Carassius gibelio (silver crucian carp): 127977588
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Entry
127977588 CDS
T08819
Name
(RefSeq) homeobox protein SIX5-like
KO
K19474
homeobox protein SIX5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127977588
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127977588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127977588
NCBI-ProteinID:
XP_052438497
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All DBs
Position
B18:13890490..13897520
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AA seq
998 aa
AA seq
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MSRWGRLTKRRGVTPRAAAALTRLRENGREAQKGREEELEGKKVKIKMASLSLESTEQTE
NGPKESTQDEAKVKEEIDPDEVSEQLLQSFQNSALSFSTDQVACLCEALLQAGNVDRLWR
FLSTIPPSADLLRGNETLLKAQALVAFHREEFNKLYAILDSHDFHPSNHGFLQDLYLKAR
YKEAETSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNALKECYKSNRYPTP
VEKKNLAKVTGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHSTEDETSKGDLDDIVD
KPAVHETGSSNASLISLSGAPCSTGQLILNSTGGFFTSSHPLLLNGSHILSGAGTGVIIN
GLTLSDGHTVTLSPVTANAPLLLNGAQVISKDDRGISDIEAQGSLPTVVLNPQASLTSTI
PLSLSEDTKTASSNVSPLDFISLPEPLKDPDNTQSLPTNSMSSPIISTSVISPTSLPSEA
LVTNSIPASTTGSMSSVISSPMVPLLPTQPPEIVVIGKAESQSPIRSSISSPQVLSLPQV
VPSIQGVPVSQLMQHPSGATVSSCPQLVPVSLNNSQLPQVPIPPFQTQTLHIGPRLAQAH
LQNGSNTLSTSSALSLPQMADGQITQVLTPQLGDESTSAAFPQIQTSMETQVIPISSPTQ
VVPISQTKDSGQPQLVPLSLPQLIPASSIAGTPTGTLSFPQVVPATPSLSIPSPGGAFQI
LTSGSGAGLSVAQGPIRLSPIGPPQSVPAGTIPGVQFLNSGVIQLPSSSPGNILLAGGIG
GSPILSLQNGKLILTIPAGIQFASMPVKSVPDSLVSSTLDPQTSPVHPPSLIAQTSNSLQ
SSHLGLVGSSTLYCSPEPGTIANPTPGASPDTPDSSSTPTPTSVLQFQQTLSPESMLPLS
PICSGVATGHQLSQLAWSPVPLSSPSGLTLFDMRGKGDLPEDPALLGLPGGESLLLGTPP
PGEDVDRDSQLDDVEDMDGDSKILTQLQSVPVDDDLGL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatgggggaggttgacgaaacgcaggggcgtgacgcctcgcgctgcagcagca
ctcactcgcctacgggagaatgggagagaggcacagaaggggagggaggaggaacttgaa
ggaaaaaaagttaaaataaaaatggcttccttgtctttggagtccacagaacaaactgaa
aacggccctaaggagtccacgcaagatgaagccaaagtgaaagaggagattgatccggac
gaagtctcggaacaactgctccaaagcttccagaactccgcgctcagtttttccaccgat
caggtcgcgtgtctgtgcgaagcgctcctgcaagcgggtaatgtggatcgcctgtggaga
ttcctctccaccatccctccttcggccgatctgctacgtggcaacgagaccctactgaag
gcccaggctctggtcgctttccaccgggaggagttcaacaagttgtacgccatcctagac
agtcatgacttccacccgagtaaccatgggttccttcaagacctctacttgaaggcgcgc
tacaaggaggctgagacgtcccggggtcgcagtctgggcgccgtggataaatatcgactg
cgcaaaaagtttcctttgcccaaaaccatttgggacggagaggagacggtgtactgcttc
aaggagaagtcgcgcaatgcgctgaaggagtgttacaagagtaacaggtatcccactccg
gtcgagaagaagaatttagccaaagtcaccggactttcattgactcaagtcagcaactgg
ttcaagaatcgccgacagagggatcggaccccctccggtaccaacagcaaaagtgaatct
gatggaaaccacagtacagaagatgaaaccagcaagggagatctggatgatattgttgac
aaacctgctgttcacgagaccggcagctcaaatgcttctcttatatcactctctggggct
ccttgcagtactggtcagcttattctgaacagcacaggaggattctttacaagctctcat
ccactgctgctcaatgggagccatatactctcaggggcaggaacaggggtcatcatcaat
gggctgacactgagcgatggccacacggtcactctcagtcctgttacagctaatgcacca
ttgctactaaatggggctcaagtaatctccaaagatgaccggggcatcagtgatatagag
gcccaaggcagcctgcccactgtggttctgaatccacaagccagtttaactagcacaata
cctctctcgctcagcgaggacacaaaaacagccagcagcaatgtctctccattggatttc
atcagtcttccagagcccttaaaggatccagataacactcagtcactgcctacaaactca
atgtcttcacccatcatctctacttctgtcatctctcccacgtctcttccttcagaggca
ctggtcacaaatagtattcctgcatcaactactggctccatgagttcagtcatctccagt
cccatggtgccactactgcccacacagccacctgaaattgttgtaataggaaaagccgag
tctcagtcaccaattcgcagctccatctctagccctcaggtgctgtctttaccccaggtg
gttccatcaatacagggtgtaccagtttctcaactgatgcagcatccatctggggccaca
gtgtcatcctgcccccagcttgttccagtctccctgaacaattcacagttaccccaagtc
cccattcctccgtttcagacacagaccttgcacattggtccaagacttgcgcaagcacac
ctccaaaatggctcgaacacattaagcaccagtagtgctttatcactcccccagatggct
gatgggcagattacacaggtgcttacacctcagctaggagacgaatctacttcagcagca
tttccacagatacagacctccatggaaacacaagtcattcccatctcctcgccaactcaa
gttgtgcccatatcccaaaccaaagactcgggccaacctcagctggtccccctgtcactc
ccccaacttatacctgcatcatccattgcgggaactccaactggaaccctgtcctttcct
caggtggtcccagcaacaccatctctctccattccgtcccctggaggtgctttccagatt
ctgacatctggatctggagcaggattgagtgttgcccaaggaccgatacgcctcagtcca
atagggcctcctcagagtgtccctgctggtaccatcccaggtgtccaatttctcaactct
ggggtgattcagctaccttcttcctctccaggcaatatcctactagcaggtggcattggg
ggcagcccaatccttagtcttcaaaatggcaaactcatcctcactatcccagctgggatc
cagttcgccagcatgcctgtcaagtccgtcccagatagtctggtctcaagtacccttgat
cctcaaacctcacctgtacacccaccttcactcattgctcaaacctcaaattcactacaa
tcatctcatttggggcttgttggctcctctacactttactgcagccctgagccaggaaca
attgccaacccaaccccaggagcctctcctgacaccccagactcttctagcactcccact
cctacaagtgtcctacaattccagcagacccttagccctgaaagcatgctcccactcagt
ccaatatgtagtggtgtggcaactggccaccaactctcccagctagcctggagccctgtc
ccgctgtcctccccctctggtctgacattatttgacatgcgtgggaaaggagatcttcca
gaggaccctgctttgttaggtttgccaggaggagagtccctcctgttgggcactcctcct
ccaggcgaagatgtagacagagattctcagctggatgatgtggaggacatggatggggac
tcgaaaattctgacacaactgcagtctgtccctgtggatgatgatctgggtttgtaa
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