Carassius gibelio (silver crucian carp): 127977327
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Entry
127977327 CDS
T08819
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127977327
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgib01007
]
127977327
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127977327
Enzymes [BR:
cgib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
127977327
Amino acid related enzymes [BR:
cgib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127977327
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127977327
Prokaryotic type
127977327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Hva1_TUDOR
GrpE
Motif
Other DBs
NCBI-GeneID:
127977327
NCBI-ProteinID:
XP_052438145
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All DBs
Position
B18:complement(8918685..8930137)
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AA seq
991 aa
AA seq
DB search
MALHLTFLCSKAFYCCQSPEKTTTSMDSLLTAAQIREKFIDFFRRHEHQYVHSSSTVPLD
DPTLLFANAGMNQFKPIFLNTIDPSHPMARLRRAANTQKCIRAGGKHNDLDDVGKDVYHH
TFFEMLGSWSFGDYFKQLACEMALNLLTKEFGIPIDRLYVTYFGGHADAGLEPDLECKQI
WLDLGMEESRILPGSMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNMDDPNVLEVW
NLVFIQFNRESETVLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFIPYFEAIQKGTG
ARAYTGKVGAEDTDGIDMAYRVLADHARTITIALSDGGRPDNTGRGYVLRRILRRAVRYS
HEKLGAQKGFFASLVDVVVESLGDAFPELRKDPDMVKDIINEEEAQFLKTLSRGRRILDR
KIQSLGDSKTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDMQAFEDEKKAAQLKSQGK
GSGDVDHIMLDIYAIEELRNKGVAATDDSPKYKYTSNDNGNYEFEQAVGTVLALRRERAF
VDEVTTGQECGVLLDKTSFYAEQGGQSFDEGFMLRENDSTEDRMEFTVKNTQVRGGYVLH
IGTVYGTLKVGDRLTLHVDEARRRPIMSNHTATHILNFALRSVLGEADQRGSLVAPDRLR
FDFTAKGAMSTDEVRRTEENASTMIRDAKPVYALDAPLAAAKAIQGLRAVFDETYPDPVR
VVSIGVPVEELLADPNSPAGSLTSIEFCGGTHLQNSGHAAPFVIVSEEAIAKGIRRIVAV
TGAEAQKAQRKADALKLELDAMAEKVKAQNSPNKDIQKEIADMTEALGTAVISQWRKDEM
RDSLKALKKIMDDLDRASKADVQKRVLEKTKEIIESNPNKPLIVMEMENGASAKALNESL
KLLKTNSPQTAAMLFAVDNDAEKIICLCQVPQDVANRGLKASEWVQEVCPLLDGKGGGKD
MSAQATGRNTHCIQEALQLANEFARLKLGEN
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcatctcacttttttatgttccaaagctttctactgttgtcagtcccctgag
aaaaccacaaccagcatggactctttactgactgctgcacagatccgtgagaagttcatc
gacttctttcgccgccatgagcaccagtacgtccactcgtcgtccaccgttccgcttgat
gaccccactctactcttcgccaatgccgggatgaaccagttcaagcccatcttcctgaac
accatcgacccatcccaccctatggccagactccgtcgtgctgcaaatacacagaagtgc
attcgtgccggcggcaaacacaatgaccttgatgatgtgggcaaagatgtgtaccatcat
acattcttcgagatgttgggatcttggtcctttggagattattttaaacaactggcctgc
gagatggcactgaatctgctgacaaaagagtttggtatacctattgaccggctctatgtg
acttattttggtggtcatgctgacgcaggcctggagcctgacctggagtgcaagcagatc
tggctggacttgggaatggaggagagtcgtattctcccggggagcatgaaagataatttc
tgggagatgggggacaccggtccatgtggaccctgtagcgagatccactatgatcgcatt
ggaggcagagatgccgcccacctggtcaacatggatgacccgaatgtgcttgaagtctgg
aaccttgtgttcattcagtttaacagagaatcagagaccgttctaaagcctctgcccaag
aagagcattgacacagggatgggactggagcgcttggtctctgtactacaaaacaagatg
tccaactacgacacagacctgttcatcccttattttgaagccattcagaagggaacaggt
gccagggcatacaccggaaaagttggtgcagaagacacagatggtattgacatggcatac
cgtgtcctggctgatcacgcccgcaccattaccattgccttgtctgatggtggcaggcct
gacaacacgggcaggggctatgtgctgaggaggattctgcgtcgtgccgtgcgatactct
cacgaaaagctgggtgcacagaagggcttctttgcctctttggtagatgtggtggttgaa
tctctgggtgatgctttcccagagctgcggaaggatcctgatatggtaaaagacatcatc
aatgaggaggaggcacagttccttaagacccttagcaggggacgacgcatcctggaccgc
aagatccagagtctgggagacagcaagactataccaggtgacacagcctggctgctgtat
gacacttatggtttccctctggacctcactgccctgatcgctgaggaacgaggaatggga
gtggacatgcaggcctttgaggatgagaagaaagctgcgcagttgaagtctcagggcaaa
ggctccggggacgttgaccacatcatgctggacatctatgccattgaagagctcagaaac
aaaggtgtcgctgccactgatgacagccccaagtacaagtacacttcaaatgataacggc
aactatgagtttgaacaggcagtgggcacagtgctggctctcaggagggagcgtgcattt
gttgatgaggtgaccacaggtcaagagtgtggagtgctgctcgacaaaacctctttctac
gccgagcagggaggccagagctttgatgaaggcttcatgctccgagaaaacgactccact
gaggataggatggagttcactgtgaagaatactcaggtgcgcggagggtacgtgctgcat
atcggtacggtgtacggcaccctgaaggttggagaccgcctaactctgcacgtagacgag
gctcgtcgtaggcccatcatgagtaaccataccgccacgcacatccttaactttgccttg
cgttcagtgctgggagaggcagatcagcgaggctctttggttgctcccgacagattgcgc
tttgacttcacagctaaaggagccatgagcacagatgaagtgcggcgcacagaagagaac
gcctcaaccatgattcgtgatgccaagccggtttatgccctggatgcccctcttgcagca
gctaaagccatccaaggtctgcgggcagtgtttgatgagacgtaccctgatcctgttcga
gtggtgtctattggcgtcccggtggaggagctgctggctgatccaaacagccctgctggc
tcactcacctccatcgaattctgcggcggaacgcacttgcagaactctggtcatgctgca
ccatttgtgatcgtatcagaggaggccatcgctaaaggaatcaggaggattgtggcagtg
actggagcagaggctcagaaggcccagaggaaagccgatgcactgaagcttgaactagat
gccatggcagagaaagtgaaagctcagaacagccctaataaagatattcagaaagagatt
gctgatatgaccgaggccctgggcactgcagtcatctctcagtggcggaaggatgaaatg
agggattccctgaaagctcttaagaagatcatggatgacctggaccgtgccagcaaggct
gatgtacagaagagggtcctggaaaagacaaaggagatcatcgaaagtaacccaaacaaa
cctctaattgtgatggagatggagaatggagcatctgcaaaggctctgaatgagtctctg
aagctgctgaagacaaattcaccacagactgctgctatgctttttgctgtggataacgat
gcggagaaaattatctgcttgtgccaagtgcctcaggatgttgcaaaccgaggcctgaaa
gccagtgagtgggttcaggaagtgtgccctctgctggacggaaaaggaggtggtaaagac
atgtctgcccaggccacgggtagaaacacacactgcatacaggaggctctacagctggcc
aatgagtttgcccgtctcaaactgggtgaaaattaa
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