Carassius gibelio (silver crucian carp): 127976172
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Entry
127976172 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1-like isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127976172
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127976172
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
127976172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127976172
NCBI-ProteinID:
XP_052436366
LinkDB
All DBs
Position
B17:complement(9990552..10024110)
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AA seq
1738 aa
AA seq
DB search
MAVAESLNGLQLSTKWQEDSNRGAAILRYLGEQVPLIYCLETEPQQGEEERKVEQCLLYP
LECFLFGEEPCVGLQKLQQSNSSSSALQCGRVFKEGETVYSCRDCAIDPTCVLCIECFQK
SVHKSHRYKMHASAGGGFCDCGDLEAWKSGPCCSQHDPGTSVSMEMDECVMDPGLRERAQ
MLFHLLLRYTTDMLVWEETYELSEELKPKVKEDTYFCVLYNDEHHSYDHVIYTLQRAIAC
DQNQAQIYTALIDKEGRKAVKRGTLRSCQQAKDNIRRNSEHIIQIPLRVEILHTAVMAHQ
TFALRLGAWFQKIIGYLVGLREVFCQVALEPGADNNQLCLISRLMLHDAKLYKGARKVVH
ELIFSSLLMDTEFKRQFAMKFTEHYKQLQEDFISDDHQRNISITGLSVQIFTVPTLARQL
IEEGSVIKVIIETVMDMMRAHLDSSNRFQFQGHNPDKFFRVQVTFHDLRYILISKPSVWT
ETLRVKFLEGLRVFLRFLCCMQGMEEVKRQLGQHVEVEPEWEAGLTLQMQLRNILAMFQD
WCSSDERVLLLAFQECHRALMSCTNQPFRSEPTDSYMCKQILHARPYKVSQEPVSIHLPV
SRLLAGLYVLLCQTGAIQYLPDFVDPVQLNFTELAEQPLRCVVLAAQVCADMWRRNGLSL
VSQVYYYQDVKCRDEMFDKDVIMLQIAASKMDPNHFLILVLLRFELFDLFNGNSSSKDQE
VLKQWNRLTEEMLYLIIIIAGERYVPGISHVTKEEVTMREVIHLLCIEPMAHSSLVKSLP
ENENHETGLETVISKVAIFKKPGVSGHGLYELKKECLKKFNPFFYHYSRTQHSKAEEAQK
KRRTQEGSDKALRPPVPPPFSPAFSNIVYLLCCDVFIHILKRIFRRAAEDRSNRWTEPMI
QRALHLVGQALLEEKTQLESSSTEEVTFDFSLKAQKTGTEHGKSLFHFLTEIKSLPSLKA
QNDMILWNLQMFEVVKCLREKSGPVASFSVDHSKLEECVQDKEKAEHKRKAEAAKAHRQK
IMAQMSAMQKNFIESNQMLYDNVPESSSQSDTAASVDSLRMDVDESRVAVGPQQGVCSTD
WEAQICILCQEEQEVQAQAPAMVLTACVQRSTVLTQNRGKTLSPNVGSYPLFMPPDLAVG
THTGSCGHVMHATCWQKYFEAVQNTTRNRLHADLIIDLENGEYMCPLCKSLCNTVIPLIP
VEPSKLNYESAELVGQHLTLERWIQIMSSRIRGLRGTWQTDKNTKEAAREAAAVFDESQA
EFRSILSFGVQESPKFSRSITEMLGVCGTTVHRVGLQTAPNDLCPYVPVMSWNTCAYTIQ
ATENMLEEEGKPLFGSLQNRQLSGLKALVQFSAAQRLKSSQAVIQKHFADMLAVLVPVPN
VENTPSILEVDFFHLLVGLVLSIPALYQEEAVDLQPSAVSTAYNQLYLLHLLTMAHMLQV
LLASHDCAVIGGRGEGDEAQAAAELFSIVSQHTDRLRAGVTGFCVEGVKRGVLPFLRCAA
LFFNCLTGVPPPEELSGTAESPESQLHLLCSYLSLPSNLFQLFQDHRDVVTTLIKRWCEN
TAISKALKGEMQIIRYPHKRNRLIDLPEDYSVLLNQASHFKCPNSSDDERKHPTLCLLCG
VMLCAQSPCCQEQLNGEEVGACTAHAAICGAGVGMFLRVRECEIILMASKTRGSPYPAPY
LDDYGETDPQLGRGNPLHLCPERYRKLLHMWQQHCVLEEISRSLEVLNVMFPFEWQML
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggagtctctgaacggtttacagttgagcacgaaatggcaggaagattca
aacagaggggctgccatactccgctatttaggggagcaagtccctctaatttactgtctg
gagacggagccacaacaaggggaggaggagcgaaaggttgagcaatgcctcctgtatcct
