Carassius gibelio (silver crucian carp): 127975840
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Entry
127975840 CDS
T08819
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127975840
03041 Spliceosome [BR:
cgib03041
]
127975840
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127975840
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127975840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
127975840
NCBI-ProteinID:
XP_052435801
LinkDB
All DBs
Position
B17:complement(2659205..2703301)
Genome browser
AA seq
1282 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVVDSIVRQSRHQFGQEKDVFAPRFSKNIINTFQNLYRCPADDKSKIVRVLNLWQKN
NVFKSDIIQPLLDMAAGHPPPSVTPVSASSAVPVNSTTPGTPATPATPANIVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFGNESEHSEDSKKDATSSQLPVVPESINNSIF
HQLAEHLQQQNLEQFQKQLMEHQQHQQKSMTMESQDALFGSENSAPPGQSSAPPQLPEQE
AKMDDSIDNQQQDMDIDEGQDTVDEELFEAEEKKTSSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSRVLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLGTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWE
SQRNTETTKETPSQAVTAETSTASSTPSEAFTQPVTMMPMQIPVAQTVPAVGLMPPSFPV
TMTMPPPGFGPPPPFLRAGFNASQPPPGFMATPGVGPSAVGTSLASAQTSLVQPSLPTTQ
ENSKDSPFGAMIPPTSTIPGSFISSAMPGAGVFNPVGAQHQQSSTDKMPQSAETMETASE
MTLQGMQNAVRSRMGLLGMHPSASLTHPLSGQRMAGLLPLELRPNLLQGHGGRFPLLMQP
GLAHQTNNILDASLQAQARVRVPFSQMEQFNRAESTFSRAPNPSSAGAESLAKTDNETPP
RSDGGAQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPPRPPLLERPPRTVMQAEGRE
GRRENMSGGFRAESRWGPPRGDFDERDMRGMSGGPPKGFQEDRSNPNFQNRFEGRSGGSS
GPAWNRGTGPSFNANMHQDYDDRRRPWDRDDRDMDFRGEMNGNRQSRERDRERERERDRN
RDRERGRERNRERERERERENEKDKERWTPVSSQSQPQPLLPKSQPLLPLPTPSIALPHA
QKQVQMTQHQPHQEPQPTERDAEPQPEVTPELQSQPKSLSPPQETASSQEQDGVSCVNGM
ETDSKPQLNILEPASLTAEEPSCSPSPSLPSTPTCFQNEPLTGEKTPELSVSPSVDADTE
QTGPKVNAETEPELEKTDTEET
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcgtttaacggcgagctgtactcactgaatgaatacaagccaccg
atctccaaagcaaagatgacccagattacaaaatcagcaattaaagctataaagttctac
aaacatgtcgtccaaagtgtggagaaattcattcaaaagtgcaagcctgaatacaaagtc
cccggtctgtatgtcgtcgactccattgtacggcagtctcgtcaccagtttgggcaagag
aaagatgttttcgctccacgttttagtaagaacatcattaacacgtttcaaaacctctac
cgctgcccagctgatgacaagagtaagattgtccgagtactaaatctatggcagaaaaac
aatgtcttcaagagtgacatcatccagcctctactggatatggcagcaggacacccgccc
cccagcgttacacccgtctctgccagcagtgctgttcctgtcaacagcactactcctgga
actccagcaactcctgccaccccagccaacatagtgcagagtctcccggactgggcgtct
cagatctccaacacagacacagtggctgcggtcgcccagatcttacagagtccccagggc
cagcagttacagcagctggttcagagcctccagatgcagcagcagaagcctcagccctct
ctgctgcaggcgctggatgcaggtttggtggtgcagcttcaggccctgactgcacagctc
actgcagccgcagcagccaacacgctcaacccgctggaacagagagtctcctcctttaac
aagaagctgttgggtcagtttgattttgggaacgagtcggaacacagcgaggattctaag
aaagatgctacatcatctcagttacctgtggtaccggagtccatcaataactcaatattt
catcagctggccgagcatcttcagcagcaaaacctcgagcagtttcagaagcagctaatg
gagcaccagcagcatcaacagaagtctatgaccatggagagccaggatgccctctttggt
tctgaaaattcagcccctcctggccagagcagcgccccaccacagctcccagaacaagaa
gcaaaaatggatgactctattgataaccagcagcaggacatggatattgatgagggacag
gatactgtagatgaggagctctttgaggctgaggagaagaaaaccagcagcacccgttca
aggacacgctcgagatctcgctccaggtcacctaagagaaggaggtcaaggtctcgttct
gggtcccgaaagcgcaaacacaggaagagatcacggtctcgctcgagggacagaaagagg
aagtcctcacgttcttattccagtgagcgacgagcacgggaaagagaaaaggaacggcag
aaaaaaggacttcctccgatccgctcaagggttctgagtgtttgcagcactactctatgg
gtcggccaagtggacaagaaagccacccaacaagatcttactaacctcttcgaagagttt
ggccagattgaatccatcaatatgattcctcccagaggctgtgcttacatctgtatggtt
catcgtcaggatgcataccgcgcccttcagaaactggggacaggctcttacaaaatcggt
tcaaaggtcatcaaaattgcctgggccctcaataaaggggtgaaacaggagtataagcag
ttctgggatgtggaccttggggtgacttatatcccatgggagaaggtcaaactggatgat
ctggatgactttgcagagggaggcatgattgaccaggagacagtcaacaatgaatgggaa
tcccagagaaatactgagaccaccaaagagaccccgagccaggctgttacagctgaaacc
agtacagcaagcagcacacccagtgaggcctttacccagcctgtcactatgatgcccatg
cagattccagtggcacagacggtccctgctgttggccttatgcctccatccttccctgtc
accatgaccatgcccccaccaggctttggtccccctccaccttttctaagggcagggttt
aatgcctcacagcctcctccaggtttcatggccacaccaggagtaggaccgtctgcagtt
ggaaccagtcttgcttcagctcagacctctctagtgcagccttcgttgccaaccactcaa
gagaacagcaaggattctccgtttggagccatgattcctcccaccagtactattcctggg
agttttatttcgtcagcaatgcccggggctggagtctttaaccctgtgggagcacagcat
cagcagagcagcacagacaaaatgccacagtcggcagaaacgatggagacagcttctgag
atgacactacagggaatgcagaatgcagtgcgcagtagaatgggtctgctgggtatgcac
ccttctgcatctctaacacatcctctctctggccagaggatggcagggctgcttcccctg
gaactgagacccaacctgctccagggacacgggggccgcttccccctgctcatgcagcca
ggccttgcacaccagaccaacaacatcctggatgcttcacttcaagcccaagcccgggtt
cgggttccattctctcaaatggagcagttcaaccgcgctgagagcactttctcaagggca
cctaacccttcgtctgctggagctgaaagtctggccaagactgataatgaaacaccaccc
aggtcagatggaggtgcccaacaagaaggagatcaggactatcgctttccaccaccagag
aagcagagcacggggttgttaaagacgcctcctttggagatgcgtactgaacctgtgcct
cccagaccacctttactagaacgacctccgagaacagtcatgcaagccgaaggtcgagaa
ggtagaagagagaatatgtccggaggcttcagggcagaaagtcgctggggaccacccagg
ggggactttgatgagcgagacatgagggggatgtctggtgggcctccaaagggtttccag
gaggatcgttccaaccctaactttcagaatcgttttgagggccgcagcggaggttcatca
ggacccgcttggaatcgcggaactgggccttcttttaatgccaacatgcaccaggactac
gatgatcgtcgcagaccttgggaccgagatgacagggacatggacttccgaggtgaaatg
aatggcaatcgccaaagccgtgagcgagaccgagagcgcgaaagagagagggacaggaat
cgggaccgtgaacgcggcagagagcgcaatcgtgagagagaacgggagcgagagagggag
aatgagaaggacaaagagcgctggacacccgtttcttcacaatctcagccccaaccgctg
cttcccaagtctcagccgctgctccctctgccgaccccatcgatcgctctgcctcatgca
cagaaacaagtgcaaatgacccaacaccagcctcatcaggaaccacagccaacagaacga
gatgctgaaccccaaccagaggtaacaccagagctgcagtcacagcccaagtcactcagc
ccccctcaagagacggcaagtagtcaagagcaggacggagtgtcatgtgtcaatggaatg
gagactgattcaaaacctcagctaaacattttggaacctgcgtccctgaccgctgaagag
ccctcttgtagcccctctccatcccttccctccacacccacctgcttccagaatgagccc
ttgacaggagagaagaccccagaattgtctgtttccccctctgtggatgcagacactgaa
cagactgggccaaaggtgaacgctgagactgaacctgagctagagaaaacagacactgag
gaaacataa
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