Carassius gibelio (silver crucian carp): 127974778
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Entry
127974778 CDS
T08819
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
cgib
Carassius gibelio (silver crucian carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127974778
NCBI-ProteinID:
XP_052434247
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All DBs
Position
B16:20433342..20601737
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AA seq
1067 aa
AA seq
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MRLVILGSRPLLALTLTLALTCLKHLCHGATPFPQDLEPISTVGSERTYLYPSFQGNMSD
NDTARLGLDFQRMLRINHMVYIAARDHVFAINLSASAERIIPQQKLTWKTKDVEKCTVRG
KNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSSLEQEGEEVVGQARCPFESRQ
SNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGN
YIYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTTFLKARLNCSVPGDSF
FYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKVFNGKFKEQRNSE
SAWTPVPDETVPKPRPGSCAGDGPAAGYKSSTDFPDETLIFIKSYPLMDEAVPSVNNRPC
FTRTTSRFKLTQIAVDTAAGPYKNYTVLFLGSENGRVLKILASMHPNSTYSTQVLEDIDV
YNPNKCNVRGEDRRILGLELDKDHHALFVAFSSCVIRVPLSRCSDYDICKKSCLSSRDPY
CIWLSAGNCATVAPGFKSGFEQYVESGYPQYPDSCHDVLATTRKQNPAVDSAYGKTSPTS
ASTTNQGPALPKGVSETGTRPEEGRRGGQGSPDLKPGSVEMEGVRRPPEVDKSNHSVHYT
LLIACVLVAFVLGAFLSGFLVSCYCNHNVNKTKRLSKDPEAPIPHALSLRSLAKLNGLLE
TQNKDEKLEVSSPKLYNPFFANGKEQAHRRNAHHAAMTELIHPHHHHSAELSGLPTPDST
PELPIKSMKAFKNQWEKNQNCNNAKEPKSHNMGACRPTTGMQHQIFPFSQGLTNGQVLGS
SAHMEERKVHNAERVASQPYHCYPHKIVDVTSLDELLKHIHEINVATGKSPTVLTSSMSA
NAGQMAFANRVQPQIPETESAPYYSSSTLPRDSLTRRMDVPPEIPPHHQSTLERVSRHPS
QRHSLITTPKMPSGGVVPRQHSFNQRSAHQPLLLSRMNSNGSSSGCDVWHPLIPNGYVSR
QHSYNEQPEVHRGAIVRRTASLKPDVPPKPLFIPASSPVNQAGNFNY
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggtgattttggggtcgcggcccctcttggccttgaccctcacgctcgccctc
acctgcctgaaacatttgtgccatggtgcgacaccctttcctcaggacctggagcccatc
agcaccgtcggtagtgaacgcacctacctgtaccccagtttccaggggaacatgtcagat
aacgacactgccagactggggctggattttcagaggatgctgcggattaaccacatggtc
tacattgctgcaagagatcacgtttttgccattaacctcagcgcttcagcggagcgtatc
atcccccaacagaaactgacatggaagacaaaggatgtggagaaatgcactgtcaggggg
aaaaacagcgatgagtgttacaactacatcaaagtgctggtgccacgtaacgatgaaact
ctctttgcgtgtggaaccaatgcgttcaaccccacatgtcgcaactacaagatgtcttct
ctggagcaggaaggagaggaggtggtcggtcaagcccgttgccctttcgaatcccgccag
tccaacgttggcctgtttgccggcggtgacttttattcagccacaatgacagattttcta
gcaagtgatgcagtgatttaccgaagtttaggagaaagcagccctgtcctgcgtaccgta
aaatacgactcaaaatggctacgagagcctcattttcttcatgccattgagtacgggaac
tacatctacttctttctcagcgagattgctgtggagtacaccacccttggcaaggtggtg
