Carassius gibelio (silver crucian carp): 127975891
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Entry
127975891 CDS
T08819
Name
(RefSeq) RNA polymerase II-associated protein 1-like isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127975891
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127975891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
DUF4519
DUF3347
Motif
Other DBs
NCBI-GeneID:
127975891
NCBI-ProteinID:
XP_052435881
LinkDB
All DBs
Position
B17:13760154..13781794
Genome browser
AA seq
1402 aa
AA seq
DB search
MLRRPKPTDSEADLLREQQELLAAGARSSVSGVKRADKRRGDAAAADALEQGNQRDVVTI
EDLPDDLPTLTPAPLKKSRFKQERVHFEDEDPGERLDRHDTHISAVLSRIIERDTSTVPV
SLPSITGAAFPKVLHRSVMESEGQERAPKGRKSIFARQIAAQRSKKEETRNQCSASRHVS
FSLMGNMETERPESDVMDRVGGPVLLTGQGLGIANSAMETMKIHEENQAKLQAMSQSEIL
EEQRKLLAQLGPRLVDFVRSRGAQRTPGSESASGTVQREDFLNEPLPDSTSPQLDHTIKT
QESQGNTMEDDEEDENQLLAQPPITDEELPVKPQKEWLHMDKVEPEKLEWTRDLPAPRKQ
STKKAMQARFDFAGSLIPPTEDVPTHLGLHHHGEEPELAGYSLQELFLLSRSQLNQQRNL
AVSTLANILAKARAGEYISSLKGSVLSSLLDSGVLFLLRFSLDDSVEGVMSAAVHALRAL
LVSSDDEECLDNAFSWLLGMATFPLLPTAQEDEDEDDEGLDETMKETAKEKEERKTDHDV
ARQDVVKGFLKMQGLPRLRYIVEVVRPSPRVVLDILEVLIRIARHSTAAATQILDCPRLM
NTVISEFLPCSWAPATSQAPSSLYGLPVALAMKLLRVLASAGRHACARILNSLGGKEVLS
RFVVVEPSEMLLEAGEALRCSTEALRLFAVAAGYGQACSLYTDLYPVLVKRLQARNRLCA
SSEAVLLQELDPIRALLVLLTRVTQTAGCHEELQRDLVSAQGTECPPAPPVVWSHVTGLQ
PTVISSLKGYVRALDGPAQMSSALILLPSYLLYTEAYYSQLCVQSSFQPVQCLQELESLT
SDVLLPLISHQAMQNITSSFRSSSIICNPGLSAAGGEVISSLPGLGCSRMKTSSTMAGLN
SPLPLPTALLYLLNTITSIHKGLIKKFSPLILSDSVLSYLRSCIGAMPTVSHSSAWILRH
EHHLLYLLLRLAHKLVPVDPEVAKHAVLFHHVSLALVSWLLPGSEYLAHELMSVMTFSHS
LLPEGVSGEPEIAALAELQLKDRTSPAVGALLREALHHLPSIRGCYLTHLAHMESSVLSS
RDRYLGRTPFVSSHLLPELTGPSLPSDWPFLPLISLYERMGLSAGGGHQVECLPAGSVQS
VTNCLQWLLVLESWREQALTPVPPVAKLARLACVFLCSSDLFLERPVQELTWALFRRLTQ
PAQLEALDLGSPPPGLASFHDLYSALLAQYEAVSFGDPLFGCFMLLPLQRRYSVTMRLAV
FGEHVGMLRSLGVPLQQLPIPLEKFTSPMEGSLPLLRLYFRALVTGALKRNWCPVLYVVA
VAHLNAFIFSQDAVTEEVEAARRSLLRKTCYLTDEVLKNHLLLFQLPQQNSELGFITYEQ
LPTIRARRLESIVGTKIKGGER
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcgtcccaagcccacggacagcgaggcggatctgctccgggagcagcaggag
cttctggcggcgggcgctcggtcctctgtctccggggtgaagcgcgctgataaacgccga
ggagacgcggctgcagctgatgcactggagcagggaaaccagagagatgttgtgactata
gaagatcttccagatgaccttcccactttgacccctgcacctctaaagaagtcacgcttc
aaacaggagcgggtgcattttgaagatgaggacccaggagagcgactggacagacatgat
acccacatcagtgctgtcctgtctagaatcattgagagggacacgagtacggtacccgtg
tcgctcccgtctatcacaggcgctgctttccctaaagtcttacatagatctgtaatggaa
agtgaggggcaggaaagagctcctaaaggaagaaaaagtatttttgcacgtcaaattgcg
gcccaaaggtctaagaaggaagagactagaaatcagtgttctgcatctagacatgtgagc
ttctctctgatggggaatatggagactgagcgacctgagtcagatgtgatggaccgtgtt
ggtggccctgtgctacttacaggtcaaggactagggattgcaaatagtgccatggagacg
atgaaaatccatgaggagaatcaggcaaagttgcaggcgatgtcccagagtgagatcctg
gaggaacagaggaagctgctggcacagcttggccctagattagtagacttcgtgagatct
cgaggggcacagagaaccccgggatctgagtcagcatctgggactgtgcaaagagaagac
ttcctgaatgaacctctgcccgacagcacgtctccacagttagaccacacaataaaaact
caggaatctcaggggaataccatggaggatgatgaggaagatgagaatcagcttctagct
caacctccaattacagacgaggagctgccagtcaagcctcaaaaggaatggcttcacatg
gacaaggtggagccagaaaaactggaatggacaagagaccttcctgcacccaggaagcag
agcaccaaaaaggctatgcaagcacgttttgattttgctggctctctcatcccacccacc
gaagacgtgcccacccatttaggcctgcatcaccatggagaggagccagagctggctggc
tactcactgcaagagcttttcctcctctctcgcagtcagctgaaccaacagcgcaatctg
gccgtcagcactctcgctaatatcctggccaaagcccgggctggtgagtacatttcctct
ctaaagggcagcgtcttgtcttctttattggattctggagtcctctttcttctgcggttc
tccctggatgacagtgtggagggtgtgatgtcagcagcagtgcatgccttgcgagctctg
ctggtctcatctgacgatgaagagtgcttggataatgccttctcatggctgctcgggatg
gcaacctttcctttactgcccactgctcaggaggatgaggatgaggatgatgaaggcttg
gatgagaccatgaaagaaactgctaaagagaaagaagaaagaaaaacagatcatgatgtt
gctaggcaggatgttgtcaagggctttctgaagatgcagggtcttcctcggctgcggtac
atcgtggaggtggtgcggccctctccccgggtcgttcttgatattctggaggttctgatc
cgaatcgctcgccactcgactgctgcagcaacacagatcctggactgtccgcggctgatg
aacactgtgatttcggagtttcttccctgctcctgggctcctgccacctcacaggctccg
tcctctttgtatgggctcccggttgccttggcgatgaagctgcttcgtgttttagcaagt
gctgggaggcatgcttgtgctagaatactgaactctctaggagggaaggaggttttgtca
cgtttcgtggttgtggaaccgtcagagatgttgctggaagcaggtgaagctcttcgctgc
agtacggaggcgctgagactgttcgcagtggctgccggctacggacaggcttgcagtctg
tacacagacctgtatcctgtgctggtgaagaggttgcaggctcggaaccggctgtgtgct
tcatctgaggctgtgctgcttcaggagctggacccaatcagagctctgctcgtgctgctg
actcgggtcactcagacggcaggatgccatgaagaactgcagagagacctagtcagtgct
cagggtacagagtgtcctccagctcctccggtcgtgtggagtcatgtgaccggtctccag
cccactgtcatcagctctctcaagggctatgtgagagcactcgatggcccggctcaaatg
tcaagtgctctgattctgcttccatcctacctgctctacaccgaggcgtattattcacag
ctctgtgtacaaagctctttccagccggtacagtgtctgcaagaactcgagtcactaact
tcagatgtgcttctgccactgatatcccatcaggccatgcaaaatataaccagcagcttt
aggtccagctctattatctgtaaccccgggctgagtgcagctggtggggaggtcatctcc
agtctgccaggtctgggctgctcgaggatgaagacctccagcacaatggcagggctcaac
tcccctctgcctctccctactgccctcctgtacctgctgaacaccatcacctccatccac
aaaggcttaataaagaagttcagtcctctcatcctctcggactctgtactgagttatctg
cggtcttgtatcggagccatgcccactgtttctcactcgagtgcctggattttacgccat
gagcaccacctgctgtatctgctgctcagactggctcacaagctggttccagttgaccca
gaggtggccaaacacgcagtcttgttccaccatgtatcgctggctctagtgtcctggctg
ctgcctggcagtgaatatctggcacatgaactcatgtctgtcatgaccttcagtcacagc
ctccttccggagggtgtctctggtgaaccagagattgctgcgttggctgagctgcagctt
aaagacaggacttcacctgctgttggtgctctgctgcgtgaggctctccatcatttgccc
tccatccgcggttgttacctcacccaccttgcacacatggaatcctctgttctttcatcc
cgtgaccggtacctcggccgaacgccttttgtcagctctcatctcctacctgaacttact
ggcccctccctgccttctgattggcccttcttaccgctcattagtctctatgagcgaatg
gggctgtcagctggtggtgggcatcaggttgagtgtcttccagcagggtcagtgcagtca
gtcactaactgccttcaatggctgcttgttctggagagttggagagagcaggctctcacg
ccggtgccaccagtggcaaagttagcccggctagcctgtgtctttctgtgctccagtgac
ctcttcctggagcggcctgtgcaagagcttacttgggcgttgtttcgcaggctaacacag
ccagctcagcttgaggcgctggatctgggctcacctccaccaggcttggcttcctttcat
gacctgtactcagctctgctggcgcagtatgaggctgtgtcattcggtgacccactcttt
ggttgcttcatgcttttgcctctacagcggcgctacagtgtcaccatgaggctggctgtg
ttcggagaacatgtgggaatgttgcgatcgctgggggtcccgctacagcagctgcctatt
ccactggagaagttcacgtcccccatggaaggctcccttcctctgctgcggctgtatttt
cgagcactggtaactggagctctgaagaggaactggtgtcctgtactttatgtggtggct
gtcgcccacctgaatgcctttatcttctcccaggatgcagtgacagaggaggtggaggcg
gcacgtcggagcctgctgagaaagacatgctacctgacagatgaggtgttaaagaaccac
ctgcttctttttcagctgccccagcagaattcagagctgggcttcatcacttatgaacag
ctacccacgatccgtgcccgcaggttggaaagcattgtgggaacaaaaataaagggcgga
gaaaggtga
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