Carassius gibelio (silver crucian carp): 127978584
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Entry
127978584 CDS
T08819
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127978584
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgib00535
]
127978584
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
127978584
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
127978584
Proteoglycans [BR:
cgib00535
]
Cell surface proteoglycans
Others
127978584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
PTPlike_phytase
DSPc
Y_phosphatase3
CEND1
GUN4_N
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
127978584
NCBI-ProteinID:
XP_052439318
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Position
A4:33461377..33492185
Genome browser
AA seq
1258 aa
AA seq
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MRLITAKSLLFIVQLWLICHTDLSVSYLRGQRKFAEDVDWSYTGSLNQKHWVKKYPVCGN
ARQSPIDISEELTQVRVQYQNLQLENWDQPTTEYTTITNDGKTVVISLNGQYFISGGGLR
SRFKVGRITFHWGRCNTTSDGSEHSLNGNSFPLEMQIYCFNDEEFESIDEAISSGGKITA
VAVLFEASIEDNQDYAAIIEGVNSVSRFGKSIALEAFSLLALLPQSTEKYFMYNGSLTAP
PCSENVEWIVFKNTVAISEAQLEVFCEVMTIQQAGYVMLTDYLQNNYREQQPQFMGQVFS
SYTGTEEVPAPMCSSEPLNLQADSQNYTGIVVTWERPRAVYDTTIERYSITYQRLQGKDP
PKQQYLTDGDQDVGAIIHHLLANSSYVVQVVALCTNGLTGKMSDQVIVDMPFEDPVNEPD
PFGDLTEPEEYNEDTTSPASSSPPGNSKNRNETKRPLNRLLPEESVHLPHSNMQVTDVYY
EDILSTTKITPAQNNDLLTALPDAQEQETSNMTAKTLKPTAKPAVNTTLIADASTVATGS
ALSASMKIISQSTQPLFNEASNSSPESRVGMVGGTEKEKRTLVPLAVVSTLTVLCLLVLV
GILIYWRRCFQTAQFYAEDNISARAISAPSTPLLLPSEDNEALPVKEFIKHVADLHANHT
FAKEFEILKESYEEIQGCTVDICSTTDSSNHPDNKIKNRYINILAYDHSRVKLFLNSDRD
GKAGDYINANYVDGYNQPKAYIAAQGPLKGSLGDFWRMIWEQNVGVIVMITNLVEKGRRK
CDQYWPSENQEDYGSFLVTLKSTKTLAYYTQRTFILRNVDVKKGSQKDRSQERTVFHFHY
TQWPDMGVPEYTLPLLSFVRASSQPRTADLGPVVVHCSAGVGRTGTYIVIDSMLKQIKEE
SKVNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAIRSKETLVSSSHIHTHVSDLLTPG
PTGKTRLEKQFKLVSQSCAKQSDYTVALEERNASKNRTSCLMPVERSRVILSTGPGEASD
YINASYLTGYHQTHEFIVTQNPLPNTIQDFWRMIWDHNAQIIVSLPDTQSASRDGECVYW
PTKDQPISCETFTVTFRGEDKLYLSNEESLVVQDFILEALKDDYVLEVRRYQSPRWPNPD
SPISNCFELINIIREESSRREGPAIIHDGSGGSSAALLCSLTSLVDQLEEENSVNVYQTA
RMMNLMRPGVFNDIDHYQFLYKAILSLVSTKEDERALHHSGNNGTVPANPLESLESLM
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcacagccaaatcacttctgttcatcgtgcagctgtggctcatctgtcac
acagatctgtctgtgtcgtacctgagaggtcagcgcaaattcgctgaggacgttgactgg
tcttacacagggtccctgaaccaaaagcactgggtaaagaaatatccagtgtgtggcaat
gccagacagtctcccattgacatcagtgaggagctcacacaggtcagggttcagtaccag
aacctgcagctggagaactgggaccaacccaccaccgaatacaccaccatcaccaacgac
ggcaaaacagtggtaatcagtttgaacggtcagtacttcataagcggaggtgggctcaga
tccaggtttaaagtgggcagaatcacgttccattggggccgatgtaacaccacttcagac
ggatctgaacacagtctcaacggaaacagtttccccctggagatgcagatctattgcttt
aatgacgaggagtttgaatccatcgacgaggcgataagtagcggaggaaagattactgct
gtagctgttctgttcgaggccagtattgaagacaaccaggactatgcggccatcattgaa
ggagtgaacagcgtgagccgatttggtaaaagcattgctctggaagcgttttctctgctg
gctctgcttccacagtccactgaaaaatacttcatgtacaatggctcactcaccgcgccg
ccctgctccgaaaacgtggagtggattgtgtttaaaaacacagtggccatctcagaggca
cagctggaggtgttctgtgaggtgatgaccatacagcaggccggatacgtcatgttgacc
