Carassius gibelio (silver crucian carp): 127978519
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Entry
127978519 CDS
T08819
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127978519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127978519
Membrane trafficking [BR:
cgib04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
127978519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NPHP3_N
nSTAND3
AAA_14
RNA_helicase
TIP49
AAA_28
AAA_18
AAA_5
AAA_25
ABC_tran
AAA_33
DUF815
ATP-synt_ab
Sigma54_activ_2
RuvB_N
NACHT
AAA_29
Viral_helicase1
ATPase_2
IstB_IS21
Vps4_C
nSTAND1
Motif
Other DBs
NCBI-GeneID:
127978519
NCBI-ProteinID:
XP_052439185
LinkDB
All DBs
Position
B19:18677271..18688584
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AA seq
1246 aa
AA seq
DB search
MLGSQGIQPVTLVFSNSKNCFLQLSSNFATHLCLHENQILELSWGVSAPVFLSWISSRSS
GPQDRVEISRQLGEKLGLKEGEQGYLRPCLQVQSVQQVFVEPLSPDDWEILELHSVALEQ
RLLDQIRVVFSEGVFPVWVDQHTVIYIRIASLSPSVPFGRLEKFTELVVTPKLHPGGEQL
LRTRSEEPGQYLQHQNIDVTSSSSSIVHQDPLSDHLESQNEAHWGGIADLKTLVRYLFRG
GFEPAKEHVAVPTIPTILKDCILRTCGTPPRSVSHLGSCHGDVHILPWNLQEQENWNPGQ
SALTYGRLSKILSPKELGEKVKQAMEKKKIRAGPHRGNDAEEHKENAVVVRMLCHNIKRL
QQDQKLNKCEDIYSGRVWIPKVLQKLLRIDPRSAVRIQPLKSKPRVAEAVMVQPLKPLAE
SEKEEDIQTAFLNWLHAQSHQPLSCLTGRTNTIVLPCAEGKEEFVLTVLKPEQQQEDEMF
FLSTSLLKKTNVQTFREPHASDHSGSDNDTEDPHLGFPSLSSLGGVEAISRSAFEHISHA
LMGGPLSRELVSTGRGLRGGALLITGAKGSGKSSLSRALCRKASEQLDAHVQVVYCKTLK
GKRADTIRQRLEEVFEQAVWRQPSVVLLDDLDHVTGAATSPEHEHGPEAVLRLHIAQSLR
DLVDEMVVRSSLVALMVTAQSEHGLHQTLTAVQGSHFFQSFCKIPTPDQTQRVAILRSLI
AKKNSQDCQTTLDLDSVARETEGFMPRDLHLLLERAIHANTLHSRNNGSSEDLNYKDFRQ
ALQGFTPPSLWGAQLQTPSGAGMERIGGLHQARQLLMDIILLPAKYPLLFSSLPMRQCSG
VLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQLAKPCI
LFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDREARLEILKALTHSVPLAADVDMEQIAVATELFTGADLKALLYNAQL
EAIHSSLGPNILHDLGSGSDSDVSLSSLIFLNHSSGSDDSAGEGDPGLEHSMVLLDPSEL
PPEDPRHNIWRLYFGSSFESELDNQSLSELNSQCLSGPNSTAPDLTGASVRDPNSCRAPV
FMSCLQDGFQELTHDHSECLRAEVNTVKNSYRRNPDESSLVQTGPSKPGSVICQTHLISA
LANTRASVSREDWKRYNELYESYGASKEGKSQSTASFKAGQRVTLA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagccaaggaattcaacctgtcacgctagtcttcagtaactccaagaactgc
tttcttcagctgtcatcaaacttcgccactcatctctgtcttcatgagaaccagatcctg
gagctgtcctggggtgtttctgcacccgtgttcctcagctggatcagctccaggtcttca
ggtccccaggacagagtggagatcagcagacaactgggagagaaacttgggctcaaggag
ggagaacaggggtatctgcggccgtgtcttcaggtgcagtcagtgcagcaggtgttcgta
gagcctctgtctccagatgactgggagatcctggagctgcacagcgtggctctggagcag
cgactcctggatcagatccgagtggtcttcagtgagggggtttttcctgtgtgggtggac
cagcacactgtcatctatatcaggattgcatccctctctccctctgttccattcggccga
ctggagaagttcacggagcttgttgtcaccccaaaactacatccaggaggtgaacaactg
ctccgcactcgatcagaagagccaggccaatatctacaacaccagaacattgacgtcacg
tcttcctccagctcaatcgtccatcaggatcccctcagtgatcatctggagagtcagaat
gaagctcattggggaggaatagctgacctgaaaaccctggttagatacctgtttagagga
ggatttgagcctgcaaaagagcatgtcgcagttcccacaattcccaccatcctgaaagac
tgtatcctccggacctgtggaacccctcctaggtctgtcagccatctaggctcatgtcac
