KEGG   Carassius gibelio (silver crucian carp): 127975125
Entry
127975125         CDS       T08819                                 
Name
(RefSeq) sorting nexin-27b isoform X1
  KO
K17936  sorting nexin-27
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127975125
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cgib04990]
    127975125
Membrane trafficking [BR:cgib04131]
 Protein recycling
  Others
   Others
    127975125
Domain-containing proteins not elsewhere classified [BR:cgib04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   127975125
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 RA_2 SNX17-27-31_F1_FERM SNX17_FERM_C USP7_C2 PDZ_2 DarA_N Sina_TRAF SNX17-31_F2_FERM
Other DBs
NCBI-GeneID: 127975125
NCBI-ProteinID: XP_052434892
LinkDB
Position
B16:17281713..17294844
AA seq 572 aa
MADVVEGDGSRSSGPSMLPSAVRNGSGMCSGTCAGGLVATTVTSGPRWVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVVQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLSDNELAISYCFHQALDDVKRGFIKVGEKSYQLQKLTEQRKMTMYL
GILRTCEGYNEITFPHCSCDSRRKGHVVTAISIHHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWGKEVEEEATDKD
NKNCSKDGMCEYLPTVETQKGWRHMNEEIISS
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggcagatgttgtcgaaggagacggcagtcgctcctctggtccttccatgcttccctcg
gcggttcgcaacggctctggcatgtgctcgggaacgtgcgccgggggcctggtcgcgacc
acggtcacctccgggcctcggtgggtccgcatcgtcaagtcggactcgggctatggcttc
aatgtccgcgggcaagtaagcgaaggagggcagctgaggagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggctgtcctgtcggtt
cctcagccagagacggacagccttgatcccggggacgatggctcatcgcaatcctgctat
gattacagtgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggaacag
aatggagagaagtttgtggtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttgccaactttgca
tttcccaagctgccagggaaatggcctttctctctgtctgagcaacagctcgacgctcgc
agacgagggctggaggaatacttggagaaagtgtgttctgttcgggtgattggagagagc
gacgtcgtgcaggagtttttgtcggagtctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttaccgtccgagtccgaaagaattgc
acaacagaccaggtctaccaggctgtggtaacaaaaatagggatggacagcattactgca
agttattttgccctgtttgaagtcattaaccactcctttgctcgcaagctggcccctaat
gagtttcctcataagctgtatgtgcagaactatacgtctgccatcccaggcacctgcctc
acgcttcgcaagtggcttttcaccacagaagaagagattctgctcagtgataatgagctg
gccatcagctattgctttcatcaggctctggatgatgtgaaaaggggattcatcaaagtg
ggagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
ggtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgcaggaaaggtcacgtggtcactgcgataagcatccaccactttaaactccatgcg
tgcacagaggatggcactctagagaatcaggtgatagcttttgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtatgcgcgaggggagaag
aaacctcgctgggtcaaaatctttactccatatttcaactacatgcacgagtgcttcgag
agagtcttctgtgagctaaaatggggaaaggaggttgaagaggaggccacagacaaggac
aataagaactgcagtaaagatggtatgtgcgaatatcttccaactgttgagacacagaag
ggatggaggcacatgaatgaagagatcatctcctcttga

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