KEGG   Carassius gibelio (silver crucian carp): 127975276
Entry
127975276         CDS       T08819                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127975276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127975276
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     127975276
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 127975276
NCBI-ProteinID: XP_052435157
LinkDB
Position
B16:31020924..31034044
AA seq 619 aa
MPEIKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFQVLLVTSSFMSPTESRNGTNTNRVRLFGPNQLVKATA
QEKWDCVKIVCSQPYSKSIAYGVAFIKLHSPPDATDAPVSTPPKLTKLGQFRVKDDSPSS
GSNIQPGSLFFSRDSGAKPSAGLKVSPQNDRLSYAAAALKSEASSTQTSPSSSQQAPVKR
KFEFSKERLEAAGPPPKKPSSSGSSEPNTATPKPKARTGATASPVSSASPAQKTSDKRES
PKSKPEPKPKPKPKPKARSAEPVPFNRILEGCVFVLSGFQNPFRGDLRDKALEMGARYRP
DWTPDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKTKKKISFKRYLMDGAESSSE
SEAEEDESEEEAQKAKTPEKRQMTPKKQPIKEEEDEDGGSTDAEDPEDDGSGMDTEDELN
RVEMESRRKKAAQESTSVQVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYG
KFPDNQKRQLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEEALMENGNLSFVKPTWI
FAINDRQKLLPYQPYTVVP
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaactcaagcatgtcgtgtcatgcagcagtgaagacaatactcacaaa
gcagataatctcctgagctccgacacttataggaaatggaaagctgcgagaccgggagag
aagcaagtttcagtcattcttcagttggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacgtccgtcaaagac
caagactttcaggttctgctggtcacgtcgtccttcatgtcgcccacagagagtcgtaac
ggcacgaacactaaccgcgtgcgtctcttcgggccgaaccagctggtgaaggccacggcg
caggagaagtgggactgtgtgaagatcgtgtgcagtcagccgtacagcaagtcaatagcg
tatggagttgccttcataaagctgcactctcctccggacgctaccgatgctcctgtctcg
actcctccgaaactcactaaactgggtcagttcagagtcaaagacgattcaccctcctct
ggctccaacatccagccgggaagcctgttcttcagcagagacagcggcgctaaacccagc
gcaggactcaaggtgtctcctcagaatgacagattgagttacgccgctgctgctctgaaa
tctgaagcttcgtccacacagacgtctcccagcagctcacaacaggctcctgtgaaaagg
aagtttgagttcagtaaagagcgtctggaagccgccggtccgccgcccaaaaagcccagt
tcatctggttcttctgaaccaaacactgccacaccgaaacctaaagcaagaaccggagcg
accgcgagtcctgtcagcagcgcttctccagcccagaagacatcagacaagcgagagagt
ccgaaatccaagccagagcccaaaccaaaacccaaacccaaacctaaagccaggtctgca
gaaccggtgcctttcaatcgcatcttggagggatgtgtgtttgtcctgagcggcttccag
aacccgttccgcggagacctgagggacaaagcgctggagatgggagcccgataccggccg
gactggacgccggactccacacacctcatctgtgctttcgccaacactcccaaatacagt
caggtgaaagcagccggaggcatcatcgtcaggaaggagtgggtgatggactgccacaaa
acaaagaagaagatctccttcaaacggtatctcatggatggagccgagtccagctcagag
agtgaagcagaagaggacgagagcgaggaggaagcgcagaaagcgaaaacaccagaaaag
aggcagatgaccccaaaaaagcagccgatcaaggaagaggaggatgaggacggaggttca
acagatgctgaagatccagaggatgacggctctggcatggacactgaagacgagctgaac
agggtggaaatggagagcaggaggaagaaagcagcgcaggaaagcacatcagttcaggtg
aaagatgaagatccgtacggcggctctactgatgagaacacagatgctgaggaagaggag
gataaacccatccctgaactaccagacttcctaacaggaaaacggttctatctttacggc
aagttccctgacaaccagaagaggcaacttcagcgctacatcatcgccttcaacggagcc
gtcgaagactacatgagcgagaaggtccagtttgtcatcaccagcgagggatgggacgaa
tcgtttgaggaagccttgatggagaatggcaatctgagctttgtgaaacctacctggatt
ttcgccatcaatgacaggcagaagttgctaccgtaccagccctacaccgtcgtgccttaa

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