Carassius gibelio (silver crucian carp): 127975938
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Entry
127975938 CDS
T08819
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127975938
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127975938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
127975938
NCBI-ProteinID:
XP_052435951
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All DBs
Position
B17:complement(24953336..25235147)
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AA seq
978 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNVQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRFEGPPPNTSVKAIGSQRRRSPSAVA
TEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNTLER
SFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
TGQPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVERYGDGEVE
ELQDSPSSCSSSEEEEDDVEDIVKNCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRLR
LSPSAAATPSPGSLDPTLGDQPPLLLPASPTNSSVLKIKTEMSEPINFDNDSSIWNYPPN
REISRNESPYSMTKPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSSSN
NNSAPTSVSNATPGSLVPPSSSTTADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQ
RLQAGNMVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTAVNF
VDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGSVSGAGLTQMPAANVFTTAEGLFSTLPF
PVYSNGIHNTQTLERKED
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggagggatgccggctgcgtccagagtcccgggagctaccaacgggaacccg
caaaacgtccaaggtttgacgtcctaccaacaaagcgagccatactgggaaaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctgaggaaggagaagtcacgtgacgccgctcgctcg
cgcagggggaaggaaaacttcgagttctacgagctggcaaagatgcttccgctccccggt
gccatcaccagccagctggacaaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggggacccgccgtggaacctgcgcttcgaaggaccaccg
cccaacacctcagtcaaagctatcgggtcccaacggaggcggagccccagtgctgttgcc
acggagatctttgagcctcaccttggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacggtctccatatacctg
gggctttcacaggtagagctgacgggcagcagtgtgtttgactacgttcatccgggcgat
catgtggagatggccgagcagctgggcatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctagtctcctgtcgccggataacactctagaacgt
tccttcttcatccgaatgaaatccacactcaccaagagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcagtacccaatcaaatcatgggaatggttgtggtggcacacgcacttcctccgcca
accatcaatgaggttcggatcgactgccagatgtttgttacacgggtcaacatggatctc
aacatcgtctactgtgaaaatagaatcagcgactacatggacctgacacctgtcgacatc
gtaggaaagagatgttatcacttcattcatgcagaggacgtggaaggcattcggcaaagc
catttagacctgatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaaa
aatggaggttatatatggatccagtccagtgccactattgcaatcaacgccaagaatgcc
aacgagaaaaacataatctgggtcaactatgtactcagtaatccagagtacaaagacaca
cccatggatatcgcacagctgcctaacctgccagagaaagcatcagagtcctccgaaaca
tctgattctgaatccgactccaaggagaactctgaagacaacgaaaactccaagtcagat
gggaagggcaatcagtcttccgagaacagtgaagatccagagtcagacagtaagaaacag
acgggtcagccaccagagcaagagatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaactgaccacaag
gagggccgcctgggtggtttacacataaaggtggagcgctatggtgacggtgaggtggag
gaactacaggactcgccctcctcttgctcctcctcagaagaagaagaggatgatgtggaa
gatattgtaaaaaactgcaacagtggaggagagctgagcgggccagcaatgagtaaacac
cagaagagaaagaagaggagaaaaaagcagaaatgggatggtagtcggcaacgtctccgt
ctgtctccctcggcggctgctaccccaagccctggcagcctggaccctacccttggagac
cagcctcccctcctgcttccagcctccccaaccaattcctctgtgctgaagatcaagact
gagatgtcagaacctataaactttgacaacgacagcagcatctggaactacccacccaac
cgagagatctcccgcaatgagtctccctacagtatgacaaaaccccatgacaccttccct
tctcccccacctgccggcctccaggtgtccatcccggactctgtcctcactccacctggt
gccgagggtggaggaggcagcagaaagcccaacttcaatggcaacagtagcagcagcaac
aataatagtgcacccacctctgtgtccaatgcaactccgggcagcttggttcctccttcc
agttccacaaccgctgatccactctccccacctctctcggcctcaccacgggacaagcag
cagggtacacccacctcctctggttccctgctctacaccagtgaccttgaagccctgcag
aggttacaagcggggaacatggtacttccattggtgcacagagtcacaggcacgcttgct
gccacgagcactgcttccccgcgagtctacaccactggaactattcgatatgccccggca
gacgtcagcttggccatgcagggcaacctcctgcctaatgcccacactgctgtgaacttt
gtggatgggcctgggtttgggatagaccccaagacacccatggagatgctgtaccatcat
gtgcaccggctcaacatgtccacccccttcggtggttcagtaagcggagctggcctcacg
cagatgccagctgctaatgtctttaccacagcagagggacttttctccacgcttccgttt
cctgtctacagcaatggcatccacaacacacagactctggagcgcaaggaggattga
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