Carassius gibelio (silver crucian carp): 127977604
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Entry
127977604 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127977604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127977604
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127977604
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127977604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
127977604
NCBI-ProteinID:
XP_052438521
LinkDB
All DBs
Position
B18:complement(22611691..22665429)
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AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSPPENRRSNSKASKAP
TSSAVSSARGHASRRNSLSLSVGSHSIPDPELEAAGSSGQQGRREGSSTRALKRSSASEP
NITFSPSPAKRPKSVSSHLLESLSSGPSAPTTSPEVTEPRKAPASVSTKSKKRRLAAEPA
PSRALNKKSTSYPGPSGASSTPSQKRKKADASLLSSSSSSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSAATGINSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GAAESRRQDKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGANSKAQQLLQGLQATGDESQQLQAA
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASSGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPGTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLSESEVFLTSPPKACTSGTASLCTTTITTATTTAASNIT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSSNSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFCCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDTVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLISD
PPEGITFDDPSMEVVLLLRVLHSISRYWFYLYDNAAYKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGRQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSVSSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQYFYPEELDQLLCGSKSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccatacacttgcaggaaggttgcagccagagcaagttaac
caaaaagcaaattccccacctgaaaatagaagatctaattctaaggcttccaaagccccg
accagctctgctgtcagctccgcacgtggccacgcctctcgaaggaacagcctctctcta
tctgtgggttcacactcgattccagatccagagttggaagcagcagggtcttctggccag
caggggagacgggagggcagcagcacccgtgctctcaaacgcagctcagcttcagagccc
aacatcaccttttcgcccagcccggccaaacggcctaaatcggtgtccagccaccttttg
gagagtttatccagtgggccatcggcccccacaacctcacctgaagttacagagccgaga
aaggctccagcttctgtcagcaccaagtccaaaaagagacggttagcagccgagccggct
ccctccagggccctgaacaagaagagtacatcctaccctggccccagtggggcctcaagc
accccctctcaaaagcgcaagaaggcagacgcctctttgttgtcatcctcctcttcttcc
tccctccccagctcgagcagcgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtctaaatcagccgcctcagccaaagctgggtgtagc
accgtaactgactcctcctcttcctctgcctcttcctcatcctcctcttcctcttcctcc
tcggccgccacaggcatcaacagctgtgcccctcagggtgcccggctaaaacagggcaag
gaccagagcaaagcacgacggtcacgctctgcatcctccccttctccccgaaggagcagc
cgagataaagagcagagcaaggctgctggctcctccaagtttgactggacatcccgcttc
aactccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgag
acctcctccaaacctgggccctctggactgcaggccaaactagcaagtttgaggaagtcc
actaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgtgccagcaccagtcggcgaggctcaggcttgggcaagcgc
ggagcagccgaatctcgccgacaggataaaatggctgactccgacaacaaccaggatggg
gccaattcatccgccgcgcgcacagaggagacaccacaaggggcgtcagcgtctagctca
gtggctggagcggttggtatgaccacctctggagagagtgaatcagatgactctgaaatg
ggaagattgcaagctcttctggaggccaggggccttcctcctcacctgtttggcccattt
gggccccgtatgtctcagctgtttcataggactatcgggagtggagctaactcaaaggca
caacagctgctgcaggggcttcaggctacaggagacgaatcccagcagctccaggccgct
atagagatgtgccagctgctagtgatgggtaatgaagagacgctgggaggattccctgtc
aagagcgttgtacctgccctgatcacactattacagatggagcataattttgatattatg
aatcatgcgtctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtg
gtggtagacgccatccctgtcttcctggaaaagctacaggtaatccagtttatcgatgtg
gcagagcaagctttgactgccctggagatgttgtcacggaggcacagcaaagccatctta
caggctggaggtctggctgactgtttgctgtacttggagttcttcagcatcaatgctcag
aggaacgcattagccatcgctgctaactgctgccagagcatcacaccggatgagtttcac
ttcgtcgctgactctctgcccctgctcacccagagactcacacatcaggataaaaaatct
gttgaaagcacttgtctctgttttgccaggctggtggacaactttcagcacgaggagaac
ctgttgcagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggtactc
actccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctcgctcatg
tgctccaactgcccatgcctggctgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctactctgtggtgcatccagtggaagctgtcaagagcagattgacctcgttccc
agaagcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctg
cctagagagggcatctttgcggttgacgccatgctgaagaaaggcagtgctcagaccaca
gagggcgccatctggcagtggagagatgaccgaggcctgtggcacccgtataaccgcatc
gacagccgcatcattgaaactgcacaccagaacggggaagacgagataagtctgtcgaca
ctcggccgtgtctacaccattgacttcaactctatgcagcagataaacgaagatactggc
actgcccgagccattcagagaaaacccaaccctctggccaaccccggcacaggagggcac
ttggaggtgcggcgagaggacgcacgcgctcagctgatgaaagaggaccctgagctggcc
aagtgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagctggg
cctgccgtcagacacaagtgccttagagccatcctccggatcatcttcttcgcagatgca
gagctgctaaaagacgtactgcgcaaccatgctgtgtctagccacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctgcagatggcggagatcctcatgcag
aagcttccagatgtgttcagtgtttatttcaggcgggaaggtgttatgcaccaggtaaag
aacctgtctgaatccgaggtgttcctcaccagccctccaaaagcgtgcaccagtggcaca
gctagtctttgcaccaccaccatcacaacagcaaccactacagctgcttctaacatcaca
ccagacttaggctcgcccagtttccagcacagcatggatgactcgctggatctcagtccg
cagggtaggttgagtgatgttctgaaaagaaaacgccttcctaaaagaggaccaaggcgt
cctaagtactccccacccagagatgatgacaaagtggataatcaggctaagagtcctaca
accacacagtcccccaagtcctctttcctggccagtttaaatcccaaaacctggggtaag
ctggggactcagactaacagctccaactcagagccctcacgcactgcaggggtcagtggt
ctggcacgagtgccacccaaggactcggtttcaaacaacagggataagataaaggcttgg
ataaaagaacaagccagcaagtttgtggagcgttactttaattctgagagcgtggatgga
agcaaccctgcactgaatgtcctgcaaagactctgtactgccacagaacagctgaacttg
caggttgacagcggtgtagagtgtctagaggagattagcagtattgtatctgaatcggac
gtgtcctcttttgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgaca
tcaaacagtgaacgggacacgatcagtagagatgagaggatcaagaggttcctgcatgtg
ttcttctgctgcccgataccagggcaggaacctctgggacgtttggacccaacagagaat
ggcccactactggcattggtgcacaagatgaacaactgcctaagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtgggaacggcaacggaagcaggggttcacaagcc
cttaagttcttcaacacacatcagctgaagtgccagctgcaaagacacccagactgcacc
aatgtaaaacagtggaagggtgggccagtcaaaattgaccccttggccctggtacaagct
attgagagataccttgtggttagagggtatggaaggatcagggaggaggatgaagacagt
gatgatgatggttctgatgatgagattgatgaatctttggctgcccagttcttgaattct
gggagtgtacgtcacaggctgcagttctacataggagagcacctgctgccgtacaacatg
actgtttatcaggctgtcaggcagttcagcttgcaggctgaggaggagcgagagagcaca
gatgatgaagcaaatcctctgggacgggctggcatctggaccaaaacacacactatatgg
tataaaccagtcagagaagatgaagagggctgtaaagacactgtcggagggaagaggggt
cgcgcacagacagctcccactaaaacctcccctcgaaatgcaaagaaacaggacgaactg
tggcatgagggtgtgtgtcccagtgtgacaaacccattagagtcatacctcattagtgat
cctccagagggcatcacttttgacgatccttcaatggaggtggttctgctgctgagggtc
ctgcactccatcagcagatactggttctacctgtacgataatgctgcatataaagagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacagggaacatccccacctggctcaccgagctcggcaagacc
tgtccattcttcttcccgtttgacacgcgacagatgctcttctatgtgacggcgtttgac
cgcgatcgcgccatgcagcgcctgctcgacaccaacccagagattaaccagtctgactca
caagacagccgtgtcgctccacgccttgacaggaagaagagaacgataaaccgtgatgag
ctcctgaagcaagcagagtcagtaatgcaagacctcgggagttccagagccatgctggaa
attcaatatgagaacgaggtgggaacaggcctcggacctacgcaagagttctatgctctg
gtgtctcaggagttgcagagggccgatttgggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggaggcaggagggtaccaagtatatgttcagttccagagggttg
tttgctgttccatttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaag
ttccgttttcttggaaaactgatggctaaagcgatcatggacttcagattgttggacttg
cctctaggtttgccattctataagtggatgctgaggcacgagtcctccgtcagctctcat
gacctggtcaacattgatcctggtgtcgccaaatccatccagcacctggaagacatcatc
cgccagaagaagagaatagagcaggacagatcacatacacgggagaccctacagcaggcc
ttggagagtctcaacatgaacggctgctcagtggaagatctgggcctggacttcactctg
cctggattcccaaacattgagttgaagaaagggggcaaagacgtgccagtcaccattcac
aacctggaggaatacctcagattggtggtttactggacactcaatgagggcgtctctcgg
cagtttgagtcctttagggaaggattcgagtctgtctttcctctgcaacacctgcagtac
ttctatcctgaagagctggatcagttgttatgtggcagcaagtcagagtcctgggatgtg
aagacactaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtg
cggttcctgtttgaggtgctgagcagttttgatgcagagcagcagagacttttcctgcag
tttgtcacaggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctc
accatcgttcggaagacgttcgagtcgacggagaacccggacgacttcctcccgtcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgcgcgcgagggccagcagtctttccatctgtcctga
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integrated database retrieval system
