KEGG   Carassius gibelio (silver crucian carp): 127975234
Entry
127975234         CDS       T08819                                 
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127975234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127975234
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127975234
 Complex B
    127975234
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 127975234
NCBI-ProteinID: XP_052435078
LinkDB
Position
B16:complement(15156652..15169529)
AA seq 481 aa
MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDQDRKRRSRDRERRGGSRDRHGDS
KDRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPE
GLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLCQAPGNPVLA
VQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPG
TSLFCSPNSCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL
SKGYAFCEYVDVNISDQAHCLLSQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTP
VTLQVPGLMNSSVTQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVKDECSKYGQVKS
IEIPRPVDGVEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRREF
W
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtccgattttgacgagtttgagagacagctgacagaaaacaagcaagcggatagagac
aaggagaacaagcaccaccggcgcagtggctcgagaagtcgcagcagagaccaggacagg
aaaaggaggagccgagacagagaaaggagaggaggcagccgagatcgtcatggagacagc
aaggaccgcagacacagacgcagtcgctctccgcaccgtgagaagaaaaagattaaagta
aaaaaatattgggatgttcctcctcctggatttgagcacatcacacccatgcagtacaaa
gccatgcaggctgctggtcagatcccggccactgctctgctacccacaatgacccccgag
ggtctggctgtgaccccaacacctgttcctgttgtgggcagtcagatgactcgacaggcc
cggcggctttatgtcggcaacatcccatttggcatcacagaggagtctatgatggacttc
ttcaatgctcagatgcgtttgggtggcctgtgtcaggctccaggtaacccagtccttgct
gttcagatcaaccaggacaagaattttgcctttttggagtttcgttcggtggatgaaacg
acacaggccatggcatttgatggcataattttccagggacagagtttaaagattcgtcga
ccacacgactaccagcctctgccaggcatgagtgagaatcccagtgtctatgtcccaggc
acgtctctcttttgctcccccaattcttgcgtcgtctccacggtcgtgcctgattcggcc
cataaactcttcattggcggtctgccaaattacctcaacgatgaccaggtcaaggagtta
ctgacatcatttggcccactgaaggcctttaatttagtgaaagacagcgcaacaggcctc
tctaagggctatgccttctgtgaatacgttgacgtcaatatcagtgaccaggcacactgt
ttactatcacaggccatcgcggggctaaacgggatgcagctgggtgacaagaaactcctg
gtccagagagcaagcgtcggctccaagaacaccacactgactggtataaaccagacacca
gtcacccttcaagttccaggtctcatgaacagctcggtgactcagatgggtggcattccc
acagaagtattgtgtctgatgaacatggtggctccagaggagctgctggatgatgaagag
tatgaggagatcgtggaagacgtcaaagacgagtgctccaaatacggccaggtcaagagc
atcgagatcccacgtcccgttgatggcgtggaagttcctggcactggaaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggcaatgcaaggcttaacaggaaggaaattc
gccaacagagtggtggtgactaaatactgcgaccctgacgcctaccaccgccgcgagttc
tggtag

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