Carassius gibelio (silver crucian carp): 127975349
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Entry
127975349 CDS
T08819
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127975349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127975349
03021 Transcription machinery [BR:
cgib03021
]
127975349
03036 Chromosome and associated proteins [BR:
cgib03036
]
127975349
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
ARID
127975349
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127975349
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127975349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
127975349
NCBI-ProteinID:
XP_052435313
LinkDB
All DBs
Position
B16:22468315..22488058
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVASATSLNASPLSELKKPDRDPKEESVPGEKQQENKEPGLESGSPARGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNETTGPEGNNHPGMVHHHAPGFQPASYNYAQHYSR
APFHQHGGQQSPGMAAAAGPGALSSSMMDPYQPNSHDHGFPNHQYNNYSPFGNRSPYPGQ
GYGMNSPRSAPQAQAVGVQSAKQQQSAATASYSNQRYNMGNPQPTSTPTLNQLLTSPSGA
RTYSNYPPSDYSGQDGAKGPADMGSSGGQYGGGHPGWQQRTHHPQPMSPGSTGQPLGRNQ
TPGSMDQMGKMRSQPYGSGGPYSQQPHQGPPPGPQQGSAYPGQVYGPSGPQRYPMGMQGR
VQYGQQMPSYGQQGPGGYVQQGQQPYFGQHGQGPHSGQQQSQYPGPSPGQPGGQGPYSQQ
SHGPQSSGPHGQTGPPYQQPHMPQQPQGQMTGPSPGPSQSPYSQSSAPPQTSLSPYPQQQ
VPQSQPSQQGSSQAPPASQPSYPPAQGPQQQQQQPPPATSQQPPQTPTPASQPPVGHGQM
PQGQPSSYSQNPPQQQQQQQQQSPYQRFPPPPPQEISQESFSSQSSAPPSGPPLTSKSST
EDMQGRPSSLPDLSGSIDDLPTGAEGTLSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPV
GSPASASASRSGPLSPATMPGNQMPPRPSSGQSDGMMQPSMNQPGIGQERGYMQRNPQMA
PYGSPQSNSALSPRQSSGGQVHAGIVPYQQNNSMANYGPQGGQYGPQGYPRQPGYSGMPN
ANYPGPGMGGTVNPMTGQGGGPVFAGMPAGRMPHGQMGARPYGPNMGPNMGPNMSPNMGP
NMGSIPPQVGTGMCPPPGLNRKPQDAALMQHGPTNSIHNRLPGYPNMSPGPGMMGSGPSY
GPSMNNMPGMMNTQGSPYPMGVNMANNTSGMSPGPDFAMDGKLNQAQKMNNKVEGTPKTE
SKSKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLAFIEEKAMGMSNLPAVGRKPLDLF
RLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGED
PPPDIMTGDSKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQL
PPMPSGRSSVNLQDPFADSDFSRRNTMTPNSGYQSGMSTPEMPGRMGPYEPNKDHFSGMR
KVGEQFMPGGQGPNTGLGDQYNRGPPGPMGNMPMGQRHQYPYGPGYDRRPESGMGPDGSI
GPGVPQPNMMTSNAESGMYSPNRYPPQQQRHESYSNQYPGQGAPPGGSYPNQQPGMYPQQ
QSNYKRPGDGGYPPAKRHHDGEMFSGPFNAQQPQPPPQAPPSGPSSGQEMYNQYNSSYPG
SDRRPPGPQNQFPFPFGRDRMQAGTGPNSQGSMPPQMMASPMQSGPDGPQGGMWQGRGEM
GYPGYPNRQGPPTGPGQGPGYHAMNRSEDILPSEPRMNHEGQWPGPRQPPYGPSGAGPPM
SRPLQSNYQPPQAMQNHIPQVSSPTPMPRLMESRTSPSKSAYIPSNIKMQKAGPPVPASH
IVPPSVQPPMMRRDLSFPPGSIEATSPILKPRRRLTMKEIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSISNFNLVQLPGFLELIVEYFRRCLIEIFGILREYEIGDPGQRSL
