Carassius gibelio (silver crucian carp): 127974842
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Entry
127974842 CDS
T08819
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127974842
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127974842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SCAP
MIOS_WD40
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Cwf_Cwc_15
WD_LRWD1
DUF7160
Beta-prop_DCAF12
Beta-prop_DCAF4
Voldacs
Motif
Other DBs
NCBI-GeneID:
127974842
NCBI-ProteinID:
XP_052434356
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All DBs
Position
B16:complement(14767449..14772249)
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AA seq
448 aa
AA seq
DB search
MSAAGEDTLPREDDEFEDMEASGSDEDDMEGEGQNGDGEGKVYVPGLQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVVRDDEGEGREQFPLSMILCAGTQADTALSNRLIVMRMHSL
HETDKDKDENESSDEESDDDEDEEKKPQLELAMMPHYGGINRVRVTQRGEQTFAALWSEK
GQVEIFDLRPQLEAVHSSAAMSAFIKQQKEATPLFSFSGHMSEGFAIDWSPKVPGRLVSG
DCKKNIHVWEPQEGGTWKVDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRA
PPNSMLSANEAHSSDINVISWNRTEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSAP
VTSVEWNPVDSSVFAASGADDVVSQWDLSVESCDIGEQAEGLKQLPPQLLFLHQGQKEVK
ELHWHPQIPGVLISTALSGFNIFRTISV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggccggtgaagacacgttgcctcgggaggacgatgagtttgaggacatggag
gcgagtggaagcgacgaggatgatatggagggagaaggacagaacggggacggagagggg
aaggtctatgtccccggtctgcagccgcttcagccgggagaagagctggagatggaccgc
tccgcttaccgcatgtatcacgagtgccagaccggtgccccatgtctgagttttgatgtg
gtgcgtgatgatgaaggagaagggcgcgagcagtttcctctctctatgattctgtgtgct
ggtacacaggcagacactgccttaagcaacaggcttattgtgatgcgcatgcacagtctt
catgaaactgacaaagataaagatgaaaatgaaagcagtgacgaagaaagtgatgacgat
gaggacgaggagaagaaaccacagttggagctggccatgatgccacattatggtgggatc
aaccgagtcagagtgacccagcgaggcgaacagacatttgctgcgctctggtcagagaaa
ggtcaggtggagatttttgacctccgacctcagcttgaggcggtgcacagttcggcagcg
atgtcggccttcatcaagcagcagaaggaagccacgcctcttttcagtttttctggtcac
atgtcagaaggatttgccatcgattggtcgcccaaagtaccaggacgcctggtaagcggc
gactgcaagaagaacattcatgtctgggagccacaggagggcgggacttggaaagttgac
caacggcctttcagctcacacagcaagtctgttgaggacctgcagtggtcacctactgaa
gccacagtttttgcgtcctgttcagtggatcagtccattcgcatttgggacataagggca
ccacctaattccatgctctctgccaatgaggctcattcttcagacatcaatgttatcagc
tggaaccggactgaaccttttattttgtctggaggagacgacggcctcctcaaagtctgg
gatttaaggcagttccagtctggtcgtccagtggccagttttaagcagcacagtgctcct
gtgacgtcagtggagtggaaccctgttgactccagtgtgtttgccgcttctggagctgat
gatgttgtcagccaatgggatctatccgtggagtcatgtgacattggagaacaggcagag
ggcttaaaacaactaccacctcagctactgttccttcaccagggccagaaagaagtgaag
gagctccactggcacccacagattcctggagttctcatttccaccgcactgtctggattc
aacatcttcagaactatttctgtttaa
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