Carassius gibelio (silver crucian carp): 127976624
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Entry
127976624 CDS
T08819
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127976624
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127976624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_31
CUT
HTH_24
HTH_26
NOC3p
Motif
Other DBs
NCBI-GeneID:
127976624
NCBI-ProteinID:
XP_052437143
LinkDB
All DBs
Position
B17:22317383..22335010
Genome browser
AA seq
447 aa
AA seq
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MSHYTDEPRFTIEQIDLLQRLRRSGMTKQEILHALDTLDRLDREHVEKFGHRHVHSGSGA
AGVNHGNDSNATTSSNSCTTSSNNLTASSSTTSKATQTGYRGNGLSPSPSNSYDTSPPPT
VPTPVPVVAPMVQNGRDGLAAMPNGKLSPPRFAVSNTSSRAFAYELPDEEVDIDDKVEEL
MRMDSAIIKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWY
QLEKTTPGATLAMRPTPVALEDIVEWRQTPPPISSTQGSFRLRRGSRFTWRKECLAVMES
YFNDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIE
AAILESHGIDVQSPGGHSNSDEIDGNDYGVPVAADQVLGMDDNTGPIEHQDPIALAVEMA
AVNHSILALARQGGATSDIKTEVLDDE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattacacagatgagcctcgttttaccattgagcagattgacttgctgcagcgg
ctacgtcggagcggcatgacaaagcaagagattttgcatgccctggacaccctcgaccgg
ctggaccgtgagcacgtggagaagttcggccatcgtcacgtccacagcggaagcggggca
gctggcgtcaatcacggcaatgacagcaacgccaccacctcttccaactcctgcactacc
tcctctaacaacctcacagcctcttcttcaacgacctctaaggccacgcagacgggatac
cgtggcaatggcctctctccctccccaagcaacagctatgacacctccccgcccccgacg
gtccccacccccgttccggtagtagcacccatggtccaaaatggacgggacggcctcgcc
gctatgcccaacgggaagctctctccgccccgcttcgctgttagcaacacctcctcgcgg
gcgtttgcatacgagcttccagatgaggaagtggacatcgatgacaaagtcgaggagctc
atgagaatggacagtgctataattaaagaagagattaaagccttcttggggaaccggcgg
atatcacaggcagtagttgcccaagttacaggtatcagtcagagccggatctctcattgg
ctgctccagcagggctcagacctcagcgagcagaagaaaagagctttctaccgctggtac
caactagagaaaactacacctggtgcaacactagcgatgcggcccaccccggtggccctg
gaagacattgtggagtggcgtcaaacccctcctcccattagcagcacccagggcagcttc
cgtctgcggcgaggcagccgcttcacctggaggaaagagtgtctggcggtgatggagagt
tatttcaatgacaaccagtaccccgatgaagccaagcgagaggaaattgccaacgcctgc
aatgcagtgatccagaaaccagggaagaagctttcagatcttgagagggtcacgtctctg
aaagtttacaactggtttgccaacagacggaaggaaattaagagaagagccaacatagaa
gcagcaatcctggagagtcatgggattgatgtccaaagcccgggaggtcattccaacagc
gatgagatcgatggaaatgactacggtgtgccagtagctgccgaccaagttttgggaatg
gatgacaacaccggcccaatcgaacaccaggaccccatagctttggcagtggagatggcg
gctgtcaatcacagcatcctggcactggcgaggcagggcggagccaccagtgacatcaag
acagaggtgctggacgacgagtga
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