Carassius gibelio (silver crucian carp): 127975445
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Entry
127975445 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127975445
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127975445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
TipE
Motif
Other DBs
NCBI-GeneID:
127975445
NCBI-ProteinID:
XP_052435504
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Position
B16:complement(9328654..9332787)
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AA seq
430 aa
AA seq
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MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHASPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GRSKEDEDANIFGSDNEGDAEKNEDDEEIDLESIDIDKIDDNDGDQSNEEDEEKRGELER
LHAHEAFEKSKPNAISGSKEPSDGNNNTTSVLSPGRQGGFPVPVSNKPKIWSLAETATSP
DSSQKPTSPSVPATHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVSHQHN
HPVQQQHSSGGAVNSDRAPEDLSPKHIDRGNVLRNESPTQPLKSSFRPLHDGPRNQQEST
QRVLTALSSA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggttacccgcagtatttaagtgcctcccaggcggtgtacgga
ggcgatcggccgggagtgctgactccgtcgtcccgcggagggagcgcagagatcggggga
agcgcgtcggcggccgccgctgccgtgtcctcggtgctgggcatgtacccctacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctcccagatgggc
tctcagtatgatttaaaagacagtcccggagtgcaccccgccagcttcgctgcccacgcg
agcccggccttctacccctacggtcagttccagtacggagacccgtccaggcccaagaac
gccacgcgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaagaacccc
taccccaccaaaggagagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccagaagaagactgaagaaggagaacaaggtgacttgg
ggcagaagtaaagaggacgaagacgcaaatatttttgggagcgacaacgagggggacgcc
gagaagaacgaagacgacgaggaaatagatctggagagcatagatatcgacaagatcgac
gacaacgacggagatcagagcaacgaggaggacgaggaaaagcgcggggagctcgagaga
cttcacgctcacgaggcctttgagaaatccaaacccaacgccatttccggcagcaaagag
ccgtcggatggaaacaataacaccaccagcgttctgtcgccaggtcgccagggaggtttt
cctgttcccgttagcaataagcccaaaatatggtcgttagcagaaaccgcgaccagtccc
gatagctcgcagaaacctacgtcaccctcggttcccgccactcacccggccttcctgccg
agccacggactgtacacgtgccagatcgggaagttccacaactggaccaatggcgcgttt
ctgggccagaactccctgctgaacgtgcgatcgttcctgggcgtcagtcatcagcacaat
cacccggttcagcagcagcactcgtccgggggagccgtgaacagtgacagggcgccagag
gacctgagtccaaaacacatagatcggggaaatgtgctcagaaatgaatcaccaacgcaa
cctttaaagtcatcatttcgccctcttcacgacggccccagaaaccagcaggaatcgaca
cagagggtcctcacagctctctcttccgcttga
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