Carassius gibelio (silver crucian carp): 127975403
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Entry
127975403 CDS
T08819
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127975403
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127975403
09142 Cell motility
04820 Cytoskeleton in muscle cells
127975403
04810 Regulation of actin cytoskeleton
127975403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127975403
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin alpha subunits
127975403
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
VWA_2
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
127975403
NCBI-ProteinID:
XP_052435407
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Position
B16:14578400..14612568
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AA seq
1171 aa
AA seq
DB search
MEIQKFLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDETNSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKEIIAPTAQRCTTYMDIVIVLDGSNSIYPW
FEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDSLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVTVGDWKRLYVAGAPRFKHKGKVILFDLTPEADVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLVAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLQSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEFYIIPQYKQRIPG
SSLSAGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRAGRDSACLNATVCFLALSRSPGSYGTNFDMQMGAMLDDRKILARALFDYNSQR
QTLMGVTVRVGQTMCKTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCVTDLVLQAHMDISGTREQPYVIRSPRRRLAVEVQLQNQLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTAISSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLNASSDSVEREGTRSDNIVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFYTHFRVQNLGCYAVSNLELIVNLPAVASGDRVFATVVDAFSYNSSGVNCTILGD
LSKLKSSQRDVRPLHPEDMKKAELLNCSSSWCVEVVCHIQQLLKGQTALIRITRRIHDNF
FRQAKFKAVTIVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKDEDENDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagattcagaagttcctgctgctgttgaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtgggcctgaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcaatcctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagacaaattccaattgttcaaaagtcaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatcttaaaaactctcatttggggatgacgctaacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcctctgttaccaatgacatggagcccaaggagatcattgcacccactgcgcagaga
tgcaccacatacatggatatagtgattgttttagatggttctaatagtatctacccttgg
ttcgaagtgcagaactttcttagcaacattctcagcaagttccacataagccctgaacaa
atgcaggtaggtgtcctgcagtacggcgagatctcagtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaaaaacatcagtcgtcaagagggacgg
gagacccgcacagcatacgccatccaaatggcctgcactgaggcctttagtccagacaga
ggagcgagggaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggtgaagaccttcctgattccttggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgccgtattaggtcactacatccgcagacagcaagatccagagaccttcatcaatgaa
attaagtacattgccagtgaccccgatgagaaatacttcttcaatgtgacggatgaggct
gctctaaatgacattgtagatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacacatt
ttggatgatggcatcttgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaagagagcaaagaagggcagctcaagccctcaagagaggccttcgagaaagagttccca
ctggagctgaagaatcacgctgcctacttaggttacacagtgtcatcggtgactgtaggt
gactggaagaggttgtatgttgctggtgcccctagattcaaacacaaaggaaaggtcatc
ctgtttgacctcacccctgaagcagatgtcataatcacacaagccctaaacggagaacag
attggctcttattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gacatcctgctcgtagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgtctggatggggatggttttgctcctaatggtacactacagtctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtggcccctgaccttaaccat
gacggatacgctgacctgcttgtgggagctccgctggaggatgaccaccagggagctctt
tacatctaccacggagatgaattctacatcatacctcagtataaacaacgtatcccaggc
tcctctctctctgcagggctgcagtattttggccgtagcctgagtgctctgctggatctg
gatggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctactgaag
tcacgcagtatagtgcagatcaacgtcagcctgtccttccagccacactccataaacgtg
atacagaagaactgccaccgggctggacgagactccgcgtgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcactaattttgatatgcagatgggg
gccatgctggatgacagaaagatcttggctcgtgctctgttcgactacaactcccagcgg
cagaccctaatgggcgtcactgttcgtgtagggcagaccatgtgcaaaacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagtttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccgacaacattcaagaagtct
atcccattcttcaaagactgtggggaggatgatgtgtgtgtaacggatctggttttacaa
gcccatatggacatttctggaacaagggagcaaccgtatgttatacgcagcccacggcga
cgacttgcagtagaagtgcagctacaaaaccagctagaaaacgcctataacactagcctc
actcttcattactctaaaaacctgcacttcagcagtctgagtatacgggaagatgcccag
tttaagattgaatgtacggctataagctcaaacagtcactcatgtaatgtcagttaccca
gtgttccgctctcagtccaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagcaaggtccagatgaagcttaatgcttcaagtgacagtgtggagagggaaggc
acacgttcggacaacattgtccagttacagagtattgtacagtatgaaccagatctcttc
atcacaagtgactccaacctaaaccgctatgaggtccacccaaccagaaccgtgtctgag
gggacaggacccgagttctacacgcatttcagggtgcagaatctaggctgttatgctgtc
agtaatctggagctgattgtcaatttgcccgctgtggcttcaggagacagagtttttgcg
actgtggttgatgctttctcttataattcttcaggtgtgaactgcactatactgggtgat
ctatccaagttaaagtccagccagagagatgtgcgtccacttcacccagaagacatgaag
aaagctgaactactgaactgctcttcctcgtggtgtgtggaggttgtgtgtcacatccaa
cagctactgaaaggacagacagccttgatccgcatcaccaggaggatacatgacaacttc
ttcagacaggccaagtttaaagcggtgacaatagtgggctcttaccagctgtctgctcgg
gagtccaatctgattacaatgggaaatgctgccctcttgagggagacggttttggaagtg
ctgaaggggcgttccattccaatctctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttggtattcatcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgagaatgatgacaactga
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integrated database retrieval system