Carassius gibelio (silver crucian carp): 127975520
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Entry
127975520 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127975520
04121 Ubiquitin system [BR:
cgib04121
]
127975520
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127975520
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127975520
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127975520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_5
Zn_ribbon_19
zf-ANAPC11
zf-C3HC4_3
zf-Nse
zf-RING_16
zf-RING_6
C1_2
HypA
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
127975520
NCBI-ProteinID:
XP_052435623
LinkDB
All DBs
Position
B16:14618570..14631942
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AA seq
309 aa
AA seq
DB search
MAEAAAVTPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNSLDDTAS
QFAELWQLLFVERPFSLDLDSPDSERVLGGGTGSGSLGTGPFGGSVPGGLGGSLGGPLVG
GEHWGPGRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHIDCNMECPV
CKEDYTVGEPVRLLPCNHIFHSDCIVPWLELHDTCPVCRKSLNGEDSGTRSSEPSSLNTD
PRTPERWSF
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtcactccgcatcgcttcttctgtcactgttgtaagggtgaa
gtgagtcccaaactgccggagtatatctgtcccagatgtgactcgggtttcatcgaggag
gttacagaagattccagtcttctggacagtagttcaaatagccttgatgacacagcttca
cagtttgctgagctatggcagctgttgttcgtggagaggccgttcagtctggatctagac
agtcctgactctgagcgggtcctgggagggggaactgggtctgggagtctcggaacaggg
ccgttcggcggttctgtcccaggtgggcttggtgggtccctgggcggccctctagttgga
ggagagcactggggtcctggtcgtcctccacgcctgcacacgcagaggagataccggtcc
agaggaagcagtcgaccggatcgctcgcccgctgttgaaggaatagtacagcagtttctc
gcaggtctttttgccaattcaggagtaccaggctctcctccactgtcatggacgggcatg
ctgcactcaaaccctggggactatgcctggggacaggggggtctggatgcagtcatcaca
cagttattgggtcagtttgagaacacgggtcctcctcctgctgagaaagagaaaatttcc
tccctccccactgttatcatcactcaggaacacattgactgcaatatggagtgccctgta
tgtaaggaagactacacggtgggtgagccggtcaggctgctgccctgtaaccacatcttc
cacagtgactgcatcgtgccctggcttgaactgcacgacacatgtcctgtgtgcaggaag
agcctcaatggggaagacagtggcactcggtcctcggagccttcctccctaaacactgat
cctcgcacaccggagagatggtccttctga
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