Carassius gibelio (silver crucian carp): 127977569
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Entry
127977569 CDS
T08819
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127977569
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127977569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127977569
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
127977569
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
127977569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
MMR_HSR1
DUF87
FtsK_SpoIIIE
Dynamin_N
AAA_23
T2SSE
DUF5805
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
127977569
NCBI-ProteinID:
XP_052438464
LinkDB
All DBs
Position
B18:9787185..9814414
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPVEDASYLSKYFFWWTNPIMRKGFKEKLRPSDVYQAPSKDAADILAERLEKEWDRE
VASGRKKPSLLRALARCFIRPFLLFGFLLYIGEATKTVQPQLLGRIIASFDPVHEPERAN
GYFLAFGLGLLFTLRFLLLQPAMFGLHRLGMQIRIALFSIIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCTGLIWELIDVNSFCALAAISLLGVLQAF
LSHKMGPYKAQKVLLTNKRLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEVKLTRKI
GSLRYFYSSAYFFSAIFVIVAAIVPHALSRGINLRRIFTTLSYCMVLRMTVTRQLPGSIQ
MWYDTMRLIWKIEEFLSKEEYKLMQYDLSITELELKDVTASWDEGPGELLERIKQENKAN
GHHNGDAGLFFTNLYVTPVLKDISLNLKKGEMLAVTGSMGSGKSSLLMTILGELVPSSGK
IRHSGRISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPM
AEGGLNLSGGQKARVALARAIYRDADVYLLDAPFTHLDIATEKEIFDKCLCKLMASKTRI
LVTNKIEHLKRADKIILLHNGESFFYGTFSELQSERPDFSSLLLGLEAYDNVSAERRCSI
LTETLHRVSVDESAGMRPERPSYRQVAPSMPVYIDERKSSVIVNTLGAARKASLIQIPEE
EVRRTLPERKFSLVPENELVDESFMGSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRRDH
LQSSFRRRLSVVPQSELASELDIYTRRLSDSTYDITGVLEEENTEACLVDEIDEKEEVFE
TTKWNTYVRYVSNNKSLLYVLIFIFLVAAIEVAGSVAGIFLITDELWKEEHQRVEPNMTK
YSNMSLPGKNYAITVTQTSSYYILYIYVATSESLLAMGFFRGLPFVHTMITISKKLHQKM
LHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTVVVVGCILVVSIVR
PYIFLAATPLVIIFIVMRKYFLRTGQQLKQLETEARSPIFSHLIISLKGLWTIRAFERQA
YFENLFHKTLNTHTATWFLYLSTLRWFLFRADIIFVFFFTLTAWIAVGTNQDKPGEIGIV
ICLAMLILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSETPKPDKSKCSDLIIENVDAQ
ADSSWPNRGQIDVQNLTVKYTEGGHAVLKNLSFTVEGRQRVGILGRTGSGKSSLFNALLK
LVYTDGDISIDGVNWSKVPLQKWRKAFGVVPQKVFIFTGPFRMNLDPYGCHSDEELWRVT
EEVGLKTVIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSILSGARILLLDEPSAHLDPL
TIKVLKRTLRQSFSTCTILLSEHKVEPLLECQSFLMMDKGQVKTYESIQKLLNETSHLKQ
AISPAERLKLFPRRNSSMRTPQSKLSSVTQTLQEEAEDNIQDTRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcacctgtggaggatgccagctacctctcaaaatacttcttctggtggaca
aaccccataatgagaaagggttttaaggagaaactgaggccatctgatgtttatcaagct
cctagtaaagatgctgcagacatccttgcagagcggttggagaaagaatgggacagagaa
gttgcatctggaaggaaaaagcccagtctactacgagcactggcacgatgcttcatacgg
ccttttctgttatttggcttcctcctatatataggcgaggctacaaaaacagtgcagccg
cagcttttagggcggataattgcgtcatttgacccggttcatgaacccgagcgagccaat
ggttactttcttgcctttggtcttggcttgctattcactctccgctttctcctgctccag
cctgccatgtttgggctgcaccgcctgggtatgcagatcaggatcgcactgtttagcata
atctataaaaagaccttgaaactttctagccgagttttggacaagatcagcacaggtcaa
ctggtcagtctgatgtcagccaacctgggcaagtttgatcagagcctgggtatggcccat
tttgtatggatatcaccattgcaatgcatcctgtgtacagggctcatctgggaactcatt
gatgtcaatagcttctgtgcacttgctgctatctctttgctgggtgtgttgcaggccttt
ctttcacataaaatgggtccttacaaagcacaaaaggtgctactgactaacaaacggttg
gctctgacctcagagatcatggagaacctgcattcggtgaaagcctatggctgggaggag
ataatggagaccctcatcaagaacataagacaggatgaggtgaagttgaccaggaagatt
ggctccttgcgctacttctacagctctgcatactttttctcagccatctttgtgattgtg
gcagcgatcgtgcctcatgccctcagccgtggtatcaacctccgtcgcatatttaccact
ctctcctactgtatggtgctgcgcatgactgtcacccgacaactgcccggctccatccag
atgtggtacgacaccatgaggcttatttggaagattgaagaatttcttagcaaggaagaa
tacaagttaatgcaatatgatctcagcatcacagagctggaacttaaagatgtgactgct
tcatgggatgagggtcctggggaacttttggaaaggataaagcaggagaacaaagctaat
ggccatcacaatggagatgcaggcctcttcttcactaacctatatgtgactcccgtactg
aaggacatcagtttgaacctgaagaagggagagatgttggctgttactggttcaatggga
tctgggaagagctcattgttgatgaccatcctcggggagttggttccctcctctgggaag
atcagacacagcggtcgaatctcctactcctcccaaacagcctggatcatgcctggcacc
atccgagacaacatcctttttggtctgacctatgatgagtatcgctacaagagtgtggtc
aaagcatgccagcttgaggaggatctggctgctcttcctgagaaggataagacacctatg
gcagagggggggttaaacttgagtgggggtcagaaggcacgtgtagctctagccagggct
atttacagagatgctgatgtttacctgcttgacgcaccatttactcacctggatattgca
acagaaaaagaaatatttgacaaatgtctctgtaagctgatggcctctaagacacgcatc
ttggtaacaaataagattgagcatttaaagcgggctgataagatcatactgctccacaac
ggtgaaagttttttctacggcaccttttcagagcttcagtcagaacggcctgatttcagc
tctcttcttttgggtttggaggcctacgacaatgtcagtgcagagcgtcgctgctccatc
ctcacagagactctccaccgtgtctcggtggatgagagcgcaggcatgcgacctgaacgc
ccgtcttatcgccaggtggccccatccatgcccgtgtacatagacgaaagaaaatcttca
gttattgtcaacactctcggagcagctcgtaaggcgtccctcattcagatacctgaagaa
gaggttcggaggacattacctgaacgtaagttctccctggtaccagaaaatgagctagtg
gatgagtcctttatgggaagcgatgtgtatcataaccacggagtgcatatggctggtcag
aggaggcagtcggtgttagctttcatgaccaatgcacaaggccagggccgtcgtgaccac
cttcagtcatctttccgcagacggctgtccgttgtgcctcagagcgaactggcatctgag
ctggacatctatactcgccgcctgtcagacagcacgtatgacatcaccggggttctagag
gaagagaacactgaggcatgcttagttgatgaaatagatgaaaaagaggaggtatttgaa
acaacaaagtggaacacatacgtcagatatgtgtcaaataataaaagccttctgtatgtc
ctgatcttcatcttccttgttgctgctattgaggttgcaggatcggtagcagggattttt
ctgataactgatgaactttggaaagaagagcaccaacgagttgagccaaatatgacaaag
tactccaatatgtctttacctggaaaaaactatgccatcactgtgactcagacaagcagc
tattacattctctacatatacgtggcaacatcagagagcctcctcgcgatgggatttttt
cggggtcttccgtttgtgcacactatgatcacaatctccaagaaactgcaccagaagatg
ctgcatgctgttctcagtgcacccatgtctgtgctcaataccatgaagacaggccgaatc
atgaataggttcaccaaagacatggccaccatagatgacatgcttcctctcctcatgttt
gactttgtccagttgactgtggtggtggttggatgtattcttgtggtgtccattgtacgg
ccgtacatatttctcgcagcaactcccctggttattattttcattgttatgaggaagtac
tttctccgaacgggtcaacagcttaaacagctggagacagaagctcgtagccccattttc
tcccacctcatcatctcgctgaagggtttgtggaccatcagggcctttgagcggcaggcc
tacttcgagaacctgttccacaagaccctcaacacccacacggccacctggttcctttac
ctgtcgaccctgcgatggttcctcttccgcgccgacatcatctttgtgttctttttcacg
ctgaccgcctggattgcggtaggaaccaaccaggataaaccgggtgagattggtatcgtc
atatgccttgcgatgctcattctaggcaccttccagtggtgtgttgccaccagcattgcg
gtagatggaatgatgcgttctgttgaccgggtttttaagttcattgacttgccgtctgag
acgcccaaaccggacaaaagcaaatgctcggatctgattattgagaacgtcgatgcacag
gccgactcaagctggcccaaccgtggtcagatcgatgtgcagaatttaacagtcaaatac
acagaagggggtcacgctgtcctcaagaacctctcctttactgtggagggcagacagagg
gtgggtatcttgggccgaacaggttctgggaagagttctctgttcaatgctctcttgaag
ctggtttacacagatggtgatatctccatcgatggggtcaactggagcaaagtgccactt
cagaagtggaggaaagcctttggtgtggtgcctcagaaagtcttcatctttacgggacca
ttccgcatgaacctagacccttacggttgccatagtgatgaggagctgtggcgggtcaca
gaggaggttggtctcaagacagtgattgagcagtttccagataaactggacttccagctg
gaatacggaggttatgtactgagtaacggccacaaacagctcatatgtctggctcgctcc
atcctcagcggagcccgcatcctcctcctggatgagcctagtgcccacctcgatccacta
acaataaaggtgttaaagaggacattacgacagtctttctccacatgcactatattactg
tctgaacacaaagtagaaccgctgctcgagtgccagtctttcttgatgatggacaaaggt
caggtgaagacctatgaatccattcagaagctgctgaatgagaccagtcacctaaagcag
gccataagcccagcggagcgcctcaaactcttccctcgccggaactccagcatgcgcacc
cctcagtccaaactcagctctgttacccagacactgcaggaggaggcagaggacaatatc
caagacactcgtctctga
DBGET
integrated database retrieval system
