Carassius gibelio (silver crucian carp): 127977605
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Entry
127977605 CDS
T08819
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127977605
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127977605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
127977605
NCBI-ProteinID:
XP_052438527
LinkDB
All DBs
Position
A4:complement(32701789..32725705)
Genome browser
AA seq
2795 aa
AA seq
DB search
MKLKAKPRSHKSENTYRFVTFSERLAKVNIDVIHRIDRTGSYTEEVETYFYEALIKWKDL
NLTDHFKKCFQEVLGKSQSFNMLVFHQNTVVESLKTHLSVKNSMAYQPLLDLVVQLARDL
QMDFYPHFCDFFIIITSILETQDTEVLEWAFTCLSYLYKYLWRMMVKDIDKIYSLYSKLL
AHKKEHIRNFAAESFSFLMRKVSDYDALFTLMFSNLSENPQKARGAGQLIFEMCRGVCNM
FHSCASKALPVVLKKLGPAAGQDVDLPWDSVKEALDHMAESSANYVDKEHLLVLWDSLQG
SLKDVLGKLETSNAAQANEHLERILYIYHTLVEHRKGAKITKAQSVCETLLQLVQAPGLS
YSCHRLLLQVVSALLMGENLSLPASSISELVKKVFSSGMDRDLILSFTKEMFDLKQFEQL
FLPSLLQYLEQLFCMEDSVNRQLVLELLVGLIVSKAPPPTDGSMAFEKYPLVFTVRSTGP
ERDQSVSVPQQILSLIDIPADQPLSDLSHPWAALVLLPHVRPVEASSVIPAVTALLNRLL
QEVCSETLGRGGLFVARQALSTLLSFKETAAVQTLLPAELVRNIIEKHPTDLSALLLGDL
YYTRLALNGCSAQLSHDSLLELYQILHSNFSSNISKIRLLTLRIMSNFEADLPKPAEGEE
SSNAQTVFAVCLQAEQVPATVQDYREKLLHLRKLRHDLVQPCVPKGPLHEVPLRYLIAML
FVNFRPLWDAVIDLLVTHAKEMDNKSFWKVYYEHLEMVAGLAEEELQADDEDDEEGGSEQ
QQAAKQLRGSGTSVIESGDVGVLFLEQLDQMLSPTERTDFTNFRNLLWRAMAQFPDRVEP
RSRELSPLLLRFISNEFYPADLQVAPTQDLMKKSSSSSEQEMDEEVDADMEEDEEKVEDS
KQPKKKIPRKAAAKQLIAHLKVFSKFSNPRALFMEAKLSELYTQLLCHKDQQVQKIALDC
LMTYRDPNILPYKENLERLLDDKHFKDEIVHFNISEEGSVVLPAHRPQLIPMLMRILYGR
MCPRVGNRFQGKANTASRSSIVLRFLAGCQPEEMGMFIDLLLEPVCHHSEGACLAAVERA
VAETNLSAVLPLGRQHSLLNTIEMLIHKMGHLIHMYLPKVLQILLCMTASVSFILDHREQ
LKPGCINPLKNLRRLGILRIQDFFDGFESYSFTADELDAVFQAVVWPKVCLLSTESPYAP
TPLLKVIRVWVQNPRYFPLLAKQRPGHPECDVLLNVFALLSSKNVSAITTAVVMDIAESL
LTTPDYELKENESELIVNNCVIPDPIQSCDVSDSLTIGCRLLLPHIPALLQYLSGVVRNS
ERLKKKQFRSQVSKELNILSKISRFVAEKEQSSTLIGLLLPYLHKPSSVQETELDILGTV
KNLLRQCSEPSVFLKPLSKLFSIIHNRLPRQALCEAFLTLSDMDAELKYITDVVIQLNAF
DSRHLDEVHFDVRLVAFQKVTKLIKEMSTLDMRYLTAIMHNCFHSLEIGDMSLADSATMC
LSAVITQLSEVGCPEAEYKEIVQYTILDAIRKGLKSKTESVRNDYTTVLACLVKTFPNRS
EFHDLVQLTDYNDLESDFFEHMKHIQVYRRGRALRKFARQLTEGKIVMSSRSMQNYIMPY
AMIALVDEKLLKYEPMTTAAVEVIGAVCRRLTWSKYLYYLKHFVHVLQSGIAEQKLAVSL
LLTVLDAFHFDHESLSKEIEAAKKKKTEASEPSVVEEAEDEAVEAMDTDESDAEDAMETA
EAGAAVSTATDAETEGPAKPKEGKKSQMKKVPPVVSSGLPQSERDLETLISTIHHTVTQS
VLPKLHKCLTAKVKRDDEHKMVKSKEVKDEEVARVPIAFAMIQLMKSLPKDVMEANLPGI
FLKVCVHLRSRFQEIRDVARNTLMKIIESLGHQYLHYLLSELQAVLVKGYQVHVLTFTVY
