Carassius gibelio (silver crucian carp): 127975125
Help
Entry
127975125 CDS
T08819
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127975125
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127975125
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
127975125
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127975125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
USP7_C2
PDZ_2
DarA_N
Sina_TRAF
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
127975125
NCBI-ProteinID:
XP_052434892
LinkDB
All DBs
Position
B16:17281713..17294844
Genome browser
AA seq
572 aa
AA seq
DB search
MADVVEGDGSRSSGPSMLPSAVRNGSGMCSGTCAGGLVATTVTSGPRWVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVVQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLSDNELAISYCFHQALDDVKRGFIKVGEKSYQLQKLTEQRKMTMYL
GILRTCEGYNEITFPHCSCDSRRKGHVVTAISIHHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWGKEVEEEATDKD
NKNCSKDGMCEYLPTVETQKGWRHMNEEIISS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagacggcagtcgctcctctggtccttccatgcttccctcg
gcggttcgcaacggctctggcatgtgctcgggaacgtgcgccgggggcctggtcgcgacc
acggtcacctccgggcctcggtgggtccgcatcgtcaagtcggactcgggctatggcttc
aatgtccgcgggcaagtaagcgaaggagggcagctgaggagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggctgtcctgtcggtt
cctcagccagagacggacagccttgatcccggggacgatggctcatcgcaatcctgctat
gattacagtgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggaacag
aatggagagaagtttgtggtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttgccaactttgca
tttcccaagctgccagggaaatggcctttctctctgtctgagcaacagctcgacgctcgc
agacgagggctggaggaatacttggagaaagtgtgttctgttcgggtgattggagagagc
gacgtcgtgcaggagtttttgtcggagtctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttaccgtccgagtccgaaagaattgc
acaacagaccaggtctaccaggctgtggtaacaaaaatagggatggacagcattactgca
agttattttgccctgtttgaagtcattaaccactcctttgctcgcaagctggcccctaat
gagtttcctcataagctgtatgtgcagaactatacgtctgccatcccaggcacctgcctc
acgcttcgcaagtggcttttcaccacagaagaagagattctgctcagtgataatgagctg
gccatcagctattgctttcatcaggctctggatgatgtgaaaaggggattcatcaaagtg
ggagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
ggtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgcaggaaaggtcacgtggtcactgcgataagcatccaccactttaaactccatgcg
tgcacagaggatggcactctagagaatcaggtgatagcttttgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtatgcgcgaggggagaag
aaacctcgctgggtcaaaatctttactccatatttcaactacatgcacgagtgcttcgag
agagtcttctgtgagctaaaatggggaaaggaggttgaagaggaggccacagacaaggac
aataagaactgcagtaaagatggtatgtgcgaatatcttccaactgttgagacacagaag
ggatggaggcacatgaatgaagagatcatctcctcttga
DBGET
integrated database retrieval system