Carassius gibelio (silver crucian carp): 127975105
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Entry
127975105 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127975105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127975105
03021 Transcription machinery [BR:
cgib03021
]
127975105
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127975105
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127975105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127975105
NCBI-ProteinID:
XP_052434854
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All DBs
Position
B16:complement(16079277..16116398)
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AA seq
680 aa
AA seq
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MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSDIRMSKPIEVENPAADSPMEGTDSERN
GSDSNNQVQPMKISPFSLSPTLSSSSKTKVEDCGEMSPAAVQTPPAQTPLPHTQLMLTGG
QLAGLTALLPAQQQLLLQQAQLLAAAVQQSHVAHAASQQQAQQQAAQPQSQGHSQSTQEQ
NATPVPPPPPPHQLPLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSPAQFLLPQTQQGQQ
GLLSTPNLIPLPQQNQGSLLAAPHRLSLQAQREKVADSSVNTVTPVSTHPEEPSDLEELE
QFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKW
LNDAETMSMDSTLPSPSALSSPSLGFEGLPGRRRKKRTSIETNVRVALERSFITNQKPTS
EEILFIAEKLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMP
SQGPSQTVSRLGTPVCPLTQNGPSLSSAPSPVTPPPRNDASPAPPTHSTLSVNTGSWHKK
NGDVSNYINDFAAYLRNMVRGVNTGMNQALLGCNPLATIQALAASGGQLPISSLEGSSKV
LIGGSGGQGAGLPSSLFLNHSSLLPMASGTGMGLGSSALAKTSFPLTGGMSPSPCSSPIS
SCSSGDLLHSPHSIGGAKIE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctctgccggtgccgtttgtcttgccgagaactgcctctgatctccacgcc
tggcgcctcaagtccccgctggctctgcgctctcactccgatatcagaatgtcaaagcca
atagaggttgagaatccagcggcagactctccgatggagggcacagactcagaaagaaat
ggctcggattcaaataatcaggttcagccaatgaaaatcagccctttctctctttccccc
acactgagcagcagcagcaagactaaggtggaggattgtggtgagatgtctcccgctgct
gtacaaactccacctgcccagacgccccttccccacacacagctgatgctaacgggtggt
cagctcgcagggttgactgcacttttgccagcacagcaacagctgctcttacagcaggcg
cagctcctcgctgcagctgtgcagcagtcgcatgtggcccacgcggccagtcaacagcaa
gcccagcagcaggcagctcaaccgcagtcacagggccattcacagagcacacaggaacaa
aacgccacccctgtcccgccgcctcctcctcctcaccagcttccgctttctcagccaatc
cagctcactgcgcaggacattcagcagttgttgcagctgcagcagctggtcctggttcca
ggacacactctgccttcacccgcacagtttcttttaccacaaacacagcaagggcagcaa
gggctgctatcaacaccaaatctaattccactacctcagcaaaaccaaggaagcctgctg
gccgctccacacagacttagtcttcaagcacagagggagaaggttgcagacagcagcgtg
aacacagtgactccggtgagcactcatcctgaggagcccagtgatctggaggaactggag
caattcgcccgcacattcaaacagaggaggatcaaactgggattcacacagggtgatgtg
ggattggccatggggaagctctatgggaatgatttcagtcagaccaccatctctcgattt
gaggcgctcaatctcagcttcaagaacatgtgcaaacttaaacctctgttggagaagtgg
ctgaacgacgcagaaacaatgtcgatggacagcaccttgccaagtcccagtgctctttcc
tctccctcgctgggcttcgagggcttgcctggccgccgtaggaagaaacgcaccagcatt
gagaccaacgtccgcgtcgctctggaacgcagcttcatcacgaaccagaagcctacctca
gaggagatcctgttcatcgccgaaaagctcaacatggagaaggaggtgatccgcgtctgg
ttctgcaaccgccgacagaaagagaaacgtattaacccctccagtgccacccctcccttg
cccagccaaccccagcccacctcgcacaaacccccctgctacagcccgcacatgatgccc
agtcagggaccatcacagacagtgagccgtctcggtacaccagtttgccctttgacccaa
aatggaccctccttaagctctgcaccatctcctgtgaccccgcctccccgcaatgatgcc
agtcccgcccctccgactcacagtacactaagtgtgaacacaggttcatggcataaaaag
aatggtgacgtttctaactacatcaatgactttgctgcatatttgaggaatatggtgagg
ggagttaacacaggaatgaaccaagctcttcttggctgcaacccacttgctactatccaa
gctctagcagccagtggtggccagctgcccatttccagtcttgagggaagcagcaaggtg
ttaattggtggttctggaggccaaggagcaggtctcccctcttccctctttctcaaccac
tcctctttgttgcccatggcatcaggcaccggcatgggattgggcagttcagctcttgcc
aaaacctcatttcctctcacaggcggcatgagtccctccccttgctccagccccatctct
tcctgctcttccggcgatttgctacatagcccacactcgattggaggggctaaaatcgag
tga
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