Carassius gibelio (silver crucian carp): 127975552
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Entry
127975552 CDS
T08819
Name
(RefSeq) pseudouridylate synthase PUS7L
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127975552
Enzymes [BR:
cgib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
127975552
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127975552
Prokaryotic type
127975552
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
127975552
NCBI-ProteinID:
XP_052435667
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Position
A4:27649458..27653244
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AA seq
650 aa
AA seq
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MDRPSLSCFISDHEGFHGTIKKSPQDFVVIEIDINGQLVNSSNVQEELRKSPSRSSQASK
RDDKLKQSKPDDTDILNQDCFDLNIILGPAVNKELEHFTNKVRVRAGEQEKVELSLGTYP
DKHLRAVVHRAVRYNFPFLQTVTNQSEIRVREDPDFKELASLASEGEAEEFFRFIDAKVP
GSAFTFLPDDSKEHRTSVHHFVSRRFGKLVETKSFTDQQRTSITVRLRERSKHPKKRAAD
SQEELILYTAFTLRKENLETLEAISYMAAVLGVLPSDFTYAGIKDKRAITYQAMVVKKIS
PERLLDKVSEFERRGMQISRVRPVSEPLKLGRLQGNHFDLVIRDLKHHDEHGLTGLQQLV
KEAVENVKNRGFVNYYGPQRFGSGSCVQADQVGLELLKEKMEASVKLFFTPEEGEDLQNK
AKRHFLLTGNAKESLALMPAYKARERLMLRALHRYGSGQEGCIRGWLSLPHSMRVFYLHS
YCSRVWNEAANYRLQKLGFKPVQGDLVWAGSEKGLKDTTEELNTPQVHVVTSEEEKDEVF
SLDQVILPMPGNSVKYPENLLGQWYQDRLAQDGLGQCRFRVTPLKLNVPGCYRPLLAKPQ
NISYSLRSAEEQQGQSDETGTPSLSLTFDLDASCYATVCLGEMMKSNLSQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggataggcccagtctctcctgctttatatcagaccatgaaggtttccatgggaccata
aaaaagtcaccccaagactttgtggttattgagatagacatcaatggacagcttgttaac
agttctaatgttcaagaagaacttaggaaaagtccttctcgatcaagtcaggctagcaaa
agggatgataaattaaagcagtctaaaccagatgacactgacattttaaatcaggattgc
tttgatctgaatataatcttgggtccagctgtgaacaaggagttggaacatttcactaac
aaagtgagagtaagagctggagagcaagaaaaggttgaactgtcattgggtacttatcct
gataaacacctgagagctgttgtccatagagcagtacgatacaacttccccttcctccag
acggtgaccaaccaatcagaaattcgggtcagagaggatccagacttcaaggagcttgca
agcttagcttctgagggagaagctgaggagttcttcaggttcatcgatgccaaagtacct
ggttctgcgttcactttcctgccagatgacagcaaggagcacagaacctcagttcaccat
tttgttagcaggcggtttggaaagcttgtggaaaccaagagcttcacagaccagcagagg
acttctatcacagtgagactaagagagagaagcaaacaccccaaaaagagagcagcggat
tctcaagaggagttgatattatacaccgctttcacactgagaaaggagaacttggagact
ttggaggccatcagctatatggctgctgtactcggagtgcttccgtctgattttacctac
gcagggatcaaagacaagcgagccatcacctaccaggccatggtggtgaaaaagatctct
ccagagcggttgctggacaaagtctccgagtttgagaggaggggaatgcagatctctcgc
gtccgtcctgtgtctgaaccccttaaactcggcagactacagggcaatcattttgatctt
gtcatcagagacctgaagcatcatgatgaacatggacttacaggactgcagcagcttgta
aaagaggcagtggaaaatgtgaagaacagaggcttcgtaaattattatggtccccaacgg
tttggaagtggatcatgtgtccaagcagaccaagtaggacttgaactcttgaaggagaaa
atggaggcttctgttaagctgttcttcactccagaggagggtgaagatctccagaacaag
gcaaagcgtcattttcttctcactgggaatgccaaggagagtttggctctcatgccagct
tacaaagccagagagcggcttatgctccgtgcgcttcacaggtacggcagcggacaggag
ggttgcatacgtggctggctcagtttaccccacagcatgagggtcttctacctccactct
tactgtagcagagtgtggaacgaagccgccaactaccggctccagaaactgggctttaag
cctgtccagggagatctggtttgggcgggatctgaaaagggactcaaagacaccacagag
gaactgaacactccacaggtccatgttgtaacctctgaggaggagaaggatgaagttttt
tcactagaccaggtaattcttccgatgccaggaaatagtgtcaaataccctgaaaacttg
ctgggccagtggtatcaagaccgactggctcaggatggcttggggcaatgccgttttaga
gtgactccccttaaactcaatgtcccgggatgttatcgccccctactcgcaaagccacag
aatattagctacagcctgcggagcgcagaggagcagcagggtcagtcagacgagactggc
acacccagtctatcactaacctttgatctggatgcgtcctgctacgctactgtgtgtctc
ggagagatgatgaagagcaatctttcacagtga
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