Carassius gibelio (silver crucian carp): 127974817
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Entry
127974817 CDS
T08819
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127974817
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgib01007
]
127974817
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127974817
Enzymes [BR:
cgib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
127974817
Amino acid related enzymes [BR:
cgib01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127974817
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127974817
Prokaryotic type
127974817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
Jag_N
GST_C_3
Motif
Other DBs
NCBI-GeneID:
127974817
NCBI-ProteinID:
XP_052434314
LinkDB
All DBs
Position
B16:complement(16281662..16294723)
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AA seq
1273 aa
AA seq
DB search
MDTLYISSHPDDFRSLLPSIAAVFCPSPPRIIHEDPPAEVARSRPALVLAGSGGTVLTGA
NAVSWYLAAAGNRTGSDKKQESQVWQWLSFAENELMPVACAVTFPLLGIMGVDKKLQQSS
KAELLHVLKALDETLAPRTFLVGEGVTLADIAVTVAALLPFKYALEPADRKSLVNVTRWY
NTCVNQPQFLKVLGKISLCEKMVPVTPKPSAAANATATAASEAPTPDGTPANGPPKTEAQ
LKKEAKKREKMEKFQQKKEMEEKKKTQPQTEKKAKPEKKELGVITYNIPTPPGEKKDVLS
PLPDSYSPQYVEASWYSWWEKQGFFKPEYGRKNVSDPNPRGVFMMCIPPPNVTGSLHLGH
ALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERKMTRHDLGRENFIQ
EVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDDKLSYAVQEAFVRMHEEGVIYRSKRL
VNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFSYKIEGSDEEVVVATT
RIETMLGDTAVAVHPNDSRYQHLKGKMVVHPFCDRKMPIVFDDFVDMNFGTGAVKITPAH
DHNDYEVGERHKLPFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDLGQFKEVKDN
PMVVPVCSRSKDIVEPLLKPQWYVDCREMGKQAADVVRNGELKIIPDHHLKTWFNWMDNI
RDWCISRQLWWGHRIPAYFVSVNDPSVKPGEDVDGHYWVSGRTEEEAREKAAKRFNVTAD
KISLRQDEDVLDTWFSSGIFPFSIFGWPSETEDLRVFYPGTLLETGHDILFFWVARMVMM
GLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLIESNLDP
LEIEKAKQGQKSDYPSGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNA
VKFAMRTLGEGFVPCEKAQLCGSESVSDRWILSRLSAAVALCDGGFQAYDFTTITTAIYN
FWLYELCDVYLESVKPVLSRTDSEGQKQADICRQTLYTCLEVGLRLLSPIMPFVTEELFQ
RLPRRHAQESPSSICVTPYPEPSEFCWHSEDIDRQMEFVMSVVKTIRSLRADYNLTKTRA
DCYLQCIDSDTAALVQTYSLQIQTLSYSQAIHPVVGGDSTIPQGCAVAIASDKCTVHLML
RGLIDLEKEVTKLTAKKGELEKQMEKMKEKMAKSDYKEKVPVKVQEADAEKLRQNETELQ
KVKEAIENFRKMM
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacactctatacatttcttcccacccggatgacttcaggagtttgttgccctcgatc
gctgctgtattctgtccatctcctccacgaatcatccatgaggaccctccggctgaggtg
gccagatctcgtcctgcgctggtcttagctggttcggggggcaccgtgctcaccggtgct
aatgctgtgagctggtacctagcagcagcgggcaaccggaccggcagcgataagaagcag
gagagtcaggtttggcaatggctgagctttgctgagaacgagctgatgcccgtggcctgt
gctgtgacattccctctgctggggatcatgggggttgataagaagctgcagcagagttcc
aaagcagagctgctgcatgttctcaaagctctagatgagactctagcgccgcggacgttc
cttgtaggagagggtgtgactttggcggatatagctgttactgtggcagcactcctgcca
tttaaatatgcattggagcctgcagacaggaagtcattggtgaatgtgacaagatggtat
aatacttgtgtgaaccagccacagttcctgaaggtgctgggtaaaatctcactgtgtgag
aaaatggtgcctgtgacacccaaacccagcgctgctgcgaatgccacagcaactgctgct
tctgaagcgcctacaccagacggcacacctgctaacggtcctcctaaaacagaggctcag
ctgaagaaagaggccaagaagcgagaaaagatggaaaagtttcaacagaagaaagagatg
