KEGG   Carassius gibelio (silver crucian carp): 127977163
Entry
127977163         CDS       T08819                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127977163
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127977163
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgib03021]
    127977163
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127977163
Transcription machinery [BR:cgib03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     127977163
    Little elongation complex (LEC)
     127977163
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4351
Other DBs
NCBI-GeneID: 127977163
NCBI-ProteinID: XP_052437836
LinkDB
Position
B18:complement(12117729..12156410)
AA seq 597 aa
MAALRQEHRYGLSCGKINKSIPNKTIFHVKLTDTAIRTLEAYKNLKGSLPNQPAICFKGN
QGYIKIPASLDSPDAFRVFSFYLSSDSKDKPQASFDCIHQFVSGDGREHLESQGSIQDKI
TVCATDDSYQMTRERMSQVEKDIWSRSAIEIKPGSTRPSKCVKIQKKQGLPTSFDNTNKH
SPSNKRNSTPSLVAHRSLKERVIHVLALKPYSKPELLLWLEREKASPKDKADLNAVLDEV
AKLNPKDHSFTLRDDFYRHVRRDWPGYVEEERQLIQRVLARKLQPLSSSSSSSQLKSLQS
SHSFHKPSEDSPSQLSPVKNLSMKRPVPSDHPESQMPKKQRLLDQNMPLPLSSSMSRSSS
AHGNSSLQRGSSMAQQSPDAHYQRHKLGESNSVPKPEQPEAAQQPSSSPKRPRTEPEICT
DQQLANGQHKKKSKKHKEKERERLKPEWVETSPDLKQNQENISGGLKDHERPNTPVSRAS
PDELPDYLLKYNTITDSEQRQRYKEDFCAEYDEYRDLHERIGKVTEIFVQLGSKIKTLSP
GTHKYKVMEDQIMEKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDRTQAPS
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggcagcgttgagacaggagcatcggtatgggctctcctgtggaaagattaacaaaagc
attcccaataaaaccatctttcacgtcaagctaaccgacacggccatccggacgctggaa
gcttataagaatctcaaggggtccttaccaaatcagccggcaatttgcttcaaggggaac
caggggtatatcaagattcctgcttccttggattctcctgatgcattccgtgtcttctcc
ttctacctgtccagtgacagtaaagacaaacctcaggccagcttcgactgtattcaccag
tttgtttctggagatggcagggagcatctggaaagtcagggcagtattcaggacaaaatc
acggtgtgtgccaccgacgattcctaccagatgacccgcgagcgcatgtctcaagtggaa
aaggacatctggagtcgctcagccatcgagatcaaacctggatccacacgtccaagtaaa
tgtgtgaagattcagaagaaacagggcctgccgaccagctttgacaacactaataaacat
tcacccagcaacaagaggaacagtacacctagcttggtggcccacaggtccttgaaagaa
cgtgtcattcatgttctggccttaaagccctacagcaagccagaactactgctctggctg
gagagggagaaggccagccccaaggacaaggccgacttaaacgctgtgctggatgaggtg
gctaaactcaatcccaaagaccacagctttactttaagggatgatttctacagacatgtg
cggagggactggcccggctatgtcgaggaagagcggcaactcattcaaagggtgttggca
agaaaactccagcctctcagcagcagcagcagcagtagccagttgaaaagcctccagtcc
agccattcattccacaaaccctcagaggattctccatcccagctcagcccagtcaagaat
ctctccatgaaacgcccagtgccttccgaccatccagaaagtcagatgccgaaaaagcaa
cgtttattagaccagaacatgcccttgcctctcagctcctccatgagccgtagctcttcc
gctcatggaaactcaagtttgcagaggggtagcagtatggctcagcagagccctgatgct
cattaccagcggcacaaactcggcgagtccaacagcgtgcccaaaccagaacagccagaa
gcagcacagcagccatcgtccagccccaaacgcccgagaacagaaccagaaatctgcact
gaccagcagctagcaaacggccagcacaaaaagaagtccaagaagcataaagaaaaagag
agggagcgcttaaaacctgagtgggtcgagaccagcccggaccttaaacagaaccaggaa
aatatcagtggtgggttaaaagaccatgaacgacccaacacacctgtctctcgtgcctct
cccgatgagctgcctgactatttattaaaatacaacactatcacagactctgagcagcgg
cagaggtacaaagaggatttctgtgcggaatatgacgagtacagagaccttcatgaacgt
ataggtaaagtcacagagatatttgttcagctgggatccaagataaagacgctgtctccc
gggacacacaagtataaggtaatggaggatcaaataatggagaagtacagaaagtataag
aagaagtttccaggctacagggaagaaaagaagcgctgcgagtatctccaccagaaacta
tcacacatcaaaggcctgattctggactatgaccgcacacaagcgccctcctag

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