Carassius gibelio (silver crucian carp): 127977233
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Entry
127977233 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04115
p53 signaling pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04137
Mitophagy - animal
cgib04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127977233
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127977233
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127977233
09143 Cell growth and death
04115 p53 signaling pathway
127977233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127977233
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127977233
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127977233
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
127977233
NCBI-ProteinID:
XP_052437929
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All DBs
Position
B18:8809495..8824334
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AA seq
334 aa
AA seq
DB search
MSATIRLQPVYSWKGVLKLFSCIAARTASKPKEVHTFQRKKIDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctactattagactacagcccgtgtactcatggaagggggtcctcaagctcttc
tcttgcatagcggccagaactgctagtaaacctaaagaggtccacacatttcaaagaaag
aagatagacgtacttggaaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggaacctctaagtgtcccccttctcagcgcgtccctaccttgtcgggcacc
actgcgtccaacagtgacctcgccagcctgttcgagtgtccggtctgttttgactatgtg
ctgccacccatcctgcagtgccagagcgggcatttggtttgtagcaactgccggcccaaa
ctcacctgctgccccacctgcagaggccctctcggttcaatccgcaatctggccatggag
aaagtggccaactcagtgcttttcccatgcaagtatgcctcatcgggctgcgaagtcacc
ctaccgcacacagacaaagctgaacacgaggagctttgtgaatttcggccatactcttgc
ccctgtcctggcgcctcctgcaagtggcagggatctctcgacgccgtcatgccccacttg
ctgcaccagcacaagtccataaccacgctacaaggcgaggatattgtcttcctggccaca
gacatcaacttgcctggggcggtggactgggtcatgatgcagtcatgcttcggcttccat
tttatgctagtgctggagaagcaggagaaatatgatggccaccagcagttctttgccatc
gtgcagctgattggcacacggaaacaggcagaaaacttcgcataccggctggagttgaat
ggccaccggcggcgactcacctgggaagcgacgccacgttcaatccacgagggcatcgcc
accgccatcatgaacagtgactgccttgtgtttgacacctccattgcccagctgtttgca
gagaacggcaacctgggcatcaacgtcaccatatccatgtgctga
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