Carassius gibelio (silver crucian carp): 127974627
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Entry
127974627 CDS
T08819
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127974627
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127974627
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
CDC13_N
Motif
Other DBs
NCBI-GeneID:
127974627
NCBI-ProteinID:
XP_052434033
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All DBs
Position
A1:complement(7482710..7498899)
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AA seq
1001 aa
AA seq
DB search
MILIFLFFSVLDGGLSQLHFSVPEEQELGTVVGNIAEDLGLDITKLSARRFQTVPSVRTP
YLEVNLENGALVVNERIDREEICRQTVPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDITVEITESATPGTRFPVENAFDPDVGTNALSTYAITTNNYFYLDVQTQGDGNRFAE
LVLDKPLDREQQAVHRYVLTAVDGGQPQRTGTALLVVKVLDSNDNAPTFDQSVYSVSLRE
NSPVGTLVIQLNATDMDEGQNGEIVYSLSTHNPPRIRDLFNIDSRTGRIEVTGEVDYEES
STHQIYVQAKDMGPNAVPAHCKVLVKLIDVNDNSPDIFFSTVTESVSEQAAPGTVIALLS
VTDRDSGENGQMSCELHGEVPFKLKSSFKNYYTIVTDGALDREKVESYTLTVVAKDKGVP
SLSTSKSIKVHVSDENDNTPRFMQSVYDVYVTENNVPGAYIYAVSAVDPDVGQNAYVTYS
ILECEIQGMSILTYVSINSENGYLYALRSFDYEQIKEFRFMVHAKDSGAPELTANSTVNV
IIVDQNDNAPSIIAPLGKNGTAREHLPRSAEPGYLVTRIVATDADDGENARLSYSILRGN
ELGMFRMDWRTGELRTARRVSSKRDPPLPYDLLIEVRDHGQPPLSSSASINVVLVDSIVE
GRSGDRGSVKSKEGSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCMAGDS
CCQCCSRQARGRKKKLSKSDIMLVQSTNVASTAQVPVEESGSFGSHHQNQNYCYQVCLTP
ESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYADQQPDIISNGSILSSETKHQRNELSY
LVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHTAGADLFSNCTEECKAL
GHSDRCWMPSFMPGDSRQGADYRSNLHVPGMDAVPDTEVQESVVPGDACNRADNRSFSTF
GKDKSHHGTLTRHELHTLLPSAQAPYKPNYLCEYSLKVYDF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgatatttctctttttctcagtcttggatggagggttatcgcagctgcacttc
tcggtaccggaggagcaggagctcgggacggttgtgggaaatatcgccgaagatctgggg
ctggacatcacaaaactttccgcgcgccgtttccagaccgttcctagcgtgcgcacgccg
tacctggaggtcaacttagagaacggagcgctggtagtgaacgagcgcatcgaccgagag
gagatatgtcgccagaccgtcccgtgcctcctccacctcgaagtgtttttggagaacccg
ctcgagcttttccgcgtcgagatcgaggtcatggatattaacgacaatccgccgagtttc
ccggagacggacatcacggtggagatcaccgaaagcgccacaccgggcacccgcttccct
gtggagaacgcgttcgaccctgatgtggggactaatgccttgagcacatacgccatcacc
actaacaactacttttatttggacgtacagacgcagggcgacggcaaccgctttgcggag
ctcgtgctggataaacccttggaccgtgaacagcaggcggtgcacaggtacgtgcttacc
gccgtggacggagggcagccgcagaggaccggcaccgcacttttagtggttaaagtgttg
gactcaaacgacaacgcgcccacgttcgatcaatccgtttactctgtgagtttgcgcgag
aactccccagttggcacgctcgttattcagctcaacgccaccgatatggacgagggccaa
aacggagagattgtttactctctaagtactcacaatccgccgcgcattcgggatctgttt
aacatcgactcgcgcactgggaggattgaggtgaccggtgaggtggattacgaggagagc
agcacgcatcagatctacgtgcaggcgaaagacatgggcccgaacgccgtgcccgcgcac
tgcaaagttctggtcaaactcatcgacgtgaacgacaactcgccggacatttttttcagc
acggtcacggagtcggtaagcgagcaggctgccccgggcactgtgattgctctgctgagc
gtcacggaccgtgactccggtgagaatggacagatgagctgcgagctgcacggcgaagtt
ccgttcaaactcaagtcgtctttcaaaaactattacacgatcgtcacggacggtgcactc
gatcgcgagaaagtggagtcttacacgctcacggtggtcgccaaagataaaggggtgccg
tctctctccacaagcaagtccatcaaagtgcacgtctcggacgaaaacgacaatactcct
agattcatgcaatcggtttacgacgtgtacgtgacggagaataacgtcccaggtgcttac
atttacgcggtgagcgccgtggatcctgatgttggacagaacgcctatgtcacttactcc
atattggagtgcgaaatacagggtatgtccatcttaacctacgtgtctatcaactctgag
aacggctacttgtacgcgctgcgctcttttgattacgagcaaataaaagagttcagattt
atggtccacgcaaaagactccggtgcacccgagttaacggccaactccaccgttaacgtc
atcatagtggaccagaacgacaatgccccgtctataattgcgcctctgggcaaaaacggc
accgcgagggaacatttaccccgctcagccgagccgggatacctggtcacccgtattgtg
gccacggatgcggatgatggtgagaacgcgcgcctgtcatacagcatcctccgaggaaac
gagctcggtatgttccggatggactggagaaccggtgaactacgtacagcgcgccgggtg
tccagcaaacgggacccgccgctcccgtacgacctgttgatcgaggtgcgcgaccacggg
cagccgccgctgtcgtcctccgcgagcatcaacgtagtgctcgtggacagcattgttgag
ggccggagcggcgaccgggggtcggtcaagtccaaagagggctcgctggacctcacactc
atcctcatcatcgcgctcggctccgtgtccttcattttcctactcgccatgatcgtgctg
gcggtgcgctgtcaaaaagacaagaaactgaacatctacacgtgcatggccggagactcg
tgctgtcagtgctgcagtcgccaagcgcgcgggcgcaagaagaagctcagtaaatcggac
atcatgctcgtccagagcactaacgtggccagcaccgcacaggtgccggtggaggagtct
ggcagcttcggctcgcaccaccagaaccagaactactgctaccaggtgtgtctgacaccg
gagtctgccaaaaccgacctgatgtttcttaaaccatgcagcccatcccggagcacagac
acagagcacaacccgtgcggtgcaatcgttaccggatacgcggatcagcaaccagatatc
atctcaaacgggagcattttatcaagcgagaccaaacaccagagaaatgaactcagctac
ctggttgacaggccccgtcgtgttaacagttcagcatttcaagaggcagatatcgtcagc
tctaaagacagcggacatggagatagcgagcagggagacagcgaccacgacgccaccaac
cggggccacacagcaggagctgatcttttctccaactgcactgaagagtgcaaggctctg
ggtcactctgaccgatgctggatgccctccttcatgcctggcgacagtcgccaaggcgcc
gattaccgtagcaacctgcacgtcccgggaatggatgcggtgccggacactgaggtacag
gagagcgtggttccgggcgatgcgtgcaatcgggccgataatagatcattctctacgttc
ggcaaagacaagtcacaccacggcacgctcacacgccatgagctacacacactcttacca
agcgcccaagcgccttacaaacccaactatctgtgtgagtactcgctcaaagtgtacgat
ttctga
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