Carassius gibelio (silver crucian carp): 127975271
Help
Entry
127975271 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127975271
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127975271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
U-box
zf-RING_6
zf-RING_5
ANCHR-like_BBOX
zf-RING_10
KinB_sensor
Sirohm_synth_C
DUF2114
LcrG
Motif
Other DBs
NCBI-GeneID:
127975271
NCBI-ProteinID:
XP_052435152
LinkDB
All DBs
Position
B16:30884423..30893898
Genome browser
AA seq
535 aa
AA seq
DB search
MAEARFSQDEFMCSVCLDLLKDPVTIQCGHSYCKSCITDCWDREDQMRVYSCPQCRQTFS
PRPDLSRNTMLAEVVEKLKKTKRPADCDAEAGDVQCDVCTGGKYRAIKSCLMCLNSYCQN
HLEQHESLFKGKRHNLTEATGRLQEMICQKHEKILEIFCRTDQKCICVLCIDEHKNHETV
SAAAQRTENQKQLMKMRRRFQHRIHKRKKGLQQLRETHKSHKRSAQRAMKDSERIFTELI
RSIKRSRSEVKQLIRDQEKTAVSRAEGRLEQEINDLRRRDTELEQLSHTQDHIQFLQSFQ
TFSASHESTEGNDDPFISLLSSDDLRESVHQLRDKLEDVCKEKIKKISDRVTFIKTRNNF
LQYSRQFTLDPNTVNKLLGLSENNRVISNTETDQSYPDHPDRFDVSQVLCRESVCGRCYW
EIEWSGDYGVLISVSYQSIIRKGRIDESRFGQNDHSWSLFCSPYSYSFRHNNIQTALPIK
SISSRTGVFVDHRAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFWVNTGSSVKLC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaagattttctcaggatgagttcatgtgttcagtttgtctggatctgctg
aaggatccagtgaccatccagtgtggacacagttactgtaagagctgtattacagactgc
tgggatcgggaggatcagatgagagtctacagctgtcctcagtgcagacagaccttcagt
ccaagacctgatttatctagaaacaccatgctggctgaagtggtggagaaactgaagaag
accaaacgtcctgctgactgtgatgctgaagctggagatgtgcagtgtgacgtctgtact
ggaggaaaatacagagccatcaaatcctgtctgatgtgtctgaactcttactgtcagaat
cacctcgaacaacatgagagtttgtttaaaggaaagagacacaatctgactgaagccact
ggacgactgcaggagatgatctgccagaaacatgagaagatccttgagatcttctgtcgc
actgatcagaagtgtatatgtgtgctgtgtatagatgaacataaaaaccatgagactgtt
tcagctgcagcacagaggacagagaatcagaagcagctgatgaagatgaggagacggttc
cagcatagaatccacaagagaaagaaaggtcttcagcagctgagagagactcataaatct
cataagcgctctgcacagagagcaatgaaggacagtgagaggatctttactgagctcatc
cgctccattaagagaagccgctctgaggtgaaacagctgatcagagatcaggaaaagact
gcagtgagtcgagctgaaggacggctggagcaggagatcaatgatctgaggaggagagac
actgagctggagcagctttcacacacacaggatcacatccagttcctgcagagtttccag
accttctcagcatctcatgaatctacagaaggaaatgatgatcccttcatttcactctta
tcttctgatgatctgagagaatctgtacatcagctgagagacaaactggaggatgtatgc
aaagagaagatcaagaagatctcagacagagtcacattcatcaagaccaggaacaacttc
ctacaatattcccgtcagttcactctggatccgaacacagtgaataaactcctcggcctg
tctgagaacaacagagtgatttctaacactgaaacagatcagtcgtatcctgatcatcca
gacagatttgatgtgtctcaggtgttgtgtagagagagtgtgtgtggacgctgttactgg
gagattgagtggagtggagattatggtgtgttaatatcagtgtcatatcagagcatcatc
aggaagggacggattgatgagagtcggtttggacaaaatgatcactcctggagtttgttc
tgctccccctacagttactcattcagacacaataacatacagactgctctccctataaag
tcaatcagcagtagaacaggagtgtttgtggatcacagagcaggaactctgtccttctac
agcgtctctgacacaatgagcctcatccacacagtccagaccacattcacccagccgctc
tatcctgggttttgggttaatactggatcatcagtaaaactgtgttga
DBGET
integrated database retrieval system
