Carassius gibelio (silver crucian carp): 127976083
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Entry
127976083 CDS
T08819
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127976083
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127976083
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127976083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
CFAP43_N
WD40_like
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
127976083
NCBI-ProteinID:
XP_052436160
LinkDB
All DBs
Position
B17:25936978..25977264
Genome browser
AA seq
1141 aa
AA seq
DB search
MKKFNIRKVLDGLTSSSSSAASLQSGNRENDMIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRAGVECFCQHESGSAVIQLEFLVNEGALVSALADDSIHL
WNLRQKLPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVIMWN
KAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAIHSVA
WHHEGKQFVCSHSDGTLTTWNIRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVLIDLAQIGYPIFENPYPLSIHESPVTCCEYFADCPAEVIPALYSVGSRQK
RQGFSKKEWPISGGNWGQGTLSFSEMIITGHADGSIKFWDASALMLQVLYKLKTAKVFEK
PRSKEEKSSTEIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVVQLLE
VRMQCELNEVESPECGGEQASAVSTPGTQSSPQTSLPQSHPSTSSNNSSDGLRDNVPCLK
VRSSPLKQSAGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGNGNGLAVIDYLQKT
LLLNMSIAELYGSTDPHHRQPRSPRKTRQPSAGLCDGNDASAAPEEKCKSPTGSGSPCNS
DEDSKQKFIDRVKSKSKRISKTVANDFAKISRKINMIADQKDDARDNSFSRSRSSSVTSI
DRESREVISSFYFCDSLSKKSETVAVPSLWVGTSLGSMLAIVLTVPSTPEQRMQQPLGVA
FCGPVVRLKGGILRMAQLDASGTLLPHVYESWYEPNAPEEERERPQRRRPTSPPSSQENP
DCQYAVVCSEKQAKVVAMPSQNCVYEHNITETSFVLRADVVTMTAGVGIACFCANGHIMT
LSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQALYLTSPTEIQRITYIQETCDNLQEML
GELFTPVETPEAPNQGFFKGLFGGGAQSLDREDLFGEVSAGKASRSLAQHIPGPGGMEGM
KGAASGVVGELARARIALDERGQKLGELEERTAAMMASADSFSKHAHDVMLKYKDKKWYQ
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgttggacggcttgacgtcctcttcctcctccgcc
gcgtcccttcagtcgggaaaccgggagaatgacatgattcaggagaccctgcagtcagag
catttccagctctgcaagacagtgcgacatggctttccctatcaaccctcctccatggct
tttgaccctgtgcagaaaattttggctattggcacacaaagtggagccctgagactattc
ggccgagctggagtggagtgtttctgccagcatgagagcggatcggcggtcatccagcta
gagtttcttgtaaatgaaggtgcgctagtaagtgctttggcagatgacagtattcatttg
tggaatctgaggcaaaaacttccagccgtcctccattctcttaaatttaaccgggagagg
atcacgttttgccatttgccgtttcagagtaaatggctgtacgtgggcacggaaagaggg
aacattcacattgtcaatgtggagtccttcaccctctcaggctatgtgatcatgtggaac
aaagccatcgaactttcctcaaagactcatcctggacctgtagttcatatcagcgataac
cctatggacgaagggaaacttttaattggttttgagtgtggcatagttgtgctgtgggac
ttgaaatcgaagaaagctgactatcggtacagctatgatgaggcgatccactccgtggca
tggcatcacgaggggaaacagtttgtgtgcagtcactcagatggcacgcttaccacatgg
aatatacgcgctcctgccaagcctgcccagatcattacgccacatggtaaacagcccaag
gatggaaagaagccggagccttgcaagcccatcttgaaagtggagtacaaaactacgaga
gcaggggacccattcatgatactgtgtggaggtttgtcatatgatacagtgggtagacga
gcctgtctgactgtgatgcacgggaaaagcactgcagtgctggagatggactaccccata
gtggatttccttacgctgtgtgaaaccccatatccaaacgatttccaggagccttatgct
gttgttgtcctgctggagaaggatttggttctcattgatcttgcacaaattgggtatccg
atctttgagaatccatatcctctgtccatccacgagtctccagtgacctgctgtgaatat
tttgcggactgtccagctgaagtcattcctgcactttactccgtgggctccagacagaag
agacaagggttcagtaagaaggaatggcctataagtggaggtaactggggccagggaaca
ctaagtttctcagagatgatcatcactgggcatgctgatggatcgatcaagttttgggat
gcctcagcattaatgctgcaggttttgtataagctgaaaacagcgaaggtgtttgagaag
ccccgcagtaaagaggagaaatccagcactgaaattgtggatgaagatccgtttgccatc
cagattctgtcctggtgtccagagagccgtgtgctctgtgtggctggagtctcggctcat
gtcatagtgtacaggttcagcaaacaggaagtcaccactgaagtggttcagctcctggag
gtgcgtatgcagtgtgagctgaatgaagtggagtctcccgagtgcggaggcgagcaggcg
tcagctgtgtccaccccaggaacccaatctagccctcagacctccctgcctcagtcccac
ccctccaccagcagcaacaactcgtctgacggcctgcgagataacgtgccctgtctcaag
gtcaggagttctcctctcaaacagtctgcggggtaccaggtggagctgctcattcagctg
gtgtgggtcagcggggagccgccacaacagatcaccagcctggccgtcaactctgcatat
ggcctagttgcttttggcaatggtaatggacttgcagtgattgattaccttcagaaaaca
ctgcttctgaacatgagcatagctgagctgtatggatcaacagatcctcaccacagacaa
ccgcgctcgccccgcaaaaccagacagccctcagcaggtctttgtgatggtaatgatgca
tcagccgcaccagaggagaaatgcaaatcaccaacaggctccggttcaccgtgcaattct
gatgaagacagcaaacaaaagttcattgacagggtgaagtccaaaagcaagcggatatcc
aagactgttgccaatgactttgctaagatatcccggaaaattaacatgattgctgatcag
aaagatgacgccagggacaactcattcagccgctcacgcagctccagtgtgaccagcatt
gacagagagtcacgtgaggtcatttcttccttctacttttgtgactctctgtccaagaag
agcgagactgtggcagtgcccagcctgtgggtgggcacctcattgggcagcatgctggcc
atcgtcctcactgtgccctccacaccagagcagaggatgcaacagcccttgggcgtcgct
ttctgtggtccagtcgtgcgtttgaagggaggtattttgcgcatggcccagctggatgcc
agcgggacccttctgccccatgtttacgagtcctggtatgagcccaacgcccctgaggag
gagagagaacggccacagagacgccggcccacctcgcctccttcgtctcaggagaacccg
gactgtcagtacgctgtggtctgctcagagaaacaggcgaaggtggtggcaatgccctcc
caaaactgtgtctatgaacacaacatcacagagacctccttcgtactgagagctgatgtg
gtgacgatgaccgcaggggtcggcatcgcctgcttctgtgccaatggccatatcatgacc
ctcagtttgcccagcctgcggccactgctagatgtgaactaccttcccctgacagacatg
aggatagctagaaccttctgtttctcaaaccaaggccaagctctgtacctcacatcgccc
actgagatccaaagaatcacctatatccaggaaacctgtgataacctgcaggagatgctt
ggagagctgtttactccagtggagacaccagaggctccaaaccaaggcttcttcaagggc
ttatttggaggcggggctcagtccttagaccgagaggatctgttcggagaggtgtctgca
ggtaaagcttcacgcagcctggcgcagcacatcccaggtccaggtggtatggagggcatg
aagggggccgcgtccggtgtggtgggagagttggcacgggcgaggatagctctggatgag
agaggacagaaactaggcgagctggaggagaggacagcagccatgatggccagcgctgac
tccttctctaaacacgcgcatgatgtgatgctgaaatacaaggacaagaaatggtaccag
ctctga
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