Carassius gibelio (silver crucian carp): 127977668
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Entry
127977668 CDS
T08819
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127977668 (zgc:173742)
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127977668 (zgc:173742)
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Topoisomerases
127977668 (zgc:173742)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Endonuc_Holl
Motif
Other DBs
NCBI-GeneID:
127977668
NCBI-ProteinID:
XP_052438612
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Position
B18:6912038..6942933
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AA seq
768 aa
AA seq
DB search
MLSSQINFKRTCNFLLIFVGSEGMAEESNSVKAVGKESKDNPGSNGDALVVKPKKKKAKA
KGKAKPQHEGTEKTHRKMKTPKEESMDFEDRGDRRSQVNVKEEPEEDPDFVTKGKGKKRK
RKVDNMDGPSSTSEAPLPKKKKKKAAEEGQENSATVKKKIKGKKEKVIKEEGGRSVSTKK
KKTKEEIEAARALKLKKKEEEEKQRWRWWEEEKYEDGVKWKFLEHKGPYFPPKYQALPDD
VRFYYNGKPVKLSLPAEEVALFFAQMLDHEYTTKDVFRNNFFRDWRKEMTLEERQLIMDL
NKCDFGELHAMHKQKVEARKNLSKEEKLVKKEANQKIVDEYGYCVLDHHRERIGNFNIEP
PGLFRGRGDHPKQGMLKKRVQPEDVIINCSKDSRIPEPPAGHRWKEVRHDNTVTWLASWN
ENVQGSCKYVMLNANSKLKGEKDWEKYEVARKLKTCVDAIRAQYQEDLKSKQMGTRQRAV
ALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHITLHDTLEGQKCVVEFDFLGKDCIRY
YNKVPVTKKVFKNLKLFMENKQEGDDLFDRLNTQLLNKHLSSLMPGLTAKVFRTYNASIT
LQQQLKELSNMKENAAEKLLSYNRANRAVAILCNHQRAPPKTFEQSMANLQAKIDSRKEQ
LDLAKKELKQAKKEAKGSSDNKLLIVVEKKKKAVQRCEEQLLKMEVQATDREENKQIALS
TSKLNYLDPRISVAWCKNMEVPLDKIYNKTLRDKFAWAIDMTEHDFVF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgagtcaaataaacttcaaacgcacatgcaattttttattaatatttgttgga
tcagaagggatggcagaagaatctaactccgtgaaagctgtgggaaaggagtccaaagat
aatccaggctcaaatggagatgcacttgtagtaaagcccaagaaaaagaaagcaaaggcc
aaaggcaaggcgaagcctcagcacgaagggacggagaaaacacacaggaagatgaaaacg
cctaaagaagagagcatggactttgaagaccgtggtgacagaaggtctcaggtgaatgtg
aaggaagagccagaggaagatccagactttgtaacaaaagggaaagggaaaaagaggaaa
agaaaggtggataacatggatggtccttcttctacctctgaagctcctttgccaaagaag
aagaagaagaaagctgcagaagagggacaggaaaactctgcaacggtgaagaaaaagatc
aagggaaaaaaagaaaaggtgataaaagaggaaggagggcgttctgtctccactaagaag
aaaaaaaccaaggaagagatcgaggcagccagggctctcaagcttaagaagaaagaagag
gaagagaaacaaagatggagatggtgggaagaggagaagtatgaggatggagttaaatgg
aagtttctagaacacaaagggccgtatttccctcccaaatatcaagcccttccagatgat
gtcaggttttactataacggaaagccagtgaagctcagcctgccagctgaagaagtggct
cttttctttgctcagatgctggatcatgaatacaccacaaaagacgtcttccgcaacaac
tttttcagggactggaggaaggagatgactttggaggagagacagctaataatggatctg
aacaagtgtgattttggggaactccacgctatgcataaacagaaggtggaagccaggaag
aacttgagcaaagaggagaagttggttaaaaaagaggctaatcaaaaaattgttgatgag
tatggatactgcgtgttggaccaccatcgtgaacgcatcgggaactttaatattgaacct
ccagggcttttccgaggcagaggagaccatcctaaacagggaatgctgaagaagagggtt
cagcctgaagacgtcatcatcaactgcagcaaggactctcgtatcccagaacccccagct
ggtcatcgctggaaggaagtccgtcacgacaacaccgtaacatggctagcaagctggaac
gagaatgtgcaaggatcttgtaaatatgtgatgctcaatgccaactctaaacttaagggt
gagaaggattgggaaaagtatgaggtggctcgtaaactgaagacatgtgtggatgccatc
cgagcccagtaccaggaggacctcaagtccaaacagatgggcacacgccagcgagccgtt
gccctctactttattgacaagctggctctgagagcaggtaatgaaaaggaagagggcgag
acggcagacactgtgggttgttgctcactacgtgtggagcacatcactttacatgacaca
ctggaaggtcagaagtgtgtggtagagttcgacttcctgggtaaagattgcatccgctac
tacaacaaggtcccagtgaccaaaaaggttttcaaaaacctcaagcttttcatggaaaac
aagcaagaaggagacgacctctttgatcgactcaatactcaactgctgaataaacacctg
agttccctcatgccaggattgactgcaaaggtttttaggacatataacgcctccataacc
ctgcagcaacagctgaaagaactcagcaacatgaaggaaaatgcggcagagaagttgctc
tcctacaacagggcaaaccgtgcggttgcaattctatgtaaccatcagcgggcgccgcca
aagaccttcgaacagtccatggctaacctgcaggcaaagattgacagcaggaaggagcag
ctggacttggctaagaaagagctaaagcaggccaagaaagaagccaaagggagctcagac
aacaagctgctcattgtggtggagaagaagaagaaagctgtgcagaggtgtgaggaacag
ctgctgaagatggaggttcaggctacagaccgagaggagaacaaacagatcgccctgagc
acctccaaactcaactacctggatccacgcatcagtgtggcctggtgtaagaacatggag
gtgccgctggataaaatttacaacaaaaccctgagggataagtttgcctgggccatcgac
atgactgaacatgactttgtgttctaa
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