HLLTVLKPSLNGGDLDPCMDMLITIFNNELFGAVAEEKDIRGIVSKVMEARHSKSSDSYE
LLGQFCSQERVIHLILPLKEMLENTASLKVSRRVHAVLRRIVAGLLLNESMSPQSILLLS
HGLVSESLPLITSKNKEKRRPPPDPRLPPPSCLLLPANPKRGGAKAAISSRTNMHILVEA
GLSLLHCSLKSSKINSSVPSVKEMLDPFVPLLLDCLNSMHVKVITEALQAFIWILKFPLP
AVEQNYDQMTKQLFVLLKDYAKAGAGRGENFHLVQNCFKAITVLVKSMTKPVTQTQLQVL
LGYAEEDIYDNSRQATAFGLLRAILSRKLVVPEMEDVMKKVAKFAIDGSNEQVRMRCRQI
YLKYLMDYPLGKKLRNHFDFIVSQLTYEYDTGRQSALELMAFIFQKFPQALLHEHCGLFF
VPLSLAMLNDDSAACKKMVALAIKSLLNQLDLQHQNSMFNLVNTWLTGEKPALRRLGAQV
CGLFVEVEGEKFIRRLDVLIPLIEKEIHTSNFEDIEEEEDEKAADRLLFCYLTLIVKLIK
DCGFLELHKPADLLSNIWSHIDSHLRYPHCWVWLTASQILGLLFAAHKPEELLALWSSQE
STSKTTQPVASASLTENLSQKMRELVLSFCYQLQSKFLDISAGEQVVKNLLYVAKVIYLL
SPESDTVNPAEEQEGEEKETTDNTEENEEEEDKKQKLEDEQNENKPPSLLWVMKKLSLLA
KREAADTPKVPLKRTCVFKFLGAIAVDLGKDCLGPYLTTIIAPLYRELDSTYADQDPTLK
NLAQELIELLKKLVGLERFSLAFAAVQKEASQRRTSRKKAKAMQAVVNPDVAARKKIKKQ
FKKNEAKKRKILFVRTGHKAKKHKSTSLKDLAIIS
NT seq
8388 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaagccaagccgcgatctcataaatcggaaaacacttaccgctttgtgacg
ttttctgagaggctagcgaaagtaaacattgatgtcattcatcgcattgacagaactgga
agttatacagaggaggtagaaacctatttttatgaagccctaataaaatggaaagacctg
aatttgacagatcatttcaagaagtgttttcaagaggttttaggcaagagtcagtctttc
aacatgctggtgttccaccaaaacactgttgtggagagtctgaagacccacctgtcagtg
aagaacagcatggcttaccaacctcttctagatcttgtagttcagcttgctcgcgacctc
cagatggacttttaccctcatttctgcgactttttcatcatcatcacgtctatactggaa
acacaagacaccgaggtgttggaatgggccttcacgtgtctgtcatacctgtacaaatac
ctgtggaggatgatggtgaaggatattgacaagatatacagtctttacagtaagctcttg
gcgcacaagaaggaacacatccgcaactttgctgccgagagcttctcttttttgatgaga
aaggtgtccgattatgatgctctcttcacacttatgttctccaacctgtctgagaaccct
cagaaggccagaggagcaggtcagctgatctttgagatgtgtcgaggagtctgtaacatg
ttccactcctgtgcctcgaaggctcttccagtggtgttgaagaaacttggcccagcagcc
ggtcaggatgttgatttgccttgggattcagtaaaagaagctctggatcacatggctgag
tcttcagccaactatgttgacaaggaacacctgctggtcctgtgggactccttacaaggc
tctctgaaagacgttcttggaaagttagagacgagcaatgctgctcaggctaatgagcac
ctggagaggattctgtacatctaccatacgcttgtggagcatcgcaaaggagcaaaaatc
acaaaagcacagtctgtttgtgagacacttcttcagttagttcaggcaccaggactgtcc
tactcctgccacaggctgcttttacaagtggtctcggctctgttgatgggagagaatctg
tcgttacctgccagcagcatcagtgaactggtgaaaaaggtcttcagtagcggcatggac
cgagacctcatattgtcatttaccaaagagatgtttgacctgaaacagtttgagcagttg
ttcttgcccagtttgctgcagtatctggagcagctcttctgcatggaggactctgtaaac
cgacagctggttctggagctgctggttggtctgattgtgtccaaagctccgccccccaca