ctggagtgcttcctttttggagaagaaccctgtgttggcctgcagaagctccagcaatcc
aacagcagctcctcagctctgcagtgtggacgcgtctttaaagagggcgagaccgtctac
tcctgcagggattgtgcaatagatcccacctgtgtgctctgcattgaatgcttccagaag
agtgtgcacaaaagtcatcgctacaagatgcatgcctcagcaggaggaggtttctgtgac
tgtggagatttggaggcttggaagagcggaccctgctgctcccaacacgaccctggcacc
tcagtttctatggaaatggatgagtgtgtgatggatccaggcctgcgagaaagggctcag
atgctgttccacctgctgctgcggtacacgacagacatgctggtgtgggaagaaacctat
gagctatcagaggagctgaagccaaaagtgaaagaagacacctacttctgtgtgctctac
aacgatgaacaccactcatatgatcacgtcatctacacacttcagcgcgcgatcgcctgt
gaccagaatcaggcccagatctacactgcacttattgacaaggaagggcggaaagctgtg
aagagagggactctcagatcctgtcaacaagccaaggacaatatcaggcgtaactcggag
cacattatccagatcccattgcgtgtggagatccttcacactgctgtaatggctcatcag
accttcgccctcagacttggcgcatggttccagaagatcattggctacttagttggcctc
agggaggtgttctgtcaggtggctttggagccaggtgctgacaacaatcaactctgcctg
atcagtcgactcatgctgcacgacgccaaactttataaaggagctcgcaaggttgtccac
gagttaattttcagtagtttactaatggacacagaattcaagaggcagtttgccatgaaa
ttcacagagcactacaagcaacttcaggaagactttatcagcgatgaccatcagaggaac
atctcaatcacaggcttatctgtgcagatcttcactgttcccactttggccaggcagctt
atagaggagggcagcgtcatcaaggtcattatagaaactgtaatggatatgatgagggca
catctggacagcagcaaccgcttccaattccagggccacaaccctgacaagttcttccgg
gttcaagttaccttccatgacctcaggtacattttaatcagtaagccctccgtgtggact
gagacgttgagggtgaagttccttgaaggtttacgcgtctttcttcgcttcttatgttgt
atgcaggggatggaggaggtgaagaggcagcttggtcagcacgtggaggtggagcctgag
tgggaggcgggacttaccctccagatgcagctgcgcaacattctggccatgtttcaggac
tggtgttcttctgatgagagggttctgttactggcctttcaggagtgtcacagagctcta
atgtcctgcaccaaccagcccttccgcagcgagccgacagacagctacatgtgcaagcag
atcctccacgcacggccgtataaagtctcccaggagcccgtctccatccatctgcccgtc
tccagactcctggccggtttatatgtgctgctgtgccagactggagccatccaatacctc
cctgactttgtggatcctgtgcagctgaacttcactgagctggcggagcagcctctgcgc
tgtgttgtgctggcggctcaggtgtgtgctgacatgtggcgcagaaacggcctgtcgctc
gtcagccaggtgtattactatcaggatgttaagtgcagggacgaaatgtttgataaggat
gttatcatgttgcagattgctgcttccaaaatggaccccaatcacttcctcattcttgtt
cttttgaggtttgaactctttgatctgtttaatggcaactcctccagtaaagatcaggaa
gtactgaaacagtggaacaggttaacagaggagatgctctacctgataatcatcattgca
ggtgaacggtatgtgcctggaatcagtcatgtgactaaggaggaagtgactatgagggaa
gtcatccatctactttgtattgaacccatggcacatagcagcctggttaaaagcctgcct
gaaaatgaaaaccatgaaacagggcttgaaactgtcatctctaaagttgccattttcaag
aaaccaggagtgtcgggccatggcttgtatgagctgaagaaggaatgtctgaaaaagttt
aaccccttcttctatcattattccagaacacagcatagtaaggcagaagaggctcagaag
aagaggagaacccaagagggcagcgataaagccctccgtcctccagtgccccctcccttc
agtccagcgttctcaaacatagtgtacctgctctgctgtgacgtcttcatccatattctg
aagagaatcttccgtagagcagcagaggaccgttccaaccgatggactgaacccatgatc
