Carassius gibelio (silver crucian carp): 127974958
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Entry
127974958 CDS
T08819
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03440
Homologous recombination
cgib04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127974958
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127974958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127974958
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127974958
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127974958
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127974958
BRCA1-C complex
127974958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
PCNA_C
Motif
Other DBs
NCBI-GeneID:
127974958
NCBI-ProteinID:
XP_052434551
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All DBs
Position
B16:17433183..17450277
Genome browser
AA seq
835 aa
AA seq
DB search
MWKLQSTESGGESIGLLPGQEYVVGRKNCEILLSNDQSISRVHASLTVTEQAVTLKDSSK
YGTFINGEKLATGSTKMLQTGDKITFGVFQSKFSLVKECVVVCSSCVDNEGKASLSQDLR
SIGGRLVNTWTFDCTHLVMPTVKVTIKTICALLCCRPIVNPEFFSAFSKAVQQKLPLPKA
EKFRPQIDEPSLAKEDVDLTARPERKSLFKGKTFLFLNSKQMKRLSQAVSCGGGVSQLLD
EGSLPISLLESGSTCVVDMTSGNSQALIPPAFKKWGDSVAQILHRKGLRFITESEIGLAA
IHVNNKTYCNPCCSMQSESVKVKPVIAAATLSQNTAVDETALAAPSQNITAYVVNTELSQ
DQSRVVTSGINTVGETPEKTLSKHKESTLSAANKPSSFGPEASTTRIVNETVMSSASFSV
VEPEKRMKKSSASSGRGRVDPEGSVKLTAPPNASTTLKRSPQKQAALTNFFQPAGKKRPR
EDGANSVQSDAKLSRKDSEVKEDEIQQSSSASRSHKTSHTAQNQHSSVSRSEFSASLVQA
CGSSQSSGSKKRKEPEQDSPLAPEKPAEVADLDMSLEELESLMSDEMDEPLQSAANKKQC
LEPGTNSRINNPQLTKQQEDTESKSRKSSKNQQSSANNIQNLQLDRTVSAATNQGSERPS
KRSSNQTPDLEAQSSAKKGKRPELEDVKEEEVSFVVNSRTKNGISQHCEPAVQQEMQAST
SKSESANDPELPRRLLQVQFMSLTVSTSSRSRPGPLQTHDPNDKNVKRFRKKNVPGFNGL
PNIIGGSDLVAYNRSKNSELEEWLRQAAEEEKRNEREEILGDDLFRYNPRLAKKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaactgcagtcaaccgagtctggaggggaaagtatcggtctgctgccgggtcag
gagtatgtggtcggccgcaagaactgtgagatcttgctgtccaatgatcagtccatcagc
cgtgtgcacgccagcctcaccgtcactgagcaggcggtcactctaaaagacagctctaaa
tatggcactttcatcaatggtgagaagcttgcgactggttccacaaagatgctgcagaca
ggagacaaaatcacatttggagtctttcagagcaagttcagtttggtgaaagagtgtgtc
gtggtgtgttcctcatgtgtcgataatgaagggaaagcatccctctctcaagatttgcgc
tctattggggggcgacttgtcaacacttggacatttgactgcactcacctcgtcatgccc
acagtaaaggtcaccataaagacaatctgtgcattgctgtgctgtcggcccatagtgaat
cctgaattcttcagtgcatttagcaaagctgtgcagcagaagctgccgctgcctaaagct
gagaaatttaggcctcagattgatgagcccagtctggctaaagaggatgttgatctgact
gcacgacctgagagaaagagcctcttcaaggggaaaacttttctgtttttgaactcaaaa
cagatgaagcgtttgagtcaggcggtgagttgtggaggtggggtgagccagcttttggac
gagggctctttgcccatttcactcttggagtcaggcagcacctgtgtggtggacatgaca
tcagggaactcccaggctctgatccctccagccttcaagaagtggggggattctgtggcc
cagattctgcacagaaaaggcttgcgctttatcactgaatctgagattggattggctgcc
attcatgtcaataataaaacatactgcaatccctgctgttctatgcaatctgaatcagtg
aaagtgaaacccgtcatagctgcagcaacgctttctcagaacactgctgtcgatgagacg
gcactcgcggcaccttcccagaatatcacagcctatgtggtcaacactgaactctctcag
gaccagagcagggtggttacaagtgggatcaatacagttggtgagactccagagaagaca
ctctccaaacacaaggaatccacactgtcagcagcaaacaaaccctcatccttcggccca
gaagcttccactactcgcattgtcaatgaaaccgtgatgtcatctgcaagcttcagcgtg
gttgaacccgagaagaggatgaagaaaagttctgcttcctctggcagggggcgagttgat
cctgaaggttctgtgaaattgacagcacctccgaatgccagcaccacactaaaacggtct
ccccagaaacaggcagccctcacaaacttcttccagcctgccggcaagaaaaggccacgt
gaagacggtgccaattctgtccagtcagatgccaaactctccagaaaagacagtgaggtt
aaagaagatgagatccagcaaagttcctctgccagtagatctcacaaaacctcacataca
gcccaaaaccagcacagctcagtgtcacgatctgagttcagtgccagtctggttcaggct
tgtgggtccagtcaaagctctggcagcaagaagagaaaggaaccagagcaagactcccca
ttggcccccgagaaacctgcagaagtcgctgatttggatatgtcacttgaagagctcgag
tccttaatgtccgatgaaatggatgagcctctgcagtccgcagctaataaaaaacaatgt
cttgagccaggaacgaacagcagaatcaataacccacaattaacgaaacagcaagaggac
actgagtccaaaagcagaaaaagctcaaagaaccagcaaagcagtgccaacaatattcag
aacttgcagttggacagaacagtctcggctgcaacaaatcaaggctctgagaggccatca
aagaggtcatccaatcaaacgccagatctggaagcgcagagttcagcaaagaaggggaaa
agaccagaacttgaagatgtcaaagaagaggaagtgtcatttgttgtgaattcaaggacc
aaaaatggcatttcacagcattgtgagcctgcagtccaacaggaaatgcaggcttcaacc
tctaaatctgaatctgcgaatgaccctgaactgcccagaaggctcctacaggttcagttc
atgtccctgactgtgagcacctcttccagatcaagacccggtccactgcagacccatgac
cctaatgacaagaatgtgaaaaggttccgcaagaaaaatgtccctggatttaatgggctg
cccaacattatcggaggctcggatctggtggcttacaatcgcagtaagaactctgaactg
gaggaatggctcagacaggcagcagaggaggaaaaacggaatgaacgggaggagattttg
ggagatgatttgttcaggtacaaccctagactggcaaagaaaaaataa
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