Carassius gibelio (silver crucian carp): 127974804
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Entry
127974804 CDS
T08819
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127974804
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127974804
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_1
GST_C_3
HNH
Motif
Other DBs
NCBI-GeneID:
127974804
NCBI-ProteinID:
XP_052434294
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All DBs
Position
B16:15778301..15786194
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AA seq
981 aa
AA seq
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MADSACRELIIKAIFICLLDLAFSYSFRSCIKIPDSNHTIFRCIKCHETDITAIVSDVYP
TATNLTVSRNNITHIQGQSFHHLSNLTSLVLDANHIASIHKDAFNNLQNLMMLNLSCNHL
SSLHRDVFSDLHSLTELFLGNNNLTYIDLFLFSNLTHLKILDLRRNHLKNFSSLVECITN
LSSLEQLDLSFNNLTTLHHSTRLPNSLSKLYLSDNKLHKLGCDKSFLKYVKVLDLSDNKF
LSSKSFQGLNLKSIKYLRLRFTNVSLNKLLNYTNIQPRHIDFSGLKLKDQNLPLLCLHLR
DHQIPKMILQSNSIRSLNRSTFCNCSSITLMDLSRNEMKTTDCLQFLHCQNQLETLKIEH
NHLTRLNSCTKFNLSLKNLTYRYNRILEVSAYAFSNTPHLTKLELNINIIAYLDHKALSG
LRHLVTLRLDNNLLSDIYNDTFEDLISLKTLNLRNNQIAVIFNYAFQNLSNLTTLDLGGN
KITQIRPHAFVGLKKLAKLYLDRNRLKEIDSTLFGKLHATLQVLDLQANHILYFSEHTYS
PFINMSKLLDLKLDAQEPSGINLLPRAFFRGLTSLKSLYLTNNHIIGFGAETFDDLKSLE
FLTLDNSCVGIAQLKPGIFKNLRNLKTLFVENMGIKSFSKEVFGNLTGLKLLHLNRNAMM
SLDISLLDNLTNLTYIDMRSCPLSCSCQNSELQNWTISSKRLQFPYLYNITCQDHPGSFF
HNFDTNVCYIDIALYLFSSTCTFTILLSLIPLLYVKLYWKFKYSYYVFRSWFGEQWRRLR
DQEENYKYDAFVSYNSADEDWVMEQLLPNLEGSSFRLCLHHRDFELGRDIVDNIVAAVYG
SRKTICVVSQSFLRSEWCSLEIQLASYRLFQEMQDVLLLVLLEPIPERQLSTYHRMRKVM
LKKTYLQWPGPNCSDPNSAKELFWNQLKRALRSSNTESQEEQKMKEHKDQRREDKEGADQ
EEREYFVNQTPINNEVYYLMP
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgcgtgtcgtgaactgatcataaaggcaatattcatctgcctccttgac
cttgccttcagctacagcttcaggagttgcataaagatccctgattctaatcatacaatc
ttcagatgtattaaatgtcatgaaacagacataactgcaattgtgagtgatgtatacccc
actgcaacaaacctcacagtttctcggaataacattacacatattcaaggccaaagcttt
catcatctgtccaatctgacttctctggtactagatgctaaccatattgctagcatccac
aaagatgcttttaataacctgcagaacctcatgatgttaaatctgtcctgcaatcaccta
tcatctctccaccgtgatgttttcagtgacctacatagcctcacagagctgttcctggga
aacaataatctcacatatattgatttgttcctgttttccaatttgacacacctcaagatt
cttgacctacgcaggaaccacctgaaaaacttttcatctttggttgagtgtataacaaac
ctgtctagcttggaacaacttgacctttcttttaacaatctaaccaccctgcatcactcc
actcgtctgccgaactcgctttccaaactttacctcagtgataataaactacacaaactg
ggatgtgacaagtctttcctaaagtatgtgaaagtattagatctgtcagacaacaaattt
ctgtcatccaaatcttttcagggcttgaatctgaagagtataaagtacctgcgcttgcgc
tttaccaatgtctctctcaacaagcttcttaattataccaatattcaaccaaggcacatt
gacttctcaggtttgaaactgaaagatcagaatctgcctttgctgtgtcttcacctgcga
gatcatcaaatacctaaaatgatactccagagcaattccataagatctctaaacagaagc
acattttgtaattgctccagtatcactctaatggacctctcacggaatgagatgaaaacc
acagactgcttgcagtttctacactgtcagaaccaattggaaactctaaaaatagaacat
aaccatctgaccaggctaaactcctgcaccaaatttaatctcagcttgaaaaacctgacc
tatcgttacaatcgtattctagaggttagcgcatatgccttcagtaacacaccacattta
acaaagctcgagctaaacataaacataattgcctatttggaccataaagccttaagtgga
ctccgacatcttgtcacacttcgtctcgataacaatctgttgagcgatatctacaatgac
acctttgaggatcttatcagcttgaaaacgctcaatctgcgcaacaaccaaatagctgtg
attttcaactatgcatttcaaaatctgtcaaatctaactactttagatttaggagggaac
aagatcacacagataaggccacatgcatttgttgggctgaaaaaattggccaaactgtat
ttagacagaaatcgactgaaagagatagacagcacgctctttggaaaacttcatgccacc
ctgcaggtgctggatttacaagctaaccacattctgtatttttcagaacatacatactcg
ccatttattaatatgtccaagctccttgatctgaaacttgatgcacaggaaccaagcggc
ataaacttgttgccacgcgcatttttccgtggtttaacttctctcaaaagtctttacctc
accaacaaccatatcattggatttggagctgaaacattcgatgacctgaaaagcttggag
ttcttaactctggacaactcatgtgttgggatcgcccagctcaaacctggtattttcaaa
aaccttcgaaatttaaagacattatttgttgagaacatgggcattaaatcattttctaaa
gaggtctttggaaatctcacaggactgaagctcctacatctcaatcgcaatgccatgatg
tctttggacatcagtctgctggacaatctgaccaatctaacatatatcgacatgcgcagc
tgtcctctcagttgtagctgccagaatagtgaactacagaactggaccataagcagtaaa
agactccagtttccttatctttacaatattacctgccaagaccatccaggctcatttttt
cacaacttcgacactaatgtgtgttatatagacatagcactctacctgttttcctcaaca
tgtacattcacaatcttactgagcttgataccacttctctatgtcaaactttactggaaa
tttaagtacagctactatgtgtttcgatcatggtttggagaacagtggcgtcgcttaagg
gaccaggaagagaattacaaatatgatgccttcgtttcctacaactcagcagatgaagac
tgggttatggaacagctgctgccaaaccttgagggttcctcttttcggctctgcctgcac
cacagagatttcgagctgggccgtgatattgttgacaacattgtggctgctgtatatggc
agtcgcaaaaccatctgtgtggtcagtcagagcttccttcgcagcgaatggtgttcactg
gagatccagctggccagctatcgcctctttcaagaaatgcaggatgtgcttttgctggtt
cttctggaacctatccctgagcgacaattgtccacttatcatcgtatgaggaaggtcatg
ctcaaaaagacatatctgcagtggcctgggccaaactgttctgatccaaacagtgcaaaa
gaactgttctggaatcaattaaagagagcactaagaagcagcaacactgaaagccaagag
gagcagaagatgaaggagcataaagaccagaggagggaagacaaagagggtgcggaccag
gaggaaagagaatattttgtcaatcagacaccaataaataatgaagtatattacctgatg
ccctga
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