Carassius gibelio (silver crucian carp): 127976339
Help
Entry
127976339 CDS
T08819
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04519
Cadherin signaling
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
127976339
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127976339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127976339
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
PDZ domain-containing proteins
MAGUK family proteins
127976339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
127976339
NCBI-ProteinID:
XP_052436659
LinkDB
All DBs
Position
B17
Genome browser
AA seq
707 aa
AA seq
DB search
MQKAPLLTLIPHTHSHHTSPHTHTAMMTTSHINGYVTESDGGGGSVGGTDFLEEVVQRHR
EMAVDCPSELGARTLPVRRSAQLERIRQQQEDRRRREEEGRNRQELDLTSSMRLKKLSQN
PKVGIDNPTFEQMEGPGGSIGGLQILTAPPALLELEDLLMSLKQVQHSLNDSQSQEDMEL
VLQLVQKSDFQKAFNIHNAVAHYMNRPSPPYPLTDHAQSLAQEVEVMMHNSSQKEGLELS
TLLKTPHMQALMMAHDSVAEQEMQLEPLVPSVNQSETLTQWGGETVKIVRIEKAKDIPLG
ATVRNDMDSVVISRIVKGGAAEHSGLLHEGDEILEINGVEIRGRDVNEVFDILADMHGVL
TFVLIPSAQIKPPPIKETVMHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPN
WWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKM
QYNANKNDDFDNEEVLTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSSEPDRFA
GAVPHTTRSRRDIEVNGRDYHFVSRQAFEMDTAAGKFIESGEFEKNLYGTSTDSVRQVIN
TGKICLLCVHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKA
REMEQNFGHLFDAAIVNTDLDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcacccctcctaaccctcatacctcacacacactcacaccacacttcacca
cacacacacacagccatgatgaccacctcccacattaacggatatgtgaccgagtcagac
ggtgggggagggagcgtcggaggcactgactttctggaggaggtggtgcagaggcacagg
gagatggcggtggactgccccagtgaactgggtgcccgcaccctgcccgtcagacgcagc
gctcagctggaaaggatccgtcagcagcaggaggaccgcaggagacgggaggaagaaggc
cgcaatcgacaggaactcgacctcacctcatccatgcgcctgaaaaaactctcccagaat
cccaaagtgggcatcgataaccccacctttgagcaaatggaaggtccgggaggctctata
ggtggtctgcaaattctcactgcaccaccagctctactagagctggaggacctgttgatg
tccctcaagcaggtgcagcatagtttgaatgactctcagagtcaagaggacatggagctg
gttctacagctggtccagaagtctgacttccagaaagccttcaacattcataatgctgtg
gcccactatatgaaccggcccagccctccctaccccctgacggatcacgcacagagcctc
gcacaagaggtggaggtcatgatgcacaacagctcgcagaaggaaggacttgagctaagc
accctcctcaaaactcctcacatgcaggcgctaatgatggcccatgacagtgtggctgaa
caggagatgcagctggagcctctagttccttctgtcaatcaaagtgagactctcacccag
tggggcggggagactgtcaaaatcgttcggattgagaaagcaaaggacatcccattgggg
gcgactgttagaaacgatatggatagcgtggtcatcagccgcattgtgaaaggaggagca
gcagagcacagtggccttctgcatgaaggagatgagatcctggagatcaacggtgtggaa
atccgtggcagagatgtcaacgaggtcttcgacatcctggcggacatgcatggcgtactg
acttttgttctcattcccagcgcgcagatcaaaccacctcctattaaagagactgtgatg
catgtcaaagcacattttgactacgacccttcagatgacccatatgttccgtgtcgagaa
ctcggcctgtgctttcagaagggagatatcctccacataatcagtcaagatgaccctaac
tggtggcaggcctacagagatggggatgaagacaaccagccacttgctggcctggtccct
ggcaaaagtttccagcagcagagagaggcaatgaagcaaaccatagaggaggataaagag
cctgagaaatcaggaaaactttggtgtgctaaaaagaacaagaagaagcgaaagaagatg
caatacaatgctaataaaaacgatgactttgataatgaggaggttctcacatatgaagaa
atggctctataccaccagccagccaatcgcaagcggcccattgctctcatcggcccacca
aactgtggtcaaaatgagctccgacaaagactcctctccagtgagccagaccggtttgct
ggtgctgttcctcacaccacacgaagccgtcgcgatattgaggtgaatggccgcgattat
cacttcgtttcccgtcaggcatttgagatggacactgcggcagggaagttcatagagtct
ggagagtttgaaaagaacctctatggcaccagcacagactcagtccgacaagtcatcaac
actggcaaaatctgcctcctctgtgtacacactcagtctttgaaggttttgcggagctca
gacctcaagccctacattatcttcattgctcctccatcccaggagcgattgagagccctc
ttagctaaagacaacaaaaacccaaagcccgaggagctgagagacatcattgagaaggcc
cgtgagatggagcagaacttcggccacttgtttgacgccgccatcgtgaacaccgacctg
gacaaggcctaccaggagctgctgcgtctcatcaataaactagacactgaacctcagtgg
gtcccctcatcctggctgcgctga
DBGET
integrated database retrieval system