ggagatgtccatatactgccatggaacctgcaagagcaagagaactggaatccagggcag
tctgctctaacatacggcaggctttcaaagatcctttctcctaaagaactcggggagaaa
gtcaagcaggccatggagaagaagaagatcagagctggacctcacagagggaacgacgca
gaggaacataaggagaatgctgttgtggtcaggatgctttgtcacaatataaaaaggctg
cagcaggaccagaaactcaataaatgtgaagacatttactctgggagagtttggatccca
aaggtgctgcagaagcttttgaggatagaccctcgttcagctgtgaggattcagccttta
aaatcaaagccaagagttgcagaagcagtcatggtgcagccattaaaaccgttggcagag
agtgaaaaggaagaagatattcagactgcatttctcaattggttacatgctcagagccat
cagcctttgagctgtctgacaggccgcactaacaccatagtcttaccctgtgctgaagga
aaagaagagtttgtcttgactgtgctgaaaccagagcaacagcaagaggatgaaatgttc
tttctttcaaccagtttactaaagaaaacaaatgtgcagactttcagagagccgcatgct
tctgaccacagcggctctgataatgatactgaagatccacatcttggctttccctcgctc
agctctcttggtggggtagaggccatcagcaggtcagctttcgagcacatctctcacgct
ctaatgggaggtcctctctcgcgtgagctggtctccacaggacggggactgaggggcgga
gctctgctcatcacaggtgcaaagggcagtggaaaatcttctctctccagagcactgtgt
cgaaaggccagtgaacagctagatgcccatgttcaagttgtgtactgcaagacactgaaa
ggtaagagagcagacacaatcagacagagactggaagaggtttttgagcaggcggtctgg
agacagccctcagtggtactgctggatgaccttgatcacgtgaccggagccgcaacctca
cctgaacacgagcatgggccagaggcagtgctgcggctgcacatcgcacagagtctgagg
gatttggtggatgagatggtggtgcgctccagtctcgtagctctgatggtcacagcacag
agtgaacatggccttcatcagactctgacagcggtgcagggttcacacttcttccaaagt
ttctgcaagatcccaacaccagatcagactcaaagggttgcgattctaaggtctttaata
gccaaaaagaactcccaggactgtcagactactcttgacctagacagtgttgccagagaa
acagaaggattcatgccacgagacctgcacctgcttctggagagggccatccatgccaac
actctacacagcaggaacaatggcagctctgaagatctgaactataaggacttcagacag
gcccttcagggcttcaccccgccgtccctctggggggctcagctgcagactcccagtggg
gccggcatggagcgtatcgggggacttcatcaggcacgtcagctcctgatggacatcata
ctgctgccagctaagtacccgctgctgttctccagtctgcccatgcgtcagtgctctggt
gtgctgctctatggagctcctggcacaggcaagacgctactggctggagctgtagccaaa
gagagcggcatgaacttcatcagcatcaagggtcctgaacttctcagcaagtatattggt
gccagtgagcaggcggttagagatgtgttccagagggctcaactagctaaaccttgcata
ctgttctttgatgagtttgactctctggcccctcgaaggggtcatgacaacacaggggtc
actgaccgtgtggttaatcagctgcttactcagctggatggagtggaaggactgacaggg
gtgtatgtgttggctgccaccagtcgtcctgacctgattgatcctgctctattaagaccc
gggcgactggacaaatctctctactgccctcctcctgatcgggaggcccggctggagatc
ctgaaggctttgactcattctgtgccactggctgcagatgtggacatggagcagattgct
gtggcaacagagctgttcactggagctgacctaaaggcccttctctataacgctcagcta
gaggctatccacagcagcctggggcccaacattctccatgatctgggctcagggtcagac
agtgatgtcagcctctcctccctgatcttcctgaaccatagcagcgggtcagatgactca
gctggggagggggacccagggttagagcactctatggttctgctggaccccagtgaactc
ccacctgaggacccacgccacaacatctggcgcctttacttcggaagctcctttgagtct
gaactggacaaccagtctctgtctgaactgaattcacagtgcctgtctggaccgaattca
actgcccccgacctgacaggggcatcggtgagggatccaaactcctgtcgtgccccagtt
tttatgtcctgtctgcaggacggctttcaggaactgacacatgaccattcagaatgcctc
agagcagaagtcaacactgttaagaacagttaccgcagaaacccagatgaatcatctctg
gtgcagactggtcccagtaaacctggctctgtcatatgccaaactcacctaatctccgct
ttggctaacactcgagcatctgtcagcagagaagactggaagagatacaatgaactatat
gagtcttatggagcctcaaaggaaggcaagtctcagagcactgcttcgtttaaagcaggt
cagcgggtgacattggcttaa
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