgtaacc
attgacccctctaatggagacatttatgcgctacgtacttttgatcgcgaagatgtgagt
cagatctcattcttagtccaggcccaagattctggaagtcctccgctgcataataatgtg
acagttgtgttgaccatcttggatgagaacgacaacagaccggtcatcacgatgcctcag
ctgtggaaccacacggctgatgttccagtatccaaatatgcagaggtcggtgacgtgtta
actattgtccgcgcgatagactatgatgctggcgccaatggtgatatttcgtgctctgta
gtagggggcaacgaggcaggttacttcgctatggatgctaaaacatgtgaaattcagacc
aacgtcagcatgcaggacattccacaggatcacgtggagctgaccatcctagtgcaggac
catggtgctcagcccctcagcgccagagcactactgagactttcgctttatgaaaacatt
gagaaccacatgaacccccatctgacaggtagaggaagtggagatggcgctctagatgtg
tccatgatcatcatcatctcccttggtgcgatctgcgccgttctgcttctcatcatggtg
gcctttgcccttcgctgctcacgtgaaaagaaggacatccgctcatacaactgcagggtg
gctgagtctacttaccaacagcaccctaaaaaaccctcacggcagatccacaagggtgaa
atcagtctggtgcccactgtcaatgggaccctcccaatccgggcacaccatcactcacca
acctcctcgcccggacctgaacgggcccacatgggcagtcggcagagccaacacagccgc
caatcactgaacagcttggtcactatttcctccaatcacatccctgagaacttcgccctg
gaacttacacatgccacgccccctgtggagcaagtctcacagctcctctcaatactccat
cagggtcagtatcagccgcggcccagcttcagagggaacaaatactctcgcagctacagg
tacgccctccaggacatggataagttcagtctaaaagatagtgggcgtggcgacagtgat
gcgggcgacagcgactgcgagatgggccgtgattcgcccatcgaccggttgctaggcgac
ggcttcggagacctcttccacatcgacggacaccagcgtctccacccagcagtcatgaga
ttgtgtacggaggagtgccgtgtgttgggtcactctgaccagtgctggatgccatctcag
gcgtcttcggattaccgtgtgaacatgtacattcccggagaagagagcaggcctcaggtc
cttgaagaggaccagcagtcagttgactcagctaagaagagcttttctacctttggaaaa
gacaacgaggaggaatgtggcagttctctgctgtcagaaatgaacaatgtcttccaacgt
cttctgccaacttcctacgctgaggtcagtgagcttgaaggatgcgctgggttgcccact
tcccccatcggcatggagattagaaagggcttcttgccgggtaaggcatcatctacaggc
cccgcctaccctcagggtgttgctgtgtgggcggccaacactcactttcagaatcctgga
agtgccatgatgagcggacatggctcgaccaatcacgcggtatcacaggcacatttaaaa
tggctgccggcgatggaggaaatcccagaaaactatgaagaggacgacatagagagtgtg
ctcagccagcggcagggaaaacgcaacgaaacgagacacgaggttgtcgacgctagcgaa
ctggttgccgaaattaacaaattgcttcaggatgtacgccagagttaa
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