Carassius gibelio (silver crucian carp): 127976180
Help
Entry
127976180 CDS
T08819
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127976180
03015 mRNA surveillance pathway
127976180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127976180
03041 Spliceosome [BR:
cgib03041
]
127976180
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127976180
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
127976180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
127976180
NCBI-ProteinID:
XP_052436397
LinkDB
All DBs
Position
B17:complement(23670701..23676676)
Genome browser
AA seq
664 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQIRRNTIAGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIAGALLRLAGDERARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTIDERGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERCEAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGVGRTGNRHDVEMEDEEEDVVEEEGEESLEIREREGDQEQEQS
EKDKHEESEQKAEEEDEDEEDVGTSEAKEEGEEQMEVTEVVREDEAQGKLQVESPEATVE
EVGNVQKEEEQETENETQEEVVTDSQQAPESQMEIHPEEGKDPQLDVPAPSVTEHDPKQV
DTVPETQQRPLEPDPEIPQEQSQEPSVQPQEAKADTKEASKETDEARGRAKVSAKRSKSR
SSSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSHGRDRDGRDHKRRRRPS
DRERGKSGSERGHKSSKGSGRESKGSKDKNPKPDKKRMSSEGSRSGRRSSRSERDRKSDR
KDRR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgaagcttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccaagcgagttaagaccgggt
cagattaggagaaataccatcgcaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagtggtggaggacccccagccaaacagagagacatcgca
ggggcactcttgaggctggcaggggatgagcgagcaaggagagattcacgccatgacagc
gacgctgaggacgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaggatcagaccattgatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggaa
tctactgtgtccacagaccggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaacagagctgcggcttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagccc
ccgatcttctacctgccggggcgaatgtgctccgctactcaaaagctcctggaagagtct
cagaaaaaattaaatggtgtgtttgatgagagatgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggagtaggg
cggacaggtaacaggcatgatgtggaaatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagcttagagattagggagagggagggggatcaagagcaggagcagagt
gagaaggataaacatgaggagagtgagcagaaggcagaggaggaagatgaggacgaggag
gatgtaggaacaagtgaggctaaggaagagggggaagagcagatggaggttacagaagtt
gtgagggaagatgaggcacagggtaagttgcaggttgagagtccagaagccacagttgaa
gaggtaggtaatgtgcaaaaggaggaagagcaggagacagagaacgagactcaggaggaa
gttgtaacagactcgcagcaagcccccgaaagccagatggaaatacatcctgaagagggt
aaagatcctcaactggacgtcccggcccctagtgtgacggaacatgaccccaaacaagtt
gacacggtgcctgagacccaacagagaccacttgaacctgacccagaaatccctcaagag
caaagccaagaaccatcagtccaaccacaagaagccaaagcagacacaaaggaagctagc
aaggagaccgatgaggctcgtggacgggccaaagtcagtgccaagaggagcaagagccga
agtagcagcagttcttcttccagttcttcttcaagctcctcctccagtggctccagctcc
tcttccagtggctccagtagcagttcttctggctcttcctcatcgtcttccagttcacgc
tcccgcagtcacggcagggatagagacggccgagaccacaaacgccgccggagaccatca
gacagggagcgtggaaagagcggcagcgagagaggacacaagtcctcaaaaggcagtgga
cgagaaagcaagggctccaaagacaagaaccccaaaccagacaagaaaaggatgagttcg
gaaggaagcaggtcagggaggaggtcctccagaagtgagagggatcggaagtctgatcgg
aaggatcgacgttga
DBGET
integrated database retrieval system
