Carassius gibelio (silver crucian carp): 127977183
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Entry
127977183 CDS
T08819
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127977183
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127977183
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
127977183
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
127977183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
127977183
NCBI-ProteinID:
XP_052437856
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Position
B18:complement(351487..358810)
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AA seq
368 aa
AA seq
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MKRFFSYKHMSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLSAQFGHY
STTEVLLRAGVSRDARTKVDRTPLHMAASEGHTRIVELLLKHGADVNAKDMLKMSALHWA
TEHSHRDVVELLLRFGADVHAQSKFCKNALDIALDNSCHELAEILQVAMQNQINTNPESP
DTLTIHTATPQFIIGPGGVVNLAGLVSPANSSKSTVVSAEELITADSVDGAIQQVVSSGG
QQVITIVTDGIQLGNLQTGTGLSQPIIVTMPDGQQVLTVSDTEVAEETVVSEEPCVKRPR
VKEEDDAQIQQTLSLEDFQEKVSLLKQLEQANREAQKYRQQFLKKEQEAEAYRQKLEAIT
RQSAKKAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcttcttctcgtataaacatatgtctctggtggatttggggaagaagctcctg
gaagctgctcgggccggtcaggacgatgaggtccggattctgatggcgaatggagctccg
tttaccactgactggctgggcacgtctccgctgcatctgtcggctcagttcggtcattac
tccaccacagaggtgcttctgcgcgccggcgtgagtcgagacgctcgcactaaggtggac
cggactccgctgcacatggctgcgtctgagggtcacacacggatcgtggagctgctgctg
aagcacggcgctgatgtgaacgccaaggacatgctgaagatgagcgcgctgcactgggcc
acggagcacagccacagagacgtggtggagctgcttctgcgcttcggagccgacgtccac
gcgcagagcaagttctgcaaaaacgctctggacatcgcgctggacaacagctgccacgag
ctggccgagatcctgcaggtggcgatgcagaaccagatcaacacaaaccctgagagtcca
gacacactgaccatccacacggccacgccgcagttcatcatcggcccgggaggagtggtc
aacctcgccggactcgtgtcgcccgccaacagcagcaaatccacagtggtgtccgctgag
gagctgatcaccgctgactccgtcgacggcgccatacagcaggtcgtgagctctgggggt
cagcaggtcatcaccatagtaacagacggcattcagctgggcaacctgcagacgggcaca
ggactcagccagcccataatagtcaccatgcctgacggacagcaggtgctgacggtgtcg
gacacagaggtggcggaggagacggtggtgagtgaggagccgtgtgtgaagcgtccgcgt
gtgaaggaggaagacgacgctcagatccagcagacgctctcgctcgaggacttccaggag
aaagtgtctcttctgaagcagctggagcaggcgaaccgcgaggcgcagaaatacagacag
cagttcctgaagaaggagcaggaggccgaggcttacagacagaagctggaggccatcaca
cggcagagcgccaagaaagctgcgtga
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