gactacctgcagaataactacagagaacaacagccgcagttcatgggacaagtgttctcg
tcctacacgggcacagaggaagttcctgcacccatgtgcagctctgagccgctgaacctg
caggccgactctcagaactacacggggatcgtggtgacgtgggaacggccgcgggccgtc
tatgacaccaccattgagcgctactccatcacctaccagagactgcagggcaaagacccg
ccaaaacaacagtatctcacagacggagaccaggatgtgggagccattatccatcatctg
ctggcgaacagtagctatgttgtccaggtggtggcgctgtgcaccaatggcttgactgga
aaaatgagtgaccaggtgattgtggacatgcctttcgaagacccagtaaatgagcccgat
ccctttggagatttaacagaaccagaggaatataatgaggacacaacatcacctgcttcc
agctctccgcccggcaacagcaagaacagaaatgagaccaaacgtccactgaacagactc
cttccagaggagagcgtccaccttcctcacagcaacatgcaggtcacagatgtctactat
gaggacatcctcagcaccacaaaaatcaccccagcccaaaacaacgaccttctcactgcg
ctgcctgatgctcaggagcaagaaacatcaaacatgacagccaaaactttaaaacccacc
gctaaacctgcagtgaacacaaccttaatagctgacgctagcactgtcgccactggatca
gcgctttcagcatctatgaagatcatttctcagagcactcagcccctgtttaatgaggcg
agtaacagcagtccagagtctcgtgtcgggatggtgggaggtacagagaaggagaagagg
acgcttgttcctctggctgtggtttcgacgctcactgtcctgtgtctgctggtgctggtg
gggattctcatctactggagaaggtgctttcagactgcacagttttatgcagaggacaac
atttcagcccgagccatatctgccccgtcaacccctcttcttctgccttcagaggacaat
gaagctctcccagtaaaggaattcataaaacacgttgctgatcttcatgcaaatcacaca
ttcgccaaagaatttgagatcttgaaagagtcttacgaggagattcagggctgtacggtg
gacatctgcagcactacggacagctccaaccatccagacaataagatcaagaacagatac
attaacatcctggcctatgatcacagtcgagttaaactctttctaaactctgacagagat
ggaaaagcaggggactacattaatgccaactatgtggatggctacaaccagccgaaagca
tatatagccgcccagggtccgctgaagggcagtctgggagacttctggaggatgatatgg
gagcagaacgtgggtgtgattgtcatgatcactaacctggtggagaaggggcggagaaaa
tgtgatcagtattggccctcggagaatcaggaagactatggatccttcctagtcacactg
aagagcaccaaaactcttgcctattacacgcagaggacattcatcttgaggaacgttgac
gtcaagaagggctcacagaaggatcgcagtcaggagaggacagtgtttcactttcattac
acccagtggcccgacatgggcgtcccagaatacactctgcccctgctgtcgtttgtgcgg
gcgtcctcgcagcccaggacggctgatctggggcctgtggtggtccactgcagtgccggt
gtgggaagaacaggaacctacattgtgatcgacagcatgttgaagcagataaaggaggag
agtaaagtgaacatcatgggattcctcaaacacattcgaacccagaggaattatctggtg
cagactgaggagcagtacgtcttcatccatgatgctctagtggaggccatcaggagtaaa
gagaccctggtctcctccagtcacattcacacacatgtgtctgatctcctcacaccggga
cctacaggaaagacccgcctggagaaacagtttaagctggtcagtcagagctgtgcaaaa
cagagcgattacacagtggctttagaggaacgcaacgcatctaaaaacaggacatcctgt
cttatgcctgtggagaggtcaagggtcattctgtctacaggacctggagaagcatcagac
tacatcaatgcctcttatttaacgggctaccatcagacccacgagtttatcgttacccag
aatcctctgccaaacaccatacaggacttttggaggatgatctgggatcacaatgcacag
atcatagtttctctgccagatacacagagcgcgagcagagacggagagtgtgtgtactgg
cccactaaagatcagccaatcagctgcgagaccttcactgtgaccttcaggggtgaggac
aaactgtacctgtccaatgaggagtcgcttgtggtacaggacttcattttggaggctcta
aaggacgactatgttctggaggtccggaggtaccagagccctcgctggccgaaccctgac
agccccatcagcaactgctttgagctcatcaacatcatcagagaagagagctcacgccga
gagggacccgccatcatccacgatgggtctggaggatcgagtgctgctttactctgttca
ctgaccagcctggtcgaccagctggaagaggagaacagtgtaaacgtttatcagactgcc
agaatgatgaacctcatgaggccgggagtcttcaacgatattgatcactatcagttcctc
tataaagctatcctgagtttggtgagcaccaaggaggacgagagagcacttcaccactcg
ggaaacaacggcacggttcccgccaacccgttggaaagcctggagtcgctcatgtag
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