cagagggcccttcacctcgtaggccaggctctactggaggaaaaaacgcagttggaaagc
agcagtactgaagaagtgacctttgactttagcctgaaagcacaaaaaactggtacagaa
cacggcaaatctttgttccacttcctgaccgaaattaagtctttaccttctctgaaagct
cagaatgacatgatcttgtggaacttacagatgtttgaggtggtgaagtgtcttcgagag
aaatccggtcctgtagcttcattttctgtggatcacagcaagctggaagagtgtgttcag
gataaagagaaggccgagcacaagaggaaagctgaagctgctaaagcccacaggcagaag
atcatggctcagatgtcggccatgcagaagaacttcatagagtccaaccagatgctttat
gacaacgttcctgagagctcgagtcagagcgacaccgccgcgtctgtggacagcttgagg
atggatgtggatgagagcagggtggctgtgggccctcagcagggcgtttgttccacagac
tgggaggctcagatctgtatcctgtgtcaggaggagcaggaggttcaggctcaggcacca
gccatggtcctcacagcatgtgtgcaaagatctactgttctcacccagaaccgtggaaag
acactctcccctaacgtaggcagctatcccctgttcatgccccctgatctggctgtggga
acacacaccggcagctgtgggcatgtgatgcacgccacctgctggcaaaagtactttgaa
gctgtgcagaacaccactaggaaccggctgcatgcagatctgatcatagacctggagaac
ggcgagtacatgtgtccgctctgcaagtccctctgtaacacggtcatcccactgatccct
gtggagcccagcaagcttaactatgagagtgctgagttagttggtcaacatctcactctg
gagcgctggattcagattatgtcttctcggatcagagggctgagaggtacatggcaaacg
gacaaaaacactaaggaagcggcgagggaagcagcggcagtttttgatgagagtcaagct
gaattccgatccattctcagttttggagttcaagagtcgccgaagttctctcgcagtatc
acagagatgttgggggtctgtgggaccaccgtgcacagggtgggactgcagaccgctccc
aatgacctgtgcccgtacgtgcccgtcatgtcctggaacacgtgtgcctacaccatccag
gccaccgagaatatgttagaggaagaagggaagcctctctttggatccctccagaacaga
cagctgtctggactcaaagcattggtgcagttttccgccgctcagaggctgaagagcagt
caagctgtcattcagaagcattttgctgatatgttagcagtcctggtacctgttcctaat
gtagaaaacacaccatcaatattagaagtggacttctttcatctactggtggggctggtt
ctgtccatcccagcgttgtatcaggaagaggctgtagacctgcagccttcagcagtcagc
acagcgtacaatcaactctacctgctgcacctgctcactatggcacacatgctgcaggtc
ctgctggcctcacacgattgtgctgtaataggagggcggggggagggcgatgaggcccag
gctgcagccgaactcttctctattgtgtctcaacacacagaccggttaagggctggtgtg
actggtttctgtgtagagggtgtaaagagaggtgtgcttcccttcctgcgctgtgctgca
ctgttctttaattgccttactggagtgccccctccagaggagctgtccggtactgcagaa
tcacctgaaagtcagctgcatctgttgtgtagttacctctctttgccctccaacctgttt
caactctttcaggaccacagggatgttgtaaccaccttaataaagaggtggtgtgagaat
acagccatatccaaagccctcaaaggtgaaatgcagatcatcaggtatcctcataagaga
aacaggctaatagatcttccagaggactatagtgtgttgctcaatcaagcaagtcacttt
aaatgcccaaactcatcagatgacgagcgaaagcacccgactctgtgtcttctgtgtggg
gtcatgctgtgtgcacagagcccctgctgtcaggagcagctgaacggggaggaagtgggc
gcgtgcacggcccacgccgccatctgtggggctggagtgggaatgtttctcagggtccga
gagtgtgagatcatcttgatggccagtaagacacggggcagtccctatccagcaccttat
cttgacgactatggagaaacagaccctcagcttgggcgtgggaacccgctgcacttgtgt
ccagagcgataccgcaagttgcttcatatgtggcagcagcactgcgtcctggaggaaatc
tctcgcagtctggaggtcctcaatgtcatgttcccctttgagtggcagatgctttga
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