LDPSVLKTDDNIVDDEVLVEGMEEDGETDEEDEGEEMQRSKHQEQHMAQGPLQIKQEEMP
RTLEDSVKKEDCQGSEGESSAEPKTSEPPSLELDVTQEKPKQASKFDKLPLKIVRKKDPF
VVDCSNKLGRLQEFDSGLLHWSIGGGDTTEHIQTHFESKMDLLHLRKRLPAPVPDRKRGA
QKDNLAPSLPSSSEEHGKEVDRQPSPQSSTEKVTNGISDLRDDRPADCLETASEGTSHIE
KDEEKQVTETTTSENIRSAPPSPSLQGQCPIAVLEDEPHSKDEAPLVTLSDWQDSLARRC
ICVSNIVRSLSFIPGNDSEMSKHPGLLLLLGRLLLLHHRHPERKQAPLTYEKEEEVDESL
GSKKDEWWWDCLEVLRENCLVTLANISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQD
PFPSLGLNGALSPQRLVLETLCKLSIQDNNVDLILATPPFSRLEKLFGNLVHLVGERKVP
VCREMAVVLLANLAQGDSMAARAIAVQKASVGNLLGFLEDSLAATQFQQSQGSLLHMQGS
HFEPTSVDMMRRAARALLALAKVEENHSEFTLYESRLLDLSVSPLMNSLVSHVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacgccagcccgctttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gagccgggactcgagagcggatctccggctcgcggggaactgcaggaccgggccgatgtg
ggaaatgctgggggaggaggggagtcggagatgaagaacggcaacgggaatccgtcgagg
gtgaacaataatcagaatgagaccaccggaccggaggggaacaaccaccccgggatggta
caccatcacgcgcccgggtttcagcctgcttcctataactacgcgcagcactacagccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgagcagcatgatggacccctatcagcccaactcccacgatcacggcttc
ccgaaccaccagtacaacaactacagtccgttcgggaaccgaagcccgtacccgggccag
ggctacggcatgaactctccgcgcagcgctcctcaagcccaggcggtaggggtgcagtca
gccaagcagcagcagtcagcagcgactgcatcttacagcaatcagcggtataacatggga
aacccgcagcctacatccactccgaccctcaaccagcttctcacctcaccgagcggtgcc
cggacttactcgaattacccaccgagcgactacagcggtcaggacggtgctaagggacca
gcagatatgggcagcagcggagggcagtacggtgggggccatccgggttggcaacaaaga
acccatcacccgcaacccatgagtcctggaagtaccgggcaacccttgggtagaaaccag
actccaggctccatggatcaaatggggaaaatgcgcagtcagccttatgggtcgggtggg
ccttactcccagcagccccatcaagggcctcctccggggccccagcaggggtctgcttac
ccaggccaggtctacgggccctctggtcctcagagataccccatgggcatgcaaggacgt
gtgcagtatggacagcagatgccatcatatggacagcagggaccagggggttatgtgcag
caggggcagcagccctatttcggccagcatggtcaggggcctcactcgggccagcagcag
tcacaatatcctgggccttccccagggcaaccaggaggtcagggaccttattcacagcaa
tctcatggccctcagtcatctggcccacacggacagactggtcctccttaccaacaaccc
catatgccccagcagccacaggggcagatgaccggcccttcaccaggcccatcgcagtct
ccatactcacagtcctctgcaccgccccagaccagcctgtctccctatccacagcaacag
gtgcctcagtcccagccctcgcagcaggggagctcccaggctcctcctgcatcccaaccc
agttaccctcctgcccaaggcccccaacaacagcagcagcagccgccgccggcaacatca
cagcagccaccgcagacgcccacacctgcttctcagccgcccgtgggacacggacagatg
ccacagggacagccctcatcgtactcccagaatcccccacaacagcagcagcagcagcaa
caacaatcgccgtatcagcgttttcctccgcctcctcctcaggagatttcccaggagtct
tttagctcccagtccagcgctcccccctccggtccgcctctgacatcgaagagcagcaca
gaggacatgcagggcagaccctccagtctaccagacctatccggctcaattgatgacctg
cctactggtgcggagggcactttgagccctggagtcagcacatctggagtatccagcagt
