Carassius gibelio (silver crucian carp): 127977320
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Entry
127977320 CDS
T08819
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127977320
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127977320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
127977320
NCBI-ProteinID:
XP_052438129
LinkDB
All DBs
Position
B18:complement(9019187..9049713)
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AA seq
1715 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTDSSKPLEEDVHPEDGGHRSSAQLKVPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYKRGRDKPPLTDLGVLFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSNATLAVTDICVIIPSKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPTGASI
VCWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEYLTDKQRSQLGLQANGLRP
LGSMTVHTNKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSSLHQQLDEGYQMSREEVQME
AFMSEREPGSGGKSLETLEMEIQEAFLRFMAAILKGYRSYLLPITQAPSEKSTDSSSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSGFPVLNTQLCELQ
DGPRVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVIRGVVLFKQVWRRQT
THPKDTHLSDASDLDSVSHGSLDSSNDLAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNPSPDMKEKKDRNSCPLSKTVLSKKEDSSPMVGIHPSATDGKTSDV
FSEALPKTKRPDSLDIFGEKPIRPSTLDLTPDKTVGEHTNESVPTLIDIEAVGGVVSPPK
VAVERTLSCTVAMEKEHIGIERSVSCSSALGRVVERTGIESGFDPLSLMAAETQAHSEGD
NADTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGRQTPSPHSSPCTSAALSSPITSQ
LQPQPRTRLFSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTLDVFKSS
FLSAGKGVAEKASRLYSRLSSQTSIAQDSDRVSVSSLGSGDPDCSSLIESDSCVDPDGLS
SPQRDAAQPVTRPKRSPYRSNHCLESPSAPPRLYRQSSLTGPPLTVMKAQQTPDACSDSS
LSQSMQNYAVEIRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNV
DIRNLGDQERSPSQDAHSCQTDTTAEQPKVYDATGNLSSNGKKDPEPVTVPYLSPLVLWK
ELESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLASSLPGLYLSSKHYCSVSQPL
QISASEDSKNVLVQILWDNPRLHQDPIKPCYLLWNSYCANPAVFEEEEQAVSPELLQSVV
KSIQRNDVYQPMSQILQLLGTKLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMA
YDRLAPSQVKLTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactactttgtggtggcaggactcaccgactca
tctaagcccctcgaggaagatgtccaccctgaggatggtggccataggagttcagcccag
ctcaaggtgcccatcactgatgtggctgtggtgattcgctccctaggggaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgctgaactgaatggagga
agcctcatggggccgcagatcttcctctgctataagagaggcagagacaaaccgccgctc
acagacctgggagtcctctttgagtggaaggagaaactgaagccggactgtcaaattata
cagaccacaccctctggccgccccgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgagaaccactctaatgccacgctggctgtcacagacatc
tgtgtcattattcccagcaagggagagacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtatctgtgctacaaaaaatcgttggcc
aaaaccaacacacttgcattcaaagcaggtcttttgtccagatatccagaagaggattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgacgggagcgtcgatt
gtgtgctggccctctcataccaaatattctcttcctgtcttttcaacatttgttcttaca
ggcgcttctggagagaaggtttacggtgccgccatccagttctatgagccctacccagaa
gagtatttgactgacaagcagcgatctcagctgggtctgcaggctaacgggctcaggccc
ctaggatccatgactgtccacaccaacaaaagcatctgccttctctctcactggccattt
tttgatgctttccataacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccattgaaaagcatatatcccatttcatgcacaaggttcctttcccttcccca
caaaggccacgtatcctggtacagctgtctccacatgacagcctgatgctgagccagcct
gtgtcctccccactccctctgagtggcggaaggctctctacactgctgttgaacctcggc
ccaaaaaatgcagcgactctgctggtgttggctgtgactgaacataagatcctagttcac
tccttgcgtccagctgttcttaccagcgttaccgaggccctggtgtcgatgatttttccc
ttccactggccttgcccatacattcctctctgcccgctggccctggcagacgtgctcagt
gctccatgccctttcattgtaggggtggactcacggtattttgacctctatgagccaccg
acagacattagctgtgtggacctggacaccaacactataactcacaaagaagaacgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaacaccctcagc
agtctccaccagcaactggatgagggttatcagatgagccgtgaggaagtacagatggag