ttctctcgggtcgctcgggtgtgtaagaatgataacggtggctctccaagggttctagag
cgctactggacgactttcctgaaagcccgattaaactgttcggttccgggtgattcattt
ttctactttgacgttcttcagtcattaaccaatgtcatgcagatcaaccacaggcctgcg
gtgttaggcgtctttaccactcaagccaacagtatcaccggttctgctgtatgtgcgttc
tacatggatgacatagagaaagtgtttaatgggaagtttaaggagcagcgaaacagtgag
tcggcctggacgccagttcctgatgaaacggtgcccaaaccacggccggggtcctgtgct
ggtgacggccctgctgctggttataagtcctccacagatttccctgatgaaactcttata
ttcattaagtcttatccgctaatggatgaagccgtaccgtctgtcaacaaccgaccctgc
ttcactcgaaccaccagcaggttcaagttgacccagatcgctgtggacacagcagctggc
ccttataagaactacacggttctgtttctgggttcagaaaacggacgagtcctgaagatt
ctcgccagcatgcacccaaactccacctatagcacgcaggttttggaggacatagatgtt
tacaaccccaacaagtgtaatgtgcgtggtgaagaccgtaggattctgggattggagttg
gacaaagatcatcatgccctttttgtggcgttctcaagttgcgtgatccgcgttccactc
agtcgctgttctgactatgacatctgcaaaaagagctgtctgtcctcgcgagacccttac
tgcatctggctgagtgcggggaactgtgccacagtggcgccgggattcaagtctggattc
gagcagtatgtggagagtggatatcctcagtacccagacagctgtcatgatgtcttggcc
acgactcgcaagcagaaccctgcagtggactcggcgtacggaaagacctcacccacaagc
gccagcacaaccaatcaggggccagctctgcccaagggtgtctctgagacaggtacccgc
cccgaggaggggaggcggggagggcagggttctcctgacttgaagccaggcagtgtggag
atggagggagtgcgccgaccccctgaggtagataagtccaaccacagtgttcactacact
ctgctcattgcgtgtgtcctggtggcgtttgtcctgggagctttcctctccggattcctt
gtttcctgttactgcaaccacaacgtgaacaagaccaaaaggctgtcgaaagatccagaa
gcaccaatcccacatgccctatccctgcgcagcctggccaagttaaacggcttgctagag
acccaaaacaaagacgagaagctggaggtatcttcacccaaactctacaaccctttcttt
gcgaatggaaaagagcaggcgcatcgcaggaatgcccatcatgctgccatgacagaactc
attcacccacatcatcatcactctgcagagctctctgggcttcccacacctgattcgacg
ccagagctcccaatcaagagtatgaaggccttcaagaaccaatgggagaagaatcaaaac
tgtaataacgctaaagaacccaagtcccataacatgggagcatgtcggccaaccactgga
atgcagcatcagattttccccttctcccaaggactgactaacggacaagtattaggtagc
tcagcacacatggaggaacgcaaagtccacaatgcggagcgtgtggcaagccagccatac
cactgctacccacacaagatagtggatgtgacctcgctcgacgagcttctgaaacacatc
catgaaatcaatgtggctacaggcaagagtcccactgtcctcacctcgtccatgtcagcc
aacgccggtcagatggcgtttgcaaaccgcgtacagccgcagatcccagaaacagaatct
gcaccatattacagttcctccacgcttcctcgggatagtctaactcgccgcatggatgtc
ccaccagagattcctccccatcatcaatctactcttgagagagtgtcccgtcacccgtct
caacggcactctctgataaccactcccaagatgcccagtgggggtgtggtgccacggcag
cacagcttcaaccagcgcagcgcccatcagcccctcctgctctctcgaatgaactctaat
ggcagcagttcaggttgcgacgtatggcatccactcatccctaatggatacgtatctcgc
caacatagctacaacgagcagccagaagtccaccgtggagctattgtccgtcggacagcc
tcgctcaagcccgacgtcccacccaaaccactgttcatccctgctagctcgcctgtcaac
caggcagggaacttcaactactga
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