caaggagaacagagcaatccagcacagtcacccttctcccctcacacttccccaccggtg
ggctctcctgccagcgcctcagcatctcgttctggacccctgtcccctgccacgatgcca
gggaaccagatgcctccccgtccttcaagtggacagtctgatgggatgatgcaaccttca
atgaatcaacctggcattggccaagaaagaggatatatgcagagaaaccctcagatggca
ccctatgggtctccacagtcaaactctgcgttgtctcctcgtcagtcatctggaggtcag
gtgcatgctggaatagtcccttatcagcagaataactctatggcaaactatgggcctcaa
ggtggtcaatatggcccacagggttaccccaggcagcctggttacagtggcatgcctaat
gccaattacccgggccctggcatgggcggaaccgttaaccctatgactggacaaggagga
ggaccagtgtttgctggcatgccggctggaaggatgcctcacggacagatgggtgcacgt
ccctatggccccaacatgggtcccaacatgggtcccaacatgagtcccaatatgggtccc
aatatgggcagcattccccctcaagtgggaactgggatgtgcccacctccaggactcaac
agaaagccacaggatgccgcattaatgcagcatggacccaccaactcgatacacaacagg
ctaccaggttaccccaatatgtctcctggtcctggtatgatgggctcaggaccttcatat
ggcccttccatgaacaacatgcctggaatgatgaatacccagggttccccctatcctatg
ggtgttaacatggctaataacactagtggcatgtcccctggtccggactttgctatggat
gggaaacttaaccaagcccagaaaatgaataataaagttgaggggacacccaagacagaa
tcaaaatccaagaagtcaagttcctccacaacaaccaatgagaagatcactcggttgtat
gaactaggcccagagccagaaagaaagatgtgggtagaccgatacttggctttcatagaa
gaaaaagctatgggcatgagtaacctgccagcggtgggacgcaagccccttgatctcttc
cgcctctacgtgtctgtcaaggagattggaggtcttacacaggttaataagaacaaaaaa
tggagagagttggccacaaatctgaatgtggggacctccagcagtgctgccagctctctg
aaaaagcagtacattcaatgtctgtatgcttttgaatgtaagattgagcgtggagaagac
ccgccacctgacattatgactggagatagcaaaaagaaccaggccaagattcagcctccc
tccccagctggatccggctctcttcaggggccccagacgccacagtccaccagcagttcc
atggcagaaagtggagacttgaaacctcctactcctgcctccaccccacacagccagttg
cccccaatgccaagtggcaggagcagtgtgaacctgcaagatccatttgctgacagtgac
ttctctcggagaaacactatgacgccaaactctggctaccagtcaggcatgagcaccccg
gagatgcctggtcgtatgggaccctatgaacccaataaagaccacttcagtggtatgcgt
aaagttggagaacagtttatgcctggtgggcagggtcccaatacaggtctcggtgatcag
tacaacaggggaccaccaggccctatgggaaacatgcccatgggccagcggcaccagtat
ccatatggccccggctatgacaggagaccagagtcagggatgggcccagatggcagcatt
gggcctggagtgccacagccaaatatgatgacttcaaatgcagaatctgggatgtattca
ccaaatcgttaccctccacagcaacagcggcatgagtcctatagcaatcagtatcctggt
cagggtgcacctcctggtggctcctatccgaatcagcagcctggaatgtacccgcaacaa
caatctaactacaaaagaccaggtgatggtggttacccaccagctaaacggcatcatgac
ggtgagatgttcagtgggccattcaatgctcagcagccacagccaccgccacaggctccc
cctagtggtccctcaagtggtcaggaaatgtataaccagtataacagttcataccctgga
tcggaccgtcgtccacctggtccccagaatcagtttcctttcccctttggaagagatcgg
atgcaagcaggcacgggcccaaactcccagggttccatgcctcctcaaatgatggccagt
ccaatgcagtctggtcctgatggtcctcaaggtggcatgtggcagggcagaggggaaatg
ggctatcccggttaccccaatcgtcagggacctcctactggtcctggacaaggcccaggc
taccatgcaatgaatcgatctgaagacattttgccatctgaaccacgcatgaatcatgag
