Carassius gibelio (silver crucian carp): 127977710
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Entry
127977710 CDS
T08819
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127977710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127977710
03036 Chromosome and associated proteins [BR:
cgib03036
]
127977710
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127977710
Coactivators
SAGA/TFTC/STAGA complex
127977710
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127977710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
127977710
NCBI-ProteinID:
XP_052438687
LinkDB
All DBs
Position
B18:1501227..1580988
Genome browser
AA seq
878 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGQSEPPAARKSSARQQQTGGTAPADSP
SEPQQQAQQQQNARRAARNPDSDPKDASMDKHSKALEKESPLKSHGSIIIITTAAAAAAS
DAPAPGNKGESPRDTRKKHPGNTRALRSAASHSLNGNGGDAASAPASASSPSTTVTVSSN
PQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARINHSKTPADNNAMPAA
TSASAAPVKPAVSVSAPAVIRPAQTQTQTHAHAQQRAVTPQLIVRPPQQQTTIQLPPGFT
IPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSVATFRVTTPQSPVSTQAIR
PAPAAQTKSVQSSSPSVPAQTSAAAGPAKGPVAAAVAVTAPQQVQPASGPQGPLTQMPLA
PQSAAAPAPGAPLVSQEMQDNVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAK
IDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTVPLQPNKTSVTPVQT
GVSVRPHQPNSTTVLPQGIKRAVGAGGQIRMPVVITQTVRTTGALGKPAAIQTGKSPAGV
TIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSDLVGTQIRSCK
DEAFLSTGLLHRRILETAKRFGVTDVPLETVNFISHATQSRLRTVLEKVSSIAQHRMDSC
KEDEWLEQASDVRSQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATTTEVSGSSAGSPSGSLTPSSSS
RQYNRQRITRVSLRDFIFYMEQERNTSRSLLLYRALLK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagtgatctggtgggctcgctggagtctcagctggggggccagagcgagccgcccgcc
gcgcgcaagagcagcgcgagacagcagcagacaggaggaacagctcctgcagactctcca
tcagaaccacaacaacaagcgcagcagcaacagaacgcgcggagagcagcgcgcaacccg
gattctgacccgaaagacgccagcatggataagcactccaaagccttggagaaagagagc
cctctgaagtcgcacggcagcatcatcatcatcactacagcagcagcagcagcagcatcc
gacgctcctgcaccgggcaacaaaggtgagagcccgagggacacccgcaagaagcatcca
gggaatacgcgcgcgctgcgctccgcagcatcccacagtctcaacggcaacggaggcgac
gcagcatcagcaccagcatcagcatcctcacccagcaccactgtcaccgtgtccagtaac
ccgcaggcgatcgcgctggaccgcgggacgcccaccatcgcgctgcaccgactcccgcgt
cacattatcgccagcatcgcgcagaatggaaacggcacgtcggtgtctgcgttggtccag
cagggcgcgcggatcaaccacagcaaaacacccgctgacaacaacgcgatgccagcggcg
acctcggcctcagcagcgcctgtcaaacccgctgttagtgtcagcgcgcccgcggtcatc
agacctgcgcagacgcagacgcagacgcatgcgcatgcgcagcagagggctgtaacgccg
cagctgattgtcagaccaccgcaacagcaaactactatacagctgccgcccggattcacc
atcccaccagggatggtgctggtccggacggagatgggtcagctggtgatggttcctcag
caggctctggctcaagctcaggcccagaacagcatctcaccgcgaccctccacacccacc
agtgtggccacgttcagggtcacgaccccacagtctcctgttagcactcaggcgattcgt
cccgcccctgcggctcaaactaaatcggtccagtcgagttccccgagcgtcccggcccaa
accagcgccgcagccggccccgctaagggccccgtggcagccgctgtggcagtgacagct
ccccagcaggtccagccggcctcgggcccccaggggcccctcactcagatgccactggcc
ccacagagcgcagccgccccggcccctggagctccgctcgtctcccaggagatgcaggac
aatgtgaagaagtgcaagaacttcttggccacgttgatcaagttggcgtcccataattcc
ccgtccccagagacgtctcgaaacgtgaaagcgctggtgcaggatttactggatgcgaag
atcgatccggaggagttcaccagccgcttacagtcggagctgaagtcttctccgcagccg
tacctcgtccctttcctgaagaaaagtctccctgcgttgcgtctgtctctcctgaacagc
cagcaatctctcacagtccctctgcagcccaacaaaaccagcgtgacgccggtccagacg
ggtgtcagtgtgcgtccacaccagcccaacagcaccactgtacttccacagggtatcaag
agggcagtgggtgctggaggtcagatacggatgcctgtggtcataacgcagacggtgcga
acgacaggtgctttagggaaacctgcggcgatccagacgggcaaaagccctgcgggcgtc
acaatacagctctcaggaaaccagaagaacaagctgaatgacccggggggaggctccttc
agagacgatgatgacatcaatgatgttgcatctatggctggtgtgaacctcaacgaggaa
agcgcacgcattctagcgaccaactcagatctggtgggaacgcagatccgctcctgtaaa
gacgaggccttcctgtctacaggtctgttacaccggcgtatactggaaacagcgaagagg
tttggcgtgacggacgtaccgctggagactgtgaacttcatctctcacgccacccagtcc
agattacgcacggtgctggagaaggtttcctccattgcccagcaccgaatggactcgtgt
aaggaagacgagtggctcgagcaggcgtctgatgtgcgctcgcagctcaagtttttcgag
cagttggagcggatggagaaacagaggaaagatgaacgagaacgagagattctcctcaga
gcggcgaagagtcgctcgcggcaagaagatccagaacaagcccgtctgaagcagaaagca
aaggagatgcagcagcaggaactcgcccaaatgagacaacgagacgccaacctgacggca
ctcgccgccattggtcctcggaaaaaacgcaaagtggactcaccaggagcaacaacgact
gaggtttcggggagttcggcaggttctccgagcggatcgttgaccccgtccagctcgtcg
aggcagtataaccgccagagaataacacgcgtcagcctcagggacttcatcttctacatg
gagcaggagagaaacaccagcagatctctcttactgtaccgtgctctcctgaagtag
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