Carassius gibelio (silver crucian carp): 127976033
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Entry
127976033 CDS
T08819
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127976033
03015 mRNA surveillance pathway
127976033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127976033
03041 Spliceosome [BR:
cgib03041
]
127976033
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127976033
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127976033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
127976033
NCBI-ProteinID:
XP_052436089
LinkDB
All DBs
Position
B17:complement(17134491..17145101)
Genome browser
AA seq
972 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVVKPWITQRVTEIL
GFEDDVVIEFVFNQLEEKNPDGKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKREKESKERAQSKSPKRRKSRSPVKRDRKS
SPSRSPRRKPSPAASPPSSPPNHKEEPKQEPDQSESSKPEPLVQEASSTSDLVGDVKPDS
VSEAVKESSPDKTSKSEDRPKPRERDREKDGRRDRPRQRSRSPRSRRRPRSRSRSFSPRR
RTSPRRRISPRRRSPPRRRPPSRHRRSRSPVNRRRSRSRSSSGSSSSRSPHKRVGKRGSA
TPPRKLPRRSDPSSPSRRRGHSPSRPDTSPSAVKLRPGGRNDSRSPSPKPRQSDASDSEE
EKVGKESTADSVQQRRQYRRQNQQSSSDSGSSSSSEDEGPRRQNRGAGARNGEFRRRRSH
SPASPRRRHREASPRKRRSPSPAGRRHRSPSPVRRRRSPSPPPRRRSPSPPHRRFTPPIQ
RRYSPSPPPAQKRRSSGSPPKRRRSPSPLSKRRGSPSPLSKRRASPSPISKRRGSPSPVS
KRRGSPSPVSKRRGSPSPVSKRRGSPSPVSKRRGSPSPVSKRRGSPSPVSKRRGSPSPVS
KRRGSPSSVSKRRGSPSPVSKRRGSPSPLSKRRGSPSPVSKSRASPSPVAKRRGSPSPVA
KRRPSRSPKRSRGSSPGKRRTPPSSASPPSRHRRSPPAARGRDARSSPHSTRVSSSPLPR
YGPSGSSPQRQRRQMSPSHSTRPIRRVSRTPEPRKSQRGSQSPQPVRRQVSRSPSASPPP
APTAHKRPASVSPSRSASCSPPPPAKKNSSVSPSPSPNKNSDAEGGKKKKRKKEKKHKKE
KKHKKHKKQKKEKSGEEKSGGATGGQEAEPDSDQKKESESEVEDSLDDLEKQLREKALRS
MRKAQMSPSSQS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaggataaccgtttcagcaacaaa
cataagaagctgttgaagcaactcaagtttgcagaatgtctggagaagaaggtggatatg
accaaggtcaacctggaagtcgtgaagccctggataacccagcgagtgacggagatcctt
ggctttgaggatgatgttgtcatcgaatttgtcttcaaccagcttgaggaaaagaatcct
gatggtaagatgatgcagattaatttgaccgggtttctgaatgggaaaaatgctcgggag
ttcatgaaggacctctggccgctgttactaagtgcccaggagaacattgctggtatcccg
tctgccttcctggagcagaagaaagaggagatcaaacagagacagattgaacaggagaaa
cttgcctctctgaaaaaaatagatgaagataaaagagagaaggagagcaaagaaagagct
cagtcgaaaagccctaaaaggaggaagtcccgctcacctgtgaagcgtgaccgtaagtct
agtccctctcgatctcctcgccgaaaaccgagcccggcagcctcaccgccttccagtccg
cccaaccataaagaagaaccaaagcaagaaccggaccaatcagagagctccaaaccagag
ccgcttgttcaggaggcttcctctactagtgatcttgtgggtgatgtgaagccggactct
gtgtctgaggctgtgaaagagtcatctccagataaaacatccaaatcggaagacaggccc
aaacccagagagagggacagagagaaggatggacgtagagatcgcccacgtcaacgctct
cgttcacctcgctctcgtagacgacctcgatcccgctcaaggtcattctcaccgcgtcgc
agaactagtcccaggaggcgaatctctccaagacgtaggagccctcctagacggagaccc
ccctctaggcatagacgtagccgttcacctgtcaacaggcggcgctctcgctcccggtcc
tcttctggtagttcctcttctcggtcaccccataagagagtggggaaacgtgggtcagct
accccgcccagaaaacttccacgtcgctctgacccctccagcccttccagaagacgaggt
catagtccttcaagacccgacaccagcccttcagctgtgaagctcaggcctggtggaaga
aatgactctcgctctccgtcccctaaaccaaggcagtctgatgcatcagactccgaggag
gagaaggtggggaaagagtcaacagcagattctgtccagcagcgacgtcagtatcgcaga
cagaatcagcagtcctcttcagactcgggttcatcctcttcttctgaagacgaaggtccg
aggaggcagaataggggggcaggtgccaggaatggagaattcagaaggcggcgtagccat
tcacctgcatcaccacggagaaggcacagagaagcatccccaagaaagagacgttctcca
tcacctgctggccgcagacatcgttcaccttctcctgttcgccgacgcaggtcaccctct
cctcccccaagacgcagatctccatctccacctcatcgccgcttcactccccctatccaa
cgccgatacagtccctcccctccccctgctcaaaagagacgctcatcaggctctccaccc
aagcgcagaaggtctccctcccctttgtccaagcgtagagggtctccttcacctttgtcc
aaaaggagagcgtctccttcccccatttcaaaacgtagaggttctccttccccagtttca
aaacgcagaggatctccttcaccggtgtccaaacgcagaggatctccttcaccagtgtcc
aaacgcagaggatctccttcaccagtgtccaaacgcagaggatctccttcaccagtgtcc
aaacgcagaggatctccttcaccagtgtccaaacgcagaggttctccttccccggtttca
aaacgcagaggttctccctcctcggtttcaaaacgcagaggatctccttccccagtgtcc
aaacgcagaggatctccttcaccattgtccaagcgtagagggtctccctcacctgtgtcc
aaaagcagagcatctccctcacccgtggccaagcgtagagggtcaccctctcctgtggcc
aaacgtcgcccctctcgatccccgaaacggagtcgtggcagtagtccaggaaaaagacgt
actccgccctcttctgcttcacccccatcccgccaccgtagaagtccccctgcagcccga
ggcagagatgctcgttcttctccccacagcactcgagtgtcttccagtcctctgccccga
tatggcccctctggttcatccccacagagacaaagacgtcagatgtctccgtctcatagt
accagacccattcgcagggtttcccgcacaccagaaccacgcaaatctcagagaggttct
cagagcccccagccagtaaggaggcaggtttcacgttcaccatctgcttctcctcctcct
gctccaacagctcacaagcggcctgcttctgtctcaccttctcgctctgctagctgttct
ccacctccacctgccaaaaagaacagcagcgtttccccgagcccgtcacctaacaagaac
tctgatgctgaaggtggtaagaagaagaaaaggaagaaagaaaagaaacacaagaaagag
aagaaacacaagaagcataagaaacagaaaaaggagaagagtggagaagaaaagagtgga
ggggcgacaggaggacaggaagcagagccagattctgatcagaaaaaggaatcagagagt
gaagtagaagacagtttggatgatctggagaagcaactacgtgagaaagctctccgctca
atgaggaaggcccagatgtccccatcatctcagtcctga
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