ggccaatggcctgggccacgacaacccccatatggccctagtggcgcaggtccaccaatg
agcagacccttgcagtcaaattaccagcccccccaagccatgcaaaaccacattccacag
gtgtcaagccccacacccatgcctcggcttatggaaagcaggacttcccccagcaaatca
gcctacatacccagcaatatcaaaatgcagaaggcgggacctccagtgcctgcatctcac
attgtacctccctcagtacagcctccaatgatgagaagagacctgtccttccctccgggt
tccatagaggcaacatcaccaattctcaaaccacgtaggcgtcttaccatgaaagaaatt
ggtaccccggaagcatggagagtcatgatgtcccttaaatcaggactgttggcagagagt
acatgggctttagacaccatcaacatcttgttatatgatgacaacagtatttcaaatttc
aaccttgtacagctccctggtttcctggaactaatcgttgagtatttccgccgttgcctc
attgagatctttgggattctgagggaatatgaaattggggatccaggacaaagatctctt
ttagatcccagcgtgctcaaaacagatgacaacattgtggatgatgaggtattggttgag
ggcatggaggaagatggagaaacagatgaggaagatgaaggagaggaaatgcaaaggtca
aaacatcaggaacaacacatggcacaagggcctctccagataaagcaggaagaaatgcct
aggacacttgaagactctgtaaagaaagaagattgccaaggaagtgaaggagagtcctct
gcagaacccaagacttcagagccaccaagtctcgagctggatgttactcaagagaagccc
aaacaggctagcaagtttgataagcttcccttgaagattgtgcgaaaaaaggatccattt
gtggtggactgctcaaataagcttggtcggttgcaggaattcgacagcggcctcctgcac
tggagtatcggtggaggtgatacaacagaacacattcagacccactttgaaagcaagatg
gacctgttgcatcttcggaagcgtcttcctgctccggtccctgacaggaagagaggagct
cagaaggacaacctggcaccctctctgccctcatccagtgaagagcatgggaaagaagtg
gatcggcagccctctccacagtcatccactgagaaggtgaccaatggaatttcagacttg
agggacgacagacctgctgactgcctagaaactgcctctgaggggacatcacacatagag
aaagatgaagagaaacaagtaacagaaacgacaacttcagaaaacatcaggtcagcacct
ccaagcccgtcattacagggtcagtgccccatcgccgttttagaagatgagccacacagc
aaggatgaagctcctctcgtcacgctctcagactggcaagactcccttgcccgtcgctgc
atctgtgtctccaacattgtccgcagcctctcgttcatcccgggcaatgactcggagatg
tcaaagcatccagggctgttgctactgcttggccgcctgttgcttctccaccatcgtcat
ccagagcgcaagcaggcacctttaacctacgagaaagaagaggaggtggatgagagtctt
ggtagcaagaaagacgagtggtggtgggactgtttggaggtactgcgagaaaattgcttg
gtcactcttgccaacatctcaggccagcttgacttctctgtctacactgagagcatctgc
ctgcctctgctggatggcttgctccattgggccgtttgtccttcagcagaagcccaagac
cccttccctagtcttgggcttaatggcgccttgtccccccagagactagtcctggagacc
ctctgtaagctcagcattcaggacaacaatgtggacctcattctggcgacgccacctttt
agtagattagagaagctgtttggtaaccttgtgcatctagttggagagcgaaaggtgcct
gtttgtcgggagatggcggttgtgctgctggccaatctcgcacagggtgacagcatggca
gcacgtgccattgcggtacagaaggccagtgtagggaatctattgggcttcttggaggac
agcttagcggctacgcagttccaacagagccaaggttccctactgcacatgcaggggtca
cactttgagccaacgagtgtggacatgatgcggcgggctgctcgggctctgctggctctc
gctaaggtggaggagaaccactctgagtttacgctgtatgaatcgcggctactggacctt
tctgtctccccgctcatgaactcattggtgtcccatgtcatctgtgatgtactctttttg
ataggccagtcatga
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integrated database retrieval system