gaagagaagaagaagacgcagcctcagactgagaaaaaggccaaacctgagaagaaggaa
ctaggtgtgatcacctacaacatcccaacgccgcctggagagaaaaaagatgtcttgagt
cctctgcctgattcttacagtcctcagtatgtggaagcgtcctggtactcctggtgggag
aaacagggtttcttcaagcctgaatatgggaggaagaatgtgagtgatccaaacccacgt
ggagtgttcatgatgtgtattcctccacctaatgtgaccggatccctccaccttggtcac
gccttgaccaatgccattcaggattgcctgacaagatggcaccggatgagaggagagacc
actctgtggaatcccggctgtgatcacgctggtatcgccacacaggtggtggtggagaag
aaactgatgagagagcgaaagatgaccagacacgatctcgggagagagaacttcatccag
gaggtctggaagtggaagaacgaaaagggagatcgcatctatcaccagctgaagaagctg
ggttcttctctggactgggacagagcttgttttaccatggatgataaactgtcgtatgcg
gtccaggaggcttttgtacgtatgcatgaggagggtgtgatctacaggagcaagagactc
gtcaactggtcctgcaccctcaactctgccatctctgacatagaggtcgataaaaaggag
ctgacggggcgaactcttcttcctgtgccaggttataaagaaaaggttgagtttggagtg
ctggtgtccttctcttacaagattgaaggatcagatgaggaggtggtagtggccaccacc
cgtattgagacgatgctcggagacacagctgttgccgtccaccctaatgactccagatat
cagcatctcaaaggaaagatggttgttcacccattctgtgacagaaagatgcccattgtt
tttgatgattttgtggatatgaacttcgggacaggtgctgtgaagatcactcctgctcat
gatcataatgattacgaggtgggagagagacacaaactgcccttcatcaacatcctagat
gaaaatggcctcctcatcaatgttcctcctccgttcctgggaatgaagcgctttgaggcc
aggaaagctgtgctccaggctctgaaagacttaggccagtttaaggaggtcaaagacaat
cccatggtggtgcccgtctgcagccgctctaaggacatagtggagcctcttctgaagcct
cagtggtacgtggactgcagggagatgggaaagcaggccgcagatgtcgtcagaaacgga
gagctcaagatcatccctgaccaccacctcaaaacctggttcaactggatggacaacatc
agggactggtgcatctcacggcagttgtggtggggtcacaggataccagcgtactttgtg
tctgtgaatgatccgtcagtcaaaccaggcgaggatgtggacggacattattgggtcagt
gggagaacagaggaggaagccagagagaaagctgccaaacgcttcaatgtcactgcagac
aaaatctctctgcgccaggatgaggatgtgttggacacttggttctcctcagggatcttc
cccttctccatctttggctggccatctgagacagaggatctgagagtcttctacccaggc
acactgttagagacgggccatgatatcctgttcttctgggtggctcgtatggtcatgatg
ggcctcaaactcactggaaaactacctttcaaagaggtctacctgcatgcggtggtacgg
gacgcccatggcaggaaaatgagcaagtctctcggtaacgtcatcgaccctctggacgtc
atcactggcatttcactggagggtcttcatgctcagctaatagaaagcaatcttgaccct
ctggagattgagaaggccaaacagggacagaaatccgactatcccagtggaattccagaa
tgcgggactgatgcgctcagatttgctctgtgtgcttacaccagtcaaggccgagacatt
aatctggatgtgaacaggattctgggatacaggcatttctgtaacaagctgtggaatgca
gtgaagtttgccatgaggactctgggggagggatttgtgccctgcgagaaagctcagctg
tgtggcagtgaaagtgtgtctgaccgctggattctgtcccgtctgagcgcagcagtagca
ctgtgcgatggcggatttcaggcttacgattttaccacaatcaccaccgccatctacaat
ttctggctgtacgagctctgcgatgtttatctggagagtgtgaagccggtgttgagtagg
acagactcggagggacaaaagcaagcggacatatgcagacagactctctacacctgtttg
gaggtgggactccgcctcctgtctcccatcatgccttttgtgaccgaagagctcttccag
cggttgccaagaagacatgctcaggaaagcccttccagcatctgtgtcacaccttaccca
gaaccatcagagttctgttggcacagcgaggacatcgaccgtcagatggagtttgtcatg
tctgtggtcaaaaccatccgatcactcagggccgattataacctgaccaagacccgcgct
gactgttatctgcagtgcatagactctgatactgctgctctggtgcagacatacagtctc
cagatccagacgctgtcttactctcaggctattcacccagtggtggggggcgacagcact
atcccacaaggctgtgcagtggccatcgcctcagataaatgcactgttcacctcatgctg
aggggtttgattgatttggaaaaggaggtcactaaactgacagcgaagaaaggggagctg
gagaaacagatggaaaagatgaaggaaaagatggccaagagtgactacaaggagaaagtc
cctgttaaagtgcaggaggcagatgctgagaagctgaggcagaatgaaacagaactacag
aaagtgaaggaagccattgaaaacttcagaaagatgatgtaa
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