gatggctccatggcttttgaaaagtacccattggttttcactgtcaggtccactggacct
gaaagagaccagtcggtctccgttccccaacagattctttctctcatagacatccctgcc
gatcaaccgctctctgacctttctcacccctgggctgcactggtgctgctcccacatgtt
aggccagtagaagcatcaagcgttataccagccgtcactgcacttctgaacagattactg
caggaggtgtgcagtgaaactctggggagaggagggctgtttgtagcacggcaggctcta
agcaccctgctcagcttcaaggagacggcagcggtgcagacacttctgcctgcagagttg
gttagaaacatcatcgagaaacaccctacggatctttcagcactgctgttaggagatctg
tactacaccagactggcactgaacggctgctcagctcagctgtcccatgattctctgctg
gaattataccagatacttcattccaatttttcttccaacatctcaaagatccgtttgctg
accctcagaattatgtcaaactttgaggctgatcttcctaaaccagcagagggagaggag
agctcaaatgcgcagacggtgttcgccgtgtgtctgcaggcggagcaggtcccggccaca
gtccaggactacagggagaaactactacaccttcgtaaactccgtcatgacctggtgcag
ccctgtgtgcctaaaggacctttacatgaggttcctcttcgttatcttattgcaatgctg
tttgtcaatttccgacctctctgggatgcagttattgatctgttggtgacccacgctaaa
gaaatggacaacaagtcattctggaaggtctattatgaacacctggagatggttgctggt
ctagctgaggaagagcttcaggcagatgatgaagatgatgaggagggaggcagtgaacaa
cagcaagcagcaaagcagcttcgaggttcggggaccagtgtgatcgaaagcggggatgtg
ggagttttgtttctggaacagctggaccagatgttgagtcccactgagcggactgatttc
acaaacttccgcaacctgctttggcgagcaatggcccagtttcccgacagagtggaacca
cgtagtcgagagctcagcccattactgctacgcttcatcagtaatgagttctacccagct
gacctgcaggtggctccaacacaggacctcatgaagaagagcagctcttcatcagagcag
gaaatggatgaagaggtagatgctgacatggaggaagatgaagagaaggtggaggattcc
aaacaacccaagaaaaagatcccaagaaaagcagcagcgaagcaactcattgctcacttg
aaggtcttctccaaattctctaacccgagagctttatttatggaggcaaaattaagtgaa
ctgtatacccagcttctgtgccataaagaccaacaagtccagaaaatagcactggactgt
ttgatgacatacagagaccctaacattctcccttacaaagagaatctggagagacttttg
gatgacaagcattttaaagatgagattgtccatttcaacatctcagaggaaggttccgtg
gtacttccggcacacagaccccaacttattcccatgcttatgaggatactatatgggcgg
atgtgccctagggttggtaataggtttcagggtaaggcgaacacagcttcacgctcctcc
atagtgctgcgcttcctggcaggctgtcagccagaagagatgggcatgtttatagatcta
ctgctggagcctgtttgtcatcattctgaaggagcgtgtctggctgcagtagaacgagct
gtagctgagacgaacctgtctgctgttctccctctgggtcgccagcacagccttctcaac
accatagaaatgctcattcataaaatgggccatctcatccacatgtacttgcccaaagtt
ctgcagatcctgctgtgcatgacggcctcagtgtcatttatactggatcacagagagcag
ctcaaacctggttgcatcaatcctctgaagaacttgcggcgtctggggattctgcgcata
caagacttctttgatggatttgagtcttacagcttcactgcagatgagctggacgctgtg
tttcaagccgtggtgtggcctaaggtgtgtcttctgtccactgaaagcccgtatgcacca
acgcccctcttgaaagtcatccgtgtgtgggtccaaaatcctagatatttccctttgctt
gctaagcagagacctggccaccctgagtgtgatgtcctgctcaatgtgtttgctctgtta
