Carassius gibelio (silver crucian carp): 127977861
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Entry
127977861 CDS
T08819
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127977861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127977861
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127977861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127977861
NCBI-ProteinID:
XP_052438994
LinkDB
All DBs
Position
B18:14389419..14392959
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AA seq
223 aa
AA seq
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MSIMMELDRGCSNLREYGNEQSLLSKPDGSSTFVQGDTSILAGVYGPAEVKVSKEIYDRA
TVEVLIQPKMGLPGVRERAREQCARETCEAALLLTLHPRSSVTVILQFGSLSNCQLLSCC
LNATCMALMDARLPMSHLFCSVTCAISKEGQIITDPTALQEKESRALLTFAIDSVEHNVL
MSSTKGSFSLQELQRCIAISQRASEQIFQFYRESVKRRYSKIK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatgatggagttagatcgaggttgttcaaatttaagagaatatggaaatgag
cagagtttgttatccaaacctgacgggtcttccacatttgttcaaggtgatactagtatc
ctggcaggagtttatggaccagctgaagtgaaagtcagcaaggaaatatatgatcgagct
actgtagaggttcttatccagccaaaaatggggcttccaggagtccgtgagcgcgcgaga
gagcagtgcgcgcgcgagacgtgcgaggctgcgcttctgttgacgcttcatcctcgctcc
tctgtcacagtcatcctgcagtttgggtccttatctaactgtcagctgctgtcatgctgc
ctaaatgccacctgtatggctctaatggatgcccggcttcctatgagtcaccttttttgt
agtgtgacctgtgcaattagcaaagagggccagataatcactgatcctacagctctgcag
gaaaaggaaagtcgagcgttgttaacatttgctattgatagcgttgagcataatgttttg
atgtcatcaaccaaaggctctttttcactccaggagctgcagcggtgcatcgcaatcagt
caaagggcttctgaacaaattttccagttttatagggaatctgtcaaacggcgatattct
aagataaaataa
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