Carassius gibelio (silver crucian carp): 127975414
Help
Entry
127975414 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127975414
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127975414
04082 Neuroactive ligand signaling
127975414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127975414
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127975414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127975414
NCBI-ProteinID:
XP_052435418
LinkDB
All DBs
Position
B16:14969668..15047261
Genome browser
AA seq
1952 aa
AA seq
DB search
MVTVPTLSLLLALVEWVGQTSSSPHLLLRPRERERDPVASMHFNIAVIHAGSTVQQGEAG
AAAAAGRVPYPGFGRVHSSFGESVVTQWGSANVIWLQVNDSSPRTLLSQLCDLLAARPLQ
GLVYEDERPLPLVSGPLAPMLEFVSAQTGLPIVAVGGGAGLGRVPQETGSIFLQFSSSTA
LQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVMLNLTDDP
GGARTRRLLKENEAQVRLLYCSQEEAEQVFHAAWAAGQASASHIWFVVGPALSELGLTGL
PSRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGPHFVTNCQTDGNRTQRI
RGRIKYFSNITLGGRDYSFNNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRYPAWS
RYGPFLQPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASTIQEGVAP
MKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGS
LTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAV
TVFIFEFFSPVGYNRSLQSGKKARGSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMV
LVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTE
KNIRSNYPDMHQYMIKYNQKSVEDAISHLKSGKLDALIYDAAVLNYMARKDEGCKVMTIG
SGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSK
LDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMSKMGQSGKLDFLLAFSRGMYSC
CSFEDETAKGGVKVTVPGHHHTAMVPTSSSHVVTSAVSTPAIAMVQQQQQPQQPQPPQSY
KTPLPGSPPTIVHSGAALGPSNTQLVGAPLPCTTFLPRPDRRLAVVDRWRLPKTASATTA
IGVRGAIGETGPLPQKVAPTWAGGGGAGSGLDGYKRYYGPIDPEGLGPCVDQQTGSQTPK
TVPRAHQQPPPTSVVFYQEKGMDHGMGKKVGAGTGGGGQGRGVKSLGTPRLPPKSQTPAS
LTPNPPLQHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGREASRRPRPSPPL
PIPVTLSPSYTPPSPSPSLPYTSTSSSSSTTSSSTTSSATSSRSTSPSSTSTASSRSTRD
REAEEEDEEDLDELTEESSLLQGHNRTRDRERSILSPRSLTHGLPPPIPPRKPWGTFGDR
EHKKDRERERGGSQLGQLQEWWAGWAERERDRERSGGDQGATERKRERKRRKEREKEKKK
KKKKNKKRKKREERERERERERKRRKVKKKKKKAMKTKKKKLSSGKRSEPEEGDVEAERD
GEGDGDREGEYSSFSTQYRSAFADKGGLSAWEGERERGRRDGGEDDRDEREDESGGGRGR
ERRPKSSHSRHQPSSKRYANLNKLPSSVKFWVSGGETGGTEASGPSPPSSLHTLLSLSKR
RRSSGVEREEEGRVGERRPLLLRYERGRVNTREGLSFHEWDSEDEEEEGKEEERARERER
IEERARRAGRGAVSESERDRIRAEESFSDEGSSGEFGHFERYWEGTGAGGASGIGGGGWF
FGTYPAREKGGSVNSRDDSILGRAEGWGLAGDFWGSGPGIGWGSGGGSGGLGSQWPPPPT
SLPPPRRYWSVDKLQMKGEKRSRSGSKSKGQRSRDRMQDAASCTCTQYRHGRPHIHHKHS
STQSHSQEDLLPHCHSFSGSSRPKPPPKPDKSKSGSQSNLSSQQAQLSEHIPQPSPSPPQ
PLLPTLPVPSAPNSLPMPIPPPPSSASMSPPPVLSPGGASCSSQAASAKLQYQRLRSVPQ
PRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagtacccacactctctctgctattggccctggtagaatgggtgggtcagact
agctcctcccctcatctcttgctccggcccagagagcgtgaacgggacccggtggcatca
atgcacttcaacatcgcagtgatccacgcaggctcaacggttcaacaaggggaagcaggg
gctgcagcagctgcgggtagggtgccatacccggggttcggacgtgtgcacagcagcttc
ggtgagagcgtcgtcacccagtggggatccgcaaatgtaatctggctccaggtgaatgac
agcagccccaggacgctgctctctcagctgtgtgacttgctggcagccagaccccttcag
ggactcgtgtatgaagatgagagacccctcccgctggtctctgggcccctggcccccatg
ctggagttcgtttcggcccagaccggcctccccattgttgctgtgggagggggagctggt
ctgggcagggtaccacaggagaccggctcaatcttcctgcagttcagctcttccactgca
ctccaattggaggtgatctttgaggtgctggaggagtatgattggacggccttctcggtg
gtgtccacacgtcaccatggctaccaggacttcctgtcagtagtggaaggtttgaccgat
gggtcattcatcggctgggagaagaagagcgtagtgatgttgaatttaaccgatgatccg
ggaggagcgcgcacacggcggctgctgaaagagaatgaagcacaggtgcggttgttgtac
tgctctcaggaggaagcagaacaggtgttccatgctgcttgggcagctggtcaggccagc
gcctctcacatatggtttgtggtgggtccagctttgtccgagctgggcctgaccggacta
cccagtcggctgtttgcggtcagaccccagggctggagggacgagccccgcagacgtatc
gcccgtggggtgtccattcttacccatggagctgtcgcgttgcgtaaggactacggagcc
acaggagggccgcactttgttactaactgtcagacggatggcaacagaacacagaggatc
cgcggtagaataaagtatttcagtaacatcacgctcggtgggcgggactattctttcaat
aacgagggctacctggccaatccctttctggatgtcatctcctacacgcctgggagtggc
tgggaagacgtaggatggtgggagaatggggtgttacgtctgaggtaccctgcttggtct
cgatatggtccattcctgcagccgcccgatgatgctcagcacctgagggttgtgaccctg
gaggagcggcccttcgttatcgtggagcttgcagaccctgcctctggaacctgcattaga
gactctgtgccatgcagacggcctctcaatgccagtacaattcaggaaggggtggcaccc
atgaaacagtgctgcaagggattctgcatcgacatccttaagcgactggccaaaattgtc
ggcttcacctatgacctctacttggtgaccaatgggaaacatggcaaaaagattgatgga
gtttggaacgggatggtgggagaggttgtgtacaagcgggcagacatggcgatcggctct
ctcactatcaacgaggagaggtcagaggttgtggacttctctgtgcccttcgtggaaacg
ggcatcagcgtcatggtctctcgcagtaacggaaccgtctctccctctgctttccttgag
ccgtacagccctgctgtgtgggtgatgatgtttgtaatgtgcctgactgtggtggcagtg
acggttttcatctttgagtttttcagtccagtggggtacaaccgtagccttcagagtggc
aagaaggccagaggttctaagttcacaatagggaagtcaatctggcttctttgggctctg
gtctttaataactccgttccagtggagaaccccaaaggaaccactagcaagatcatggtt
cttgtctgggctttctttgctgtcatcttcctggccagctacactgccaacctggctgcc
ttcatgatccaagaggaatacattgacacggtgtctggcctcagtgataaaaagtttcag
caccccacggagcagtacccccctctgaaatttggaacggtccctaacggaagcacagag
aaaaacatccgcagtaactatccagacatgcaccagtatatgatcaaatacaaccagaaa
agtgtggaggatgccatctctcacctcaagtctggtaaactggatgccttaatctatgat
gcggctgtattaaactacatggcccgtaaagatgaaggctgtaaagtaatgaccatcggc
tcagggaaagtattcgccaccactggttatggcatcgccctgatcaagaactcccgctgg
aaacggccattggacctggccttactgcagctggtgggcgacgatgagattgagatgcta
gagcgtctctggctctcagggatctgtcataatgataaaattgaggtgatgagctccaaa
ctagacatagacaatatggctggtgtcttctacatgctattggtggccatgggcctaagt
ctgctggtcttcgcctgggaacacctggtttactggaggctacggcactgcatgagcaaa
atgggccagtctggcaaactggacttcctactcgccttcagcaggggaatgtatagctgc
tgcagttttgaagatgaaactgcaaaaggtggggttaaagtcacagttcctggccaccat
catactgccatggttcctacttcttcctcacatgtggtcacttcagctgtatccactcca
gccattgccatggtgcagcaacagcagcaaccacaacagcctcaacctcctcagtcttac
aaaacaccacttcctggctcccctcccacaattgttcattctggagcagctttgggtccc
tcaaatactcaacttgtaggagcaccactaccatgcactactttcttaccacggccagat
cgcaggttagcagttgtggaccgctggagacttcccaaaactgctagtgccacgaccgcc
