Carassius gibelio (silver crucian carp): 127974849
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Entry
127974849 CDS
T08819
Name
(RefSeq) LIM domain-containing protein 1 isoform X1
KO
K16682
LIM domain-containing protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127974849
03036 Chromosome and associated proteins [BR:
cgib03036
]
127974849
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127974849
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
127974849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
127974849
NCBI-ProteinID:
XP_052434363
LinkDB
All DBs
Position
B16:complement(7234723..7276122)
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AA seq
568 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVKRDAGNNPDFEETRKVFASKMTKIHMQKQ
QEEMARNSLAARINGSHSKVSDNTFYTKDRPPINSYRQGGEAAAKPPIMSGPMVGTASVT
PYISYEGQKHNLASLPDGSSNRVYDINETGNAVNPIPVPARSAPSTSPPGTWASRSVYPS
QTPSSPFSNSSSSSSSPGAGQNYSPVSQGFPQTGKSPSQSPTGTYRDAYHQPQQVSPVQH
QLSSAQRPASGPTYQNGVAHNIGTPSPTQVTQFPLSHGGKQGEPSQPKSPAPGNLTVPAA
TPVESPHDESSSPSRALKLPCQTLHVQTDQGPSAAEIKLEALTERLEKEMDAQPKAEYFG
SCVKCSKAVYGASQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVCGKVFCEEDFLYSGF
QQSADKCNVCGHLIMDMILQALGKSYHPGCFRCAICNESLDGVPFTVDTDNKIYCVKDYH
RVLAPKCAACNQAILPSEGSDETIRVVSMDKDYHVQCYHCEDCHMELNDEEGHRCYPLDG
HLLCHGCHLKHMDPAAPLSTANSYHSQF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttgggacttgaggcgagtaaattcatcgaggacttgaacatg
tatgaagcatcgaaggacggcttatttcgcgtgaagagagatgcgggaaacaacccggat
tttgaagaaaccagaaaagtcttcgcttcaaagatgaccaaaatacacatgcagaagcag
caagaggagatggcaagaaacagtctggcggcaagaatcaatggaagtcactcgaaagtg
tcagataacacattttacaccaaagacagaccacccatcaatagttatagacagggtggt
gaagcagcagccaaaccacccatcatgtctggaccaatggttggcactgccagtgtgact
ccatacatatcttatgaaggacaaaagcataatttggccagtttacctgatggatccagc
aacagggtatatgacattaatgagactgggaatgctgttaacccaataccagttccagcc
cgatcggcaccttctaccagcccccctggcacatgggcatcaagaagtgtttacccgtct
cagacaccatcatctcctttctccaacagttcctcctcttccagctcacctggagcaggt
cagaattattctccagtgtctcagggattccctcaaacagggaagtctccctctcagtcg
cccacaggaacatacagggatgcatatcaccagccgcaacaggttagccctgttcagcac
caactaagctctgcccagaggcctgccagtggaccgacatatcaaaatggggtagctcat
aatattggcaccccctcccctacccaggtgacacaatttccattgtctcatggagggaag
caaggtgagccatcccaacccaagagccctgcacccggtaacctgacagtgcccgctgct
acccctgttgagtcgccccatgatgagtcttccagcccttctcgggcgctcaagctgcca
tgccagaccctccatgtacagacggatcaggggccatctgcggctgaaataaaattagaa
gctctaactgaacgcctggaaaaggagatggacgcccagccaaaggctgagtactttggc
agctgtgtgaagtgcagcaaggcagtgtatggagcgagtcaggcgtgtcaggccatgggc
agcctgtaccacgacagctgcttcacctgcagcgcttgcagtcgaaagctgagagggaaa
gccttttactacgtctgtgggaaagtcttttgtgaagaggacttcctgtactctgggttc
cagcagtctgccgataaatgcaatgtatgtggacatttaatcatggacatgatcctgcag
gcgctgggaaagtcttaccacccaggctgtttccgctgtgccatctgtaacgagagtctg
gatggagtgcctttcactgtggacaccgacaacaagatctactgcgtgaaggactatcac
agagttcttgctcctaaatgtgccgcatgtaatcaggcgatcctgccgtctgaggggtca
gatgaaaccattcgagtggtttccatggacaaggactaccacgtgcagtgttatcactgt
gaggactgtcatatggagctgaatgacgaggagggtcaccgctgctatcctctggacgga
cacctgctgtgtcacgggtgtcacctcaaacacatggaccctgccgccccgctgtctaca
gctaacagctaccacagtcagttttaa
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