gccttcatgagtgagcgggaacctggcagtggtgggaaaagtctggaaaccttggagatg
gagatccaggaggctttcctgcgcttcatggcggccatattgaaaggctaccgttcatac
ctgttgcccatcacacaggctccttctgaaaaatcaactgactccagttctctctttgat
ttgcaaggctttttgaagagtcgcgatcgatcccatcaaaagttttactccctcatgacc
aagactcagatgttcattcgtttcatcgaagagtgctcttttgtcagcgataaggatgca
agccttgctttctttgatgactgtgttgacaagttattcggtacggagaaaggggggaag
gtggacagcgataagccagaagacacaaggcttattgaacttgacaaatcccaccgcagc
gagcacacggtctacatcacccctccagagctgccagcacttccagaaggagaagagcca
ccgatggtttatagctacagtggctttcctgtactgaacacccaactctgtgagcttcag
gatggtcccagagtccccaaagcaacatcagccatgagacacatcagtcccatcagccca
gctgccatattcaggcgttcccaacaggagatcaaatcagcccagaggatggctaagacg
tactcctccatcccacagatgtggtccaagtgtctgctgaggcattgtcatggcctgtgg
ttcatctgcctgcccgcgtatgtcagcgcctgccactcgaaggtgcgggcgctgcatact
gcttacgacgtgctcagaaacatgcaggacaaaaagttgcagccccctgatgaggtgtgt
taccgggtcctgatgcagctgtgtgggcagtatgggcagcctgttcttgctgtccgggtt
ctttttgaaatgaagaaagccggagtgcagcctaatgctattacatatggatactacaac
agggccgttctggagagcacatggccttcctccaccagagggggatacttcctttgggga
aagctgagaaatgtgattcggggtgtggtgctattcaaacaagtatggaggaggcagacc
acccacccaaaagacacccatctctctgatgccagtgatctcgacagtgtcagtcatggc
agtctggacagctctaacgatttggcggagcgagtttccattgatacagacttcactaaa
atggactccagtgatgacagatccagcacaggcggtcagtctgatcagggctacgattct
ctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaacccatctccagacatg
aaggagaagaaggacagaaactcttgcccattgtccaagactgtactctcaaagaaagag
gattcatctcctatggttggaatccatccatctgcaaccgatgggaaaaccagtgatgtc
ttttctgaagcccttccaaagacgaaaaggccagactccctggatattttcggggaaaag
cccataaggccaagcactctggatctaaccccagataagacagtaggagaacacaccaac
gaatctgttccaacattgatcgacattgaagcagtggggggtgtcgtgagcccacctaaa
gttgctgtggagaggactcttagctgcacagttgccatggagaaggagcatattggcata
gagaggagcgtgagctgcagcagtgctcttggacgagtggttgagaggacaggtatcgaa
tcagggtttgatcctctgtccctcatggcggctgagactcaagcccacagtgagggcgat
aatgcagacacccctaccgcccgccgagaccttgctgaagagattcaccactacatgaac
aacctgagcagcccgttaagccagcggtctctcagtgtagacctgaagggccgtcagacc
ccatcccctcacagctctccctgcacatctgcagcactcagctcccccatcacctcccaa
ctccaacctcagccacgaacacgactcttctcctcaccctctctcccccagggccgcgtg
cgcagagtcagggagcagcggcccacctccctggcctccccttcctcaccgactccctcc
tcttcctctttctccatggactctctgctcaccccgaccctggacgtgtttaagagcagc
ttcctctctgctgggaagggcgttgctgagaaagccagccgactgtattcgcgactttcc
tctcagacatctatagcacaggactctgaccgggtcagtgtgtcctctctggggtcaggt
gaccctgattgctcctctctgattgagagcgattcctgtgtagaccctgacgggctctct
tccccgcagcgtgacgccgctcaaccggtcacgcgtcccaaaaggagcccttacaggagc
aaccactgcctagaaagcccatctgcaccacctcgactctaccgccagtcctcgctcacc
ggtccaccactgacagtaatgaaagctcagcagaccccagatgcttgttctgattccagc
ctttctcagtccatgcagaactacgctgttgaaatacgcatgtccagttgttcgcgctgt
aacacctgtgagagtttggtgtatgatgaagagatcatggctggttggacagctgatgac
tctaacctcaatagcacatgccccttttgcggctctccatttctgcctctgctcaatgtg
gacatcaggaacctgggtgaccaggaaagatccccctctcaagatgcacattcttgccag
acagacaccacagctgaacaaccaaaagtttatgatgccactggcaatctatctagcaat
ggcaaaaaagaccctgagccagttaccgtgccctatctgagtcctctggtactttggaag
gaactggaaagcttgctggagaacgagggggaccaggccatctcgtctgcagccattgtg
gatcaccaccctattgtgttctggaatctggtgtggtttttccgtaggctggacctggcc
agcagcttgccgggcctctatctgagctccaaacactactgcagtgtttctcagcctctg
caaattagtgcatctgaagacagtaagaatgttttggtccagatcctatgggacaatccc
agactgcatcaggaccccatcaagccttgctacttgctctggaattcatattgtgcaaat
cctgcagtatttgaggaggaggagcaggctgtgagcccagagctgctgcagagtgttgtg
aagagcatccagaggaacgatgtctaccagcccatgagtcagatactgcagctattgggc
accaaactgggcttcgtcagacaacggagcttatatagagatatcctgttcttatctttg
gtggctttgggcaagagtagcataaatattgatgcatttgaccgggaatacaaaatggca
tatgaccgtctggcgccgagccaggtcaagttgacccataactgtgaccgtccacccagt
gctggagtcatggagtgcaggagaaccttcgggctgcccagtctctga
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integrated database retrieval system
