Carassius gibelio (silver crucian carp): 127975183
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Entry
127975183 CDS
T08819
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04514
Cell adhesion molecules
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127975183
04514 Cell adhesion molecules
127975183
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127975183
09142 Cell motility
04820 Cytoskeleton in muscle cells
127975183
04810 Regulation of actin cytoskeleton
127975183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127975183
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin alpha subunits
127975183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
127975183
NCBI-ProteinID:
XP_052434992
LinkDB
All DBs
Position
B16:19536934..19604693
Genome browser
AA seq
1049 aa
AA seq
DB search
MHPCSFRVCFRVFLLIFAILGEAAPFNLDLEKPAVYNGPEGSYFGYSLDFYHPTQDRNVM
SVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFK
SHQWFGASVRTHKDKVVACAPLYHWRSVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKNILRKVQG
EKQTVAASDAYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINATNLTFIQN
FTGEQMASYFGYTVAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDALLF
SPPITLTGTHLFGRYGSAIAPLGDINQDGYLDMAIGAPFAGEDRGGRVFIYNGQKSGLML
QASQVLKGDWASSAVPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRARPVVTVDA
QLILTPRILNPEDKSCRMPNSDDMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFMDSHQHQRTQQLVLGQGDRQHCHNYSVYLRDEGEFRDKLSPISVTLNYSLDQN
SPPPGLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDRTELLIGDDNFLM
LTINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRVVVCDLGNP
MVADTNLSVGLRFSVQRLEDAPPTIGFELQIHSSNKDNSRSVPVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDDVGPQVQHIYELHNKGPSSISRTVLEVGLAQSVFHE
EHLLYLLQIVTDGPVHCSVNGSLNPLNLETSSLQDTPELLGFLKNSSTPNRHRRSVSTAQ
SYNSKILNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQ
VMAMPYRIKADSLPHQSKSIGTFVVWAIPDVSFAIPLWVIILAILLGLLVLAMLSLAMWK
CGFFDRARPPKDDDVSDREQLTSEKSTDA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcacccttgttctttccgcgtgtgttttcgtgtgtttttgctcatatttgcaattcta
ggcgaagctgcacctttcaacctggatttggaaaagccagcagtttacaatggaccagag
ggaagttattttggatactcactggacttttaccacccaacacaggatagaaatgtcatg
tcggttctagttggggctcctaaagcgaacacctctcagccagggattgtggagggagga
gcggtgtactactgcccctggccggcatcagacccagactcctgccgccagatccccttt
gataaagcaaataaccgaatgattaaagtgaacgggacaagggagcctctagaatttaaa
tcccatcagtggtttggagcctcagtcaggacccacaaagacaaagtggtggcttgtgcg
cccctctatcactggaggtcagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtgcagaacttcagtgcctatgctgagtattctccatgtcgaaccaataac
ccggaccccgagggccagggcttctgccaggcgggcttcagcgttgattttactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggtgttgcagaaatattaaacggctattccctgaaaaatattctgcgcaaagttcaggga
gagaagcagacggtggctgcatcagacgcatatgatgacagttacctaggctactctgta
gcagtcggagagttcacaggtgattcggaacaagaactggtagcaggggtacctcgaggg
gctcacaactttggttatgtggctgtgatcaatgcaacaaacctgacttttattcagaat
tttactggggagcagatggcctcttattttggatacaccgttgcagtgactgatctaaat
ggagatgggctagatgacgtactagttggagctccactctacatggaccgtgagtttgag
agtaaacctcgtgaggtgggccgtgtgtacttgtatttgcaagaggacgcgcttctcttc
tctcctccaatcacactcactggaacgcacctgttcggccggtatggaagtgccatcgcc
cctctcggagatatcaaccaggatggctaccttgacatggcaataggagctccgttcgca
ggagaggatcgtggtggcagggtcttcatttataacgggcaaaaatctgggctgatgtta
caggcatctcaagtgctgaaaggcgactgggcctcatccgctgtcccagcaggcttcgga
ttcaccctgcgtggagattctgacctcgataacaaccagtaccctgatttgctggtcggt
gcatttggagtgagtaaagttgtggcctacagggcaaggccagtggtcacggtggacgct
cagctaattttgacacccagaattctcaaccctgaggacaagtcctgccgcatgcccaat
tctgatgatatggtaacctgtctgtcagtaaatgtgtgcgcaaagatctctgggattggt
attcctgattatgtagctctaagaatggacctgcagctggactggctgaagcagcgtgga
gcagttaagaggatcttgttcatggactctcaccagcaccagagaacccagcagttggtt
ctgggtcaaggggaccgccaacattgccacaactactctgtttacctgcgggatgaggga
gagttcagagataaactgagtcctatcagcgtgacgctgaactacagtctggaccagaac
tctcctccacctggcctacagctgcggcccattttggaccactacagcaagaccttccac
catgagcaggccaacatcctgttggactgtggagaagacaacatgtgcatcccagatctc
aaattgtctgctaaaatggaccggactgaacttttaatcggggatgacaactttcttatg
ttgaccattaatgcagccaatgagggcgagggggcgtatgaggcagagcttcatgtgacc
ctcccaccagaggcagactatattggtgtggagcgcagacgtgaggatcttcagcgactg
aactgtgagcaccggacagagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgacacaaacttatcggttggtttacggttttctgtgcagcgactggaagat
gcccctcctaccattggctttgagcttcagatacacagctctaataaagacaactcaaga
agcgttccagtgaacttgactctgagcattgcagcgagagcacaggtggagatccgaggt
gtgtctcacccagctcaggttgttttaccattccctcgatgggaacccaaagagaaacct
gtacgagaggacgacgtcggccctcaggttcaacacatatatgagttacataataagggt
ccgagttcaataagcaggactgtgttggaggtagggctggcccagtccgttttccatgag
gaacacctcctttatctccttcagatcgtcactgacggtccagtgcactgcagtgtcaac
ggctccctaaacccactgaatttagagacctccagtcttcaggacactccagaattactg
ggctttctgaagaacagcagcactccgaatcgccatagacgatctgtttctacagcccag
agttacaacagcaagatactgaactgctcaaatatcaactgcctgatggtggagtgtgtt
gtggaccgcttggatcgaggccaaagcgcagtgatcaagttcagatctcgactctgggct
cacaccttcttacagagacggaatgaccactacacgctgaactccacagtgtcctttcaa
gtgatggccatgccttatcggatcaaagctgattcactcccacaccagagcaaatcaatt
ggcacatttgtggtgtgggccattcctgacgtttcctttgccattcccctgtgggtaata
attctggccatactgctgggattgctggtgctggctatgcttagcctagcaatgtggaag
tgtggcttctttgatcgagcgcggccacccaaagatgatgacgtgtcggaccgtgagcag
ctgacctcagaaaaatccacagacgcgtga
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