attggtgttagaggagcaattggagaaacaggacccctgcctcaaaaggtggcacctacc
tgggcaggtggtggaggtgcaggtagtggtctagatggatataagcgctactatggacct
attgatccagagggacttgggccatgtgtggaccaacagacagggtctcaaactcccaaa
acagtccccagagcccaccaacaacccccaccaactagtgtggttttctaccaggagaag
ggcatggaccatggcatggggaagaaggtgggagcgggtactggtggagggggtcagggt
agaggggttaaatctctggggactcccaggcttcctcctaaaagccagaccccagcctcg
ctgacacctaaccccccgctgcagcacccctctccccctctcccttcatccttctggaga
aaacggcgaccaaaaaaacccaaagaacctggtggcccattgtacgagaacatcctgcca
ctgggccggagaggtggaggaagggaagcaagtcgaagaccgagaccctctcctcctctc
cccatcccggtcacactttccccaagctacactcctccatccccctctccctcactcccc
tacacctccacatcatcctcctcatctaccaccagctcctcaaccacatcttcagccaca
tcctcacgctccacctctccttcatctacttccacagcttcatctcgtagcacccgagac
agagaggctgaggaagaggatgaggaggatttggatgagctgaccgaagagtctagtctt
ctacagggccacaacagaaccagggaccgagagcggtccatactttcccctagatctctc
actcatggacttccccctcctatacccccacgcaaaccatggggcacatttggagatagg
gagcataaaaaggacagagagagagaaaggggtggtagtcaactaggacagctccaggaa
tggtgggcaggatgggcggagagagagagggacagggaaagaagtggcggagaccaggga
gctacagaaaggaaaagagagaggaaacgaaggaaagagagggaaaaggagaaaaagaaa
aagaagaagaaaaacaaaaaacgaaaaaagagggaggagcgtgaaagagaaagagaaaga
gaaagaaagcgtcgtaaggtgaaaaagaagaaaaagaaagcaatgaaaacaaaaaagaag
aagttgtcatccggcaagcggtcagagccagaggagggtgacgttgaggcagagagagat
ggagagggggatggggatagagagggagagtactcgtcattttccactcaatatcggagt
gcatttgcagacaaaggcggcctttcagcttgggagggagagagagaaagagggaggaga
gatggaggtgaggatgacagggacgaacgagaggatgagagtgggggaggtagaggccga
gagagaagacccaaaagctcccattcacgacaccaaccgtccagtaaacgctatgccaac
ctcaacaaactcccctcttcagttaaattctgggtcagtggaggcgaaacaggtggcacg
gaggcctccggaccctcccctccctcctctttacatacactcctctccttgtccaagaga
cggaggagtagtggggtagagagagaggaagaagggagagtaggagaacgcaggccactg
cttctccgctatgaaagggggcgagttaacacaagagaaggcttgtccttccatgagtgg
gactctgaggatgaggaggaagaaggaaaagaagaggagagagcgagagaaagagagaga
atagaagagagagcgcggcgggcagggagaggggcagtgtcagagtctgaacgggataga
atcagagcagaagaaagcttttctgatgaggggtcctcaggagagtttggccattttgag
agatactgggaaggaactggagcaggtggagctagtggaattgggggaggggggtggttt
tttggaacgtaccctgctcgagagaaaggtggaagtgtcaacagcagagatgactctatt
ttgggtcgggcagaaggatggggattggcaggtgatttttggggttcaggtccagggatt
ggatggggatctggaggaggcagtggagggctaggttcacagtggccaccccctcccact
tccctgccaccaccacgacgctactggtcagtcgacaaactgcagatgaagggtgagaag
cgaagccgcagtgggtcaaagagcaaaggtcagaggtctcgggataggatgcaagatgct
gcatcatgtacatgtacacagtataggcacggtaggccccacatacatcacaaacacagc
agcactcagtctcacagccaggaagatctgcttccccactgccacagcttcagtggaagc
tctcgacctaaaccaccccctaaacctgacaaatccaaatctggaagccagtccaacctt
agctcccagcaagcccagctctccgaacacataccccagccatcaccctccccacctcag
ccactcctgcccacattacctgtaccttctgctcccaactccctacccatgcccattcct
ccacctccatcctctgcatccatgtcccctccacctgtgctctcccctgggggtgcttcc
tgctcctcacaggcagccagcgctaagcttcagtaccagagacttcggtctgtgccccag
ccaaggcgattctactcaccacacctgccactcaaagccaagagcttgtgctcacgtcgt
ggttctgcccatttctccagcctagaaagtgaagtatga
DBGET
integrated database retrieval system