tcctccaaaaacgtgtctgccatcacgacggctgtggtgatggacatagccgagagcttg
ctgaccactccagactatgaactcaaggagaatgaatcagagctgattgtgaataactgt
gtgatccccgatcccattcagagctgtgacgtttcagattctttgactatcggctgccgt
ctgctccttcctcacatcccagcactgctgcagtacctcagcggagtcgtgcgtaactct
gaacgcctcaagaagaagcaattcagatctcaagtcagcaaagagctcaacatcctctca
aagatcagtagatttgtggctgaaaaagaacagagttcaacactcattggtttgcttctg
ccttaccttcacaaacccagttctgttcaggaaacggagctggacatcctgggtacggtg
aagaatctgttgagacagtgttcagagcccagcgtgttcctcaaacctctcagcaagctt
ttctccatcatccacaacagacttccccgtcaggcgctgtgtgaagcgtttctaactctg
tcagacatggatgctgaactgaagtacatcacagatgttgtgattcagctcaacgcgttt
gatagccgccatctggacgaggttcactttgacgtgcgtctcgtggcgttccagaaggtc
accaagctcattaaagagatgagcactctggatatgagatacctgactgctatcatgcac
aactgtttccattcattagagatcggtgacatgtctctggcagacagcgccaccatgtgt
ttgtcagctgtaataacgcagctctctgaagtcggatgcccagaggcagaatacaaggag
atcgtgcagtacaccatactggatgcaatacgaaagggtttgaagagcaagactgagagt
gtgagaaatgattacactacggttctggcctgcctggtgaaaaccttcccaaaccgatct
gagtttcatgatctggtgcaactgacggactataatgatctcgagtccgatttcttcgag
catatgaagcacatacaggtttacagaaggggtcgagcactcaggaagttcgccaggcag
ctgacggagggcaagattgtgatgtcatcacgctccatgcagaattacatcatgccctat
gccatgatcgctctagttgatgaaaaactgctgaagtatgaacccatgacaacagccgcc
gtggaagttattggagccgtgtgcagacgcttgacctggtccaagtacttatactacctc
aaacacttcgtccatgttctacaaagcggaatagctgagcagaaactggctgtcagcttg
ttgctgactgttcttgatgcgttccactttgaccatgagagtctcagtaaagaaatcgag
gcggccaagaaaaagaagacggaggcttcagagcccagtgttgtggaagaggccgaggac
gaggcagtggaagccatggacacggatgagagtgatgctgaagatgccatggaaaccgct
gaggctggagcggccgtttccacagcaacagatgctgagacggaaggccctgccaaacca
aaagaaggcaaaaagagccagatgaagaaagttccccctgtggtcagcagtggtcttcca
cagagtgaaagggatctagagacgctcatttccaccattcatcacacggtcactcagagc
gtcctgcccaaacttcacaagtgcctcacagcaaaggttaaacgagacgacgagcacaag
atggtgaagtctaaggaagtgaaagatgaagaagtggccagagtgcctattgcattcgcc
atgattcagctcatgaagtctctgccaaaggatgtgatggaagccaacttgccaggcatc
ttcctgaaagtgtgcgtccacctgaggagccgtttccaggagatccgtgatgtggctcga
aatactttgatgaagatcatagagtcgcttgggcatcaatatcttcattatctgctcagc
gagttgcaggcggtcttagtgaaggggtatcaggtccatgttttgaccttcaccgtctac
catttgctcactgtcctaaaaccttccttgaatggaggggatctcgacccatgcatggac
atgctcatcacgatcttcaacaacgagttgttcggggctgtagctgaggagaaggacatc
agaggaatcgtttccaaagtgatggaggcccgtcacagcaagagctccgactcgtacgag
cttctcggccagttctgcagtcaggagcgcgtcattcacctcatcctgccactcaaagag
atgcttgaaaacacggccagtctgaaggtgtcaaggcgagtgcatgctgtgctcaggagg
attgtggcgggacttttgctcaatgagagcatgagccctcagtccatcctactgctcagc
catggactcgtcagtgagagtctgccgctcatcaccagcaaaaacaaagagaagcgacgt
ccccctccagatccccgcctgcctcctccaagctgtttactgctgccggccaatcctaag
agaggaggagcgaaagcagccatcagcagcagaactaacatgcacatcctggtggaagca
gggctcagtttgcttcactgtagtctgaagagttcaaagatcaactcctctgtcccgtca
gtaaaggagatgctggatcctttcgtacctctcctcctggactgtctcaactccatgcat
gtgaaggtgataaccgaggctctgcaggccttcatctggatcctgaagtttcctctgccg
gcggtggagcagaattacgatcagatgaccaagcagctctttgtcctgctgaaggactac
gctaaagctggagccggccgcggagagaacttccacctggttcagaactgctttaaggcc
ataactgtgctggtgaagagcatgacaaaacctgtaacgcaaacacagctgcaagtgctt
ctgggatatgctgaggaggacatttatgataactcgcggcaagcaacagcgtttggcctc
ctgagggcgatcctctccaggaaactggtggtgccggagatggaggatgtgatgaaaaaa
gtggccaagtttgccatcgacggctcaaacgagcaggtccgcatgcgctgcagacagatc
tatctgaagtacctgatggactatccactgggcaagaaactcaggaatcattttgacttc
atagtgtctcagctcacttatgaatatgacactgggagacagtctgccctggagctgatg
gctttcattttccagaaatttcctcaggctctcttgcacgagcactgcggtttgtttttt
gtgcctctgtcgctggccatgttaaacgacgattctgcagcctgtaagaaaatggtggct
ctggccatcaagtctctgctgaatcagctggatctacagcatcagaactccatgtttaac
ctggtcaacacctggcttaccggcgagaagccggctctgcggcgactcggcgctcaggtt
tgtgggctgtttgtggaagttgaaggggagaagttcatccggagactggatgtcctgata
cctctcattgagaaagagatccacacttccaactttgaggacattgaggaagaggaggat
gagaaggctgcagacagactgctgttctgttacctcacgctcatcgtcaaactcatcaaa
gactgcggctttctggagctccacaaacctgcagacctgctcagcaacatctggagtcat
attgattcccatctacgttaccctcactgctgggtctggctgacggcgtctcagatctta
ggtttgctgtttgctgctcataaaccagaggagctcttggccttatggagctctcaggag
agcacgagtaaaaccacgcagcccgtggccagcgcttctctcactgaaaacctgtctcag
aagatgagagagctggtcctgtccttctgttaccaactgcagtccaagttcttggatatt
tctgctggagagcaggtggtgaagaacttactttacgtggctaaggtgatctacctcctc
tcaccggagtctgacaccgtgaatccagctgaagaacaagagggtgaggagaaagaaacg
actgataacacggaggagaacgaagaggaggaagataagaagcagaagcttgaggatgaa
cagaatgagaacaagcctccgtctcttctctgggtgatgaagaagctttcattactggcc
aaaagagaagcagcagacacacccaaagtgcctttgaagagaacttgtgtttttaagttc
ttgggagccatagctgtggatctcgggaaagattgccttgggccgtatctgaccactatc
atcgctcctctctacagagagctggacagcacgtatgcagaccaagaccccacactgaag
aatctggctcaggagttgatcgagttgttgaagaagctggtcggtctggagcgattctct
ctggctttcgccgcagtgcagaaggaagcctctcagagacgaacctcacgcaaaaaagcc
aaggccatgcaggctgttgtaaatcctgacgttgctgccagaaagaagataaagaagcag
ttcaagaaaaacgaggccaaaaagcggaaaatcttgtttgtgcgcacaggacataaagca
aagaaacacaaaagcacatcactgaaagacttggctataatcagctga
DBGET
integrated database retrieval system
