Carassius gibelio (silver crucian carp): 127974809
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Entry
127974809 CDS
T08819
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127974809
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127974809
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
GST_C_3
GST_C_6
Motif
Other DBs
NCBI-GeneID:
127974809
NCBI-ProteinID:
XP_052434305
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All DBs
Position
B16:15779126..15781953
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AA seq
764 aa
AA seq
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MADSACRELIIKAIFICLLDLAFSYSFRSCIEIPDSNHTIFRCIKCHETDITAIVSDVYP
TATNLTVSRNNITHIQGQSFHHLFSLTSLVLDANHIASIHKDAFNNLQNLMMLNLSCNHL
SSLHRDVFSDLHSLTELFLGNNNLTYIDLFLFSNLTNLWNLDLRRNHLKNFSSLVECITN
LSSLEQLDLSFNNLTTLHHSTRLPNSLSKLYLSDNKLHKLGCDKSFLKYVKVLDLSDNKF
LSSKSFQGLNLKSIKYLRLRFTNVSLNKLLNYTNIQPRHIDFSGLKLKDQNLSLLCLHLR
DHQIPKMILQSNSIRSLNRSTFCNCSSITLMDLSRNEMKTTDCLQFLHCQNQLETLKIEH
NHLTRLNSCTKFNLSLKNLTYRYNRILEVSAYAFSNTPHLTKLELNINIIAYLDHKALSG
LRHLVTLRLDNNLLSDIYNDTFEDLISLKTLNLRNNQIAVIFNYAFQNLSNLTTLDLGGN
NITQIRPHAFVGLKKLAELYLDRNRLKEIDSTLFGKLHATLQVLDLQANHILYFSEHTYS
PFINMSKLLDLKLDAQEPSGINLLPRAFFRGLTSLKSLYLTNNHIIGFGAETFDDLKSLE
FLTLDNSCVGIAQLKPGIFKNLRNLKTLFVENMGIKSFSKEVFGNLTGLKLLHLNRNAMM
SLDISLLDNLTNLTYIDMRSCPLSCSCQNSELQNWTISSKRLQFPYLYNITCQDHPGSFF
HNFDTNVCYIDIALHLFSSTCTFTILLSLIPLLYVKLYWKFKYS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgcgtgtcgtgaactgatcataaaggcaatattcatctgcctccttgac
cttgccttcagctacagcttcaggagttgcatagagatccctgattctaatcatacaatc
ttcagatgtattaaatgtcatgaaacagacataactgcaattgtgagtgatgtatacccc
actgcaacaaacctcacagtttctcggaataacattacacacattcaaggccaaagcttt
catcatctgttcagtctgacttctctggtactagatgctaaccatattgctagcatccac
aaagatgcttttaataacctgcagaacctcatgatgttaaatctgtcctgcaatcaccta
tcatctctccaccgtgatgttttcagtgacctacatagcctcacagagctgttcctggga
aacaataatctcacatatattgatttgttcctgttttccaatttgacaaacctctggaat
cttgacctacgcaggaaccacctgaaaaatttttcatctttggttgagtgtataacaaac
ctgtccagcttggaacaacttgacctttcttttaacaatctaaccaccctgcatcactcc
actcgtctgccgaactcgctttccaaactttacctcagtgataataaactacacaaactg
ggatgtgacaagtctttcctaaagtatgtgaaagtattagatctgtcagacaacaaattt
ctgtcatccaaatcttttcagggcttgaatctgaagagtataaagtacctgcgcttgcgc
tttaccaatgtctctctcaacaagcttcttaattataccaatattcaaccaaggcacatt
gacttctcaggtttgaaactgaaagatcagaatctgagtttgctgtgtcttcacctgcga
gatcatcaaatacctaaaatgatactccagagcaattccataagatctctaaacagaagc
acattttgtaattgctccagtatcactctaatggacctctcacggaatgagatgaaaacc
acagactgcttgcagtttctacactgtcagaaccaattggaaactctaaaaatagaacat
aaccatctgaccaggctaaactcctgcaccaaatttaatctcagcttgaaaaacctgacc
tatcgttacaatcgtattctagaggttagcgcatatgccttcagtaacacaccacattta
acaaagctcgagctaaacataaacataattgcctatttggaccataaagccttaagtgga
ctccgacatcttgtcacacttcgtctcgataacaatctgttgagcgatatctacaatgac
acctttgaggatcttatcagcctgaaaacgctcaacctgcgcaacaaccaaatagctgtg
attttcaactatgcctttcaaaatctgtcaaatctaactactttagatttaggagggaac
aatatcacacagataaggccacatgcatttgttgggctgaaaaaattggccgaactgtat
ttagacagaaatcgactgaaagagatagacagcacgctctttggaaaacttcatgccacc
ctgcaggtgctggatttacaagctaaccacattctgtatttttcagaacatacatactcg
ccatttattaatatgtccaagctccttgatctgaaacttgatgcacaggaaccaagcggc
ataaacttgttgccacgcgcatttttccgtggtttaacttctctcaaaagtctttacctc
accaacaaccatatcattggatttggggctgaaacattcgatgacctgaaaagcttggag
ttcttaactctggacaactcatgtgttgggatcgcccagctcaaacctggtattttcaaa
aaccttcgaaatttaaagacattatttgttgagaacatgggcattaaatcattttctaaa
gaggtctttggaaatctcacaggactgaagctcctacatctcaaccgcaatgccatgatg
tctttggacatcagtctgctggacaatctgaccaatctaacatatatcgacatgcgcagc
tgtcctctcagttgtagctgccagaatagtgaactacagaactggaccataagcagtaaa
agactccagtttccttatctttacaatattacctgccaagaccatccaggctcatttttt
cacaacttcgacactaatgtgtgttatatagacatagcactccacctgttttcctcaaca
tgtacattcacaatcttactgagcttgataccacttctctatgtcaaactttactggaaa
tttaagtacagctag
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