Carassius gibelio (silver crucian carp): 127978817
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Entry
127978817 CDS
T08819
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127978817
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127978817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
127978817
NCBI-ProteinID:
XP_052439694
LinkDB
All DBs
Position
B19:complement(31867934..31891416)
Genome browser
AA seq
2447 aa
AA seq
DB search
MKPIKKQERRSPPSTRAKGGKKRTADSSPQEEKRETEEKTQISSTSPKRHISSNSDSSQE
GPLTRSGSPEKVGALSIAVDFGKTEECPRSSKSGGTQSDSNSSTISASNSPNPSSSRKTA
TFKARVPKKKYTSEHYAGNHGNASTPSTPPQSSSSSHNGSSASQGPAASAAHTDLHGQSQ
LAEDNITGYGHNDVTGPTGGTAGECRERDRPSTSSPQRCSSTDTASEHSADLDVTTSRRD
SNSNSQKQQAHSTSTFSQESLSSGVAGVLAKGLKNQRVLARQGPRLGEGWPHDRGREISG
VFRTGVVRRVSEEHGIVEVQLNGEKTICKYPFRVATDSVDLILDASPPGVAPVAIGSLVC
IPFGGGDEGSEGAQKWYREGIVTQVDPHPAVSFPYRVQLREDRSDERKERSGVEDDGRAQ
AIWVSRQNLRLLVPPWDFEPAQPAEPGIDGRRVREREWEEREDMEVEQEVVQLTRPTFVQ
SLLQPFPSPHSSSSVVNTAITSVLSVPPNRDWETHREKDQERDLHRHLERERERERERER
QKHHQPHHLYSSTPDGVDLEVSCLSQLRDGGITALGSKALGAPSQHRPILSKPNYLSPHL
SVVRGLSTPIAPHLPLAPHPNHPPMLLGLGSATGAAVISSTSQLPHLPPSSSQGSLDKTP
SSNLHGASGGGSGSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSRE
GCSKESQRRGYCSRHLSMRTKEMESGGGVGRDRSGASSTGTITPDLRLGGRTSSEYDWDD
NSRDSSEASSRGGDSRPRLVMTSLIPQELTRDMSRFDFDECEAANMLVSLGSSRSCTPPF
SPVSNQSPFSPAPSPSPTLFGIRPDNFSPITAPLTPRRPRHLSGTKIPGTPSSERERHIS
GHIVPTFQNNLTFTVPMSPSKRKLDVPPPPLPSTSDYGKSDPQLNDPSLSLNAAAFRVLS
PQSQPTTPSYLSFSRQRSITSRPSSSAASTPPPMLVSPTPPSPLPQDPSSRRIVPLRDSP
VIVRNPDVPLAKFSDGPLSRRASSRSREHSQTFHHAVGLQAPVPINGAATNGAVLLRNPA
PTLVLVTSSQSLTTVASGHPAHSNSAALNVSTSNATTGPTLALSGSGGKEQERKLGGPSV
AGGALPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVPVFAWHS
LVPFLETSQTKMSMQPADGQTLVNQSKEPRCGVALVTEGPTDHPTPQRGSPSCPPPPAED
PPVEGGGDSETESDADDLFFPAQDTAPSTSPVKRRTQSLSALPKEGDKKREKDHIRRPMN
AFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKKKYHDLAFQVKEAHFRAHP
DWKWCNKDRRKSLSEGRGTPGAKEARERSMSESTEAHSASQGADHKGAGPSWTSPRPDGH
GSMGGQLQRPRAFSQSAVHTLERREKERVLESTGPFHPRAPAHPQRLSEDVTSDEEPMVI
CEEGDDDVLEDSFADGSIDLKCKERVTDSDDENEHADEADSKRTFQPVHSSSALSTTVTT
GNKDIEDGGEKNLEKEKRGMGGAELDNWGIQEGKGGGGGGQVSFHVNSASVTGITTTLPH
NPGTYPSQGAVRMAPTVVTNVVRPITSTPIPIASKPADGGVAVGTLPPDRKPKLLIGAGG
AGGGGYFPSSSPKPNGQGNLVTSLVLGGAFQNQPTVQLITPPQPTPCNGAPNNSAVPLPL
LHHQFLPAASSGGKPVTQVQYILPTLPATANPNSPSSHQPSSVLTLSSAAPTHVSLANGV
HSGAGQGLRYASVPAVGGVSTAGGVHAQSPVLQSKMLVPMATMGTGSTPPQPISLVGPPL
PVQHGTQPGSKIIQIAPMPVVQTNVHPGGSVHTGNSFPVSMPTATVMAPAPTPPQTVLLT
PPPTRITYVQSTPGVTAPFPLGSTPAVSSTHQTPSPAAPSFLQSPVATIGFTAIAPAGQA
LVQPIVASQPPLLAPCPPLGGLSQRAQASTATHQLVTAIYPSVSLAGGVVSVTAVPQSTE
SSTSAPASSSMHQEKTPSAAAAQPHAQTDPQLQSQGNMHMENERGPETRKEMEKQRDLVV
SKDGHQTPPSGLEESVQHTHKGQHCEGKEDGKKGSELERESESDVGGVPSQTERAERARA
MEGETESQAEINSKDESREPGRREASVLDPPPPPLQTDSPSVKKTKFRPPPLKTPTDAGD
KALFGSSFEERLKELPEFKPEDVLPSPNLQSLATSPRAILGSYRRKRRNSTDLDSVDDPS
SPRRKSRCLSSCSSEPNTPKSAAKCEGDIFTFDRAAGETEHILEEFDRVPPSSLRRMLDQ
RRALVMQLFQEHGFFPSAQATAAFQARHSDTFPSKVCLQLKIREVRQKIMQNAGSSETMG
GVASGSSDSASTPGPSNPAARENSEADERGRATEEPKKDMGEPQESR
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccattaaaaagcaagaaaggcggtcgcccccatccactcgtgccaagggaggt
aagaagaggacagcggacagtagcccacaggaagagaagagagaaacagaggaaaaaacc
caaatttcatctacctctcccaagagacatatctcctcaaattctgactcatcacaggaa
gggccactgacaagaagcgggtctccggaaaaggtgggggccctcagtatagcagtggat
tttgggaagacagaggaatgccccagaagctcaaagtctgggggaacacagagtgacagc
aacagtagtacgatcagcgccagcaacagccccaacccttcatctagtcgcaagacagcc
acttttaaggcccgtgtgcccaagaagaagtacacctcagagcactatgccggaaaccat
ggcaacgccagcactcccagcactcccccacagagcagcagcagctctcataacggaagt
agtgctagtcagggtccagctgcctctgctgcacacacggacctacacggtcaaagccag
ctggctgaggataacatcactgggtacggacacaacgatgtaactgggcctacaggtgga
actgcaggtgagtgcagagaaagggacaggccgagcacatccagcccacagcgttgctcc
tcaaccgacacagccagcgaacactcggctgacctagacgtgacaacttcaagacgtgat
tctaactccaactcccaaaagcaacaagcacatagcacttcgacattctcacaggagagc
ctgtcatccggtgtagccggtgtcctcgccaaaggtctaaaaaatcagagagttctggcc
cgacagggtccaagattaggggaaggctggcctcacgatcggggccgggaaatatctggt
gtgtttcgcactggagttgtgcggagagttagcgaggagcatgggattgtggaggtgcaa
cttaatggagaaaagaccatatgcaagtatccatttcgagttgctactgattctgttgac
cttattttagatgcctcacctcctggtgtggccccggtggctataggatcactagtctgc
atccccttcggaggaggtgacgagggcagtgagggagcacaaaagtggtacagagaaggt
atagtcactcaagtagatccacacccagctgtgtctttcccataccgtgttcagctaagg
gaagatcggtctgatgagagaaaggagaggagtggtgtggaagatgacggaagggctcag
gccatttgggtttcacgacaaaatctccgtcttctggttcctccttgggattttgagcca
gcccagccagcagagccaggtattgatggaaggagggtaagagaacgagagtgggaggaa
agagaggacatggaagtggagcaggaggtggttcaactgactagaccaacgtttgttcag
agtttgctgcaacctttcccctcaccccattcttcgtcctctgtcgttaacactgccatc
acatctgtactcagtgtgcccccaaacagagactgggaaacccacagagagaaggatcag
gaaagagacttgcataggcacttagagagagaaagggaacgagaacgagaaagggagