Carassius gibelio (silver crucian carp): 127975258
Help
Entry
127975258 CDS
T08819
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127975258
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
127975258
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127975258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
TRM5-TYW2_MTfase
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
127975258
NCBI-ProteinID:
XP_052435130
LinkDB
All DBs
Position
B16:12421381..12428331
Genome browser
AA seq
733 aa
AA seq
DB search
MGRRLDPTTKVKRGPGRKARKQKGAETELNKFLVDEDGPKKLSSRARKRAVKRAQVTKEP
KQEEKPKKGFSDENNKWLKPAQRKRKIEQSEEGEDSDSQWEEEDDDDDNEEGLNNKEMEE
EDDDDEDMVDDYGADEGDDQDSDGEELLPIEKAARKQKKQTGVKPESDDDDDDEEEEEEE
EKEDLKEDEDEEDTVQANIDETEQFKLPGAADRAKEGLLAMDLQTIHQRIKDNVDVLSHF
SEKREEGKERSEYLSLLRSDLCTYYSYNEFLISKLMDLFPLSELIDFLEANEIQRPVTIR
TNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGQYMLQGASS
FLPVMALSPQEGESVLDMSSAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIHRLG
VTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADILRSAHLQKE
LILSAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGNEGFTR
FKEKRFHPSLKLSRRFYPHSQNMDGFFVAKLKKLSNTIPTAPKETGDEAESTKMETAASS
EQVQKPEPKQQKPTSNPEKSKMGKKQKLKQKKSEPAIITKKTGVKSENKKSDGPKGAKIP
KLDEAASKKSEKPDKKQKVKELNGDSTKEVGKEKKEKSQLEKKKNKMQRKKLLKNKNRMG
KNKFRKLKNVLGH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaggttggaccccaccaccaaggtgaaaagaggacctggacgtaaggccaga
aaacagaagggagcagaaactgagctgaacaagtttttggttgatgaggatgggccaaaa
aaactttcaagcagagcgagaaaacgagctgtaaaaagagcccaagtgactaaagaacct
aaacaagaggaaaagcctaagaaaggattctcagatgagaataataaatggcttaaacca
gcacagaggaagcgaaagattgaacaatctgaagaaggtgaagacagtgacagccaatgg
gaagaagaagatgatgatgatgataatgaagagggcttaaataacaaggaaatggaggaa
gaggatgatgacgatgaagatatggtggatgactatggtgctgatgaaggcgatgatcaa
gacagcgatggagaagagcttctgccaattgagaaagctgcaagaaaacagaaaaaacaa
acaggcgtgaaaccagagagtgatgatgatgatgatgatgaggaggaggaggaggaagaa
gaaaaggaagatttaaaggaagatgaggatgaagaggatactgtacaggcaaatattgac
gaaactgaacaattcaaactcccaggtgcagcagatcgagcgaaggagggtcttttagcg
atggacctacagaccatccatcagaggatcaaagataatgtggatgtgctgtctcacttc
agtgagaagagagaagagggtaaagagagatcggagtatctctctctgctgcgctctgac
ctctgcacctactacagctacaacgagttcctcatcagcaaactcatggaccttttccca
ctctctgagctgattgattttcttgaggccaatgaaattcagaggccggtcaccatcaga
accaacaccctgaaaaccaggaggagagacttggctcaggctctgattaacagaggagtc
aacctggatccattggggaaatggtccaaagtgggcctggttatatatgactcttctgtt
cccataggagcaactcctgaatatctggcaggccagtacatgttgcaaggtgcatcatca
tttctgcctgtaatggcgctttcgccccaggagggggagtcagtgctggacatgagctcc
gctccaggaggcaagaccacttatatggctcagctcatgaggaacacaggcatgattgtg
gctaatgatgcaaatgcagacagactgaagagcgtggtgggaaacatccatcgtctcggt
gtcactaacgcggtcatctgcaactatgacggcagacagttccccaaggtgatgggaggt
ttcgatagagtgcttttagatgctccttgctcgggtaccggagttatctctaaagatcca
ggagtaaaaaccggcaaggatgaggctgatattcttcgctcggctcacctgcagaaggag
ctcatcctgtctgctatcgactctgtcaatgctgattctccaactggcggataccttgtt
tactgcacatgctctattatggtagaggagaatgagtgggtggtggactatgctttgaag
aagagaaatgtaaagctggtccccactggactagactttggcaatgagggattcaccaga
ttcaaagaaaaacgtttccatccctctcttaaactctctcgccgattctaccctcactcc
caaaacatggatggattttttgtggccaagctaaagaagctgtctaacaccatccccact
gccccaaaagaaacaggagatgaagcagaatctactaaaatggagaccgcagcctcatcc
gagcaggtccagaaaccagaacctaagcaacagaagcccacttcaaatccagagaaaagc
aagatgggcaagaagcagaaattaaaacagaagaaatctgagccggccatcatcacaaag
aaaaccggagtgaaatctgagaataaaaaatctgatggtcccaaaggggccaaaatccca
aagttggatgaagcagcatccaaaaagagcgagaagcctgacaaaaagcagaaggtaaag
gaactgaatggagattcaacaaaagaggtagggaaggagaagaaagagaaaagccagttg
gagaaaaagaaaaacaaaatgcaaaggaagaaattgttgaagaataaaaacagaatgggg
aaaaacaagtttaggaagttaaaaaatgtgcttggacactga
DBGET
integrated database retrieval system
