Carassius gibelio (silver crucian carp): 127976705
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Entry
127976705 CDS
T08819
Name
(RefSeq) F-box DNA helicase 1-like isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127976705
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127976705
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127976705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
F-box-like
F-box
Viral_helicase1
AAA_30
PhoH
AAA_11
ResIII
AAA_12
AAA_22
Kelch_2
Motif
Other DBs
NCBI-GeneID:
127976705
NCBI-ProteinID:
XP_052437272
LinkDB
All DBs
Position
A4:30665212..30673414
Genome browser
AA seq
1019 aa
AA seq
DB search
MESSMSGRGKRRHLVPSECNDLLQINTGNQSLTQPFNANLSNTDPNRGLQPRTPTKRSRQ
ASGGVGQQRGITDFFSVTGVISTSPQKGSKTPVKEENEEEEPIGHLIPKEENVEEEDYME
GITEDMFEEDFDIGTTSVKKEEELLAVTVKKEEDEEEDLVEALPDAHCGLLGVQEGQEVP
KGHVQDLPEEVLREVFALLPAIDLYRNISLVCHSWRAVVMDPQFLPWKKLYCRYRKREKE
ALKEVKSILEDNQITKKEDLCLLNMVRYMSQFKHSKRVNVKDVLACVKGHQLYAHAEACI
KDRMPDMVDEEGPNPWSAMALMLILADGVKDVLDLVALLQKSGCLLTAGGISEYLWAVAT
LLLAMRKNNINISNRWHYNIFYVLHLMENAPPPAGLQDNRQQITHEQQQILNHDIQNHHV
VKIMAFAGTGKTTTLVKYAQQRSHMRFLYLAFNKSVAMQAQRSFPHNVECSTIHSMAFKA
VGVRYKNMRKLSNNLQVFDVAWILPKGHGGFVNAKVVTQTLHNFCASLDQRVGPQHVPHK
YKNTHGQPEYPDDHQKMTFAGIAQKLWDQMAELKSRRERVYNMTHDGYLKLWQLSRPQLD
RYDAIFIDEAQDCTPVIMGIMLSQNCGKILVGDPHQQIYTFRGAVNALHDVPHTHIYYLT
QSFRFGAEIAYVGAAVLDSCKKVKQILVGGNQDGSVRGEDTQTLQQLKLGQRLPEGSVAI
LSRCNVTVFSEAVRLTDANPNCKIYIVGGVENFGLEKIMDLWVLMQPEDKRKNESLSIKD
YFIKSFCKDKMGGFRGLKGYAMASEDRELEAKLAVVEKYNKRIPELVKRIYDRAQKSAVC
ADFILGTVHKAKGLEFDAVVVTDDFMKVPCARHNLQSVGSFNAANVQDDEWNLLYVAITR
AKRTLYITKTISNILTFTGEYFLRSELTSTLLSKDPSLVCSIDGCENHITADSVLSMSKI
PIRYMDSMDAGGVLCLTCVEQRVGPTAFLLSPPERVRSMTYTNERPDLPINVAMLLSLL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtccatgagcggaaggggaaaacgcaggcacttggtgccctcagaatgtaat
gatctgctgcaaatcaacacagggaaccagtctctcacacagcctttcaatgctaacctc
agcaacacagatccaaaccgaggacttcagcccaggacgcccaccaaaagaagcagacaa
gcttcaggtggtgtgggacaacagagaggcatcactgatttcttctctgtcactggagtc
atcagcaccagcccccaaaaaggctccaaaactccagtgaaggaggagaacgaagaagag
gaaccgatcgggcatcttatcccaaaagaagaaaatgtagaagaggaggactatatggaa
ggaatcactgaggatatgttcgaagaagactttgacataggaactacgtctgttaaaaaa
gaagaagaattgttggcggttacagtgaagaaagaagaggatgaggaggaggacctggtt
gaagccctccctgatgcccactgtgggctgctgggagtgcaggaaggccaggaggtgccc
aagggccatgtgcaggatctgcccgaggaggtcctgagggaagtgttcgcactcctacca
gcgattgacctctatcgaaacatcagcctggtgtgccatagctggagggccgtggtcatg
gacccacagtttctaccttggaagaagttgtactgcagataccgtaagcgggaaaaagag
gccctgaaggaggtgaagtctatcctggaagataaccaaattaccaaaaaggaggatttg
tgtcttctcaatatggtgaggtacatgtctcagttcaaacacagcaaaagggtaaatgtg
aaggatgtgttggcttgtgtgaaaggacatcagctctatgctcatgctgaggcttgcatt
aaagacagaatgccagacatggtggatgaggagggtccaaacccttggtctgccatggcc
ctgatgttgattttggctgatggagtgaaagatgtcttggacctggtagctctgttgcag
aagtctgggtgtcttctgacagcaggaggaatctcggagtacctgtgggctgtggccact
ttgctcctggccatgagaaagaataatattaacataagcaacaggtggcattacaatatc
ttctatgtgctgcacttaatggaaaacgccccccctcctgctggcttgcaagacaacagg
cagcaaatcactcacgagcaacagcagatactcaaccacgacatccagaatcatcacgtt
gttaaaataatggcctttgcaggcactggaaagacgaccacactcgtgaagtatgctcag
caaaggtcacatatgcgcttcctgtacctggcctttaacaaatctgtggcaatgcaagct
cagcgctcatttccacacaacgtcgaatgcagtaccatccattcaatggccttcaaagct
gtgggagtgaggtataaaaacatgagaaaactgtccaataatttgcaagtgtttgatgtg
gcgtggatcttgcctaaaggacacgggggattcgtcaatgctaaagtggtgacacaaacc
ctccacaatttctgcgcatccctagaccagcgcgttggtccacaacatgtcccacataag
tacaagaacacacacggacagccagaatacccagatgaccaccaaaaaatgacatttgct
ggcatcgcacaaaagttatgggaccaaatggcagagctgaagtccagaagagagagagtg
tacaacatgacccatgatggatacctcaaactctggcagctgtcgagaccacagctggac
cgatatgatgccatattcattgatgaagcacaagactgcacaccagtcatcatgggaatt
atgctctctcagaactgtgggaaaatcctggttggagatcctcatcagcagatttacact
ttcagaggagcggttaatgctttgcacgatgttcctcacacacacatctactatctcaca
cagagcttcaggtttggagcagaaatcgcatacgttggtgctgcagtattggacagttgt
aaaaaagtcaagcagatattggttggtgggaatcaggatgggagtgtacgaggcgaggac
acacaaacactacagcaactgaagctgggacagaggctcccagaagggagcgtggccatt
ctgagtcgctgtaatgtcactgttttcagtgaggccgtccgacttacagacgccaacccc
aactgcaagatctacattgtgggaggtgttgaaaactttggactggaaaaaattatggat
ctctgggtcctgatgcaaccagaggacaaacgcaagaatgagagcctttcgatcaaggat
tacttcatcaaaagtttctgcaaagataagatgggcggattcagaggtctgaagggatac
gccatggcctcggaagaccgggagctggaggccaagctagccgtggtggaaaaatacaac
aaacgcattccagagctggttaaacgcatctatgatcgtgcccagaaaagcgcagtgtgc
gcagattttatccttggtactgtgcataaggcaaaaggcctggagttcgacgcagtggtt
gtgaccgatgactttatgaaagtaccatgtgcacgacacaacctgcagagtgtgggcagt
tttaatgcagccaacgtccaagatgacgagtggaacctgttatacgtggcgatcacacga
gccaaaagaacgctgtacatcaccaagaccatcagcaacatcctcacattcactggagag
tactttctgaggtccgagctgaccagcactctgctgagtaaagacccatctctcgtctgc
tccattgacggctgtgagaaccacatcaccgcagactccgtccttagcatgagcaaaatc
cccatcagatatatggacagcatggatgcaggcggcgttctgtgtttgacctgtgtggag
cagcgtgtgggacctacagccttcttgctctctccacctgaacgggtcagatccatgacc
tatacaaatgagagaccagatctacccatcaacgtcgccatgctgctatctttactttaa
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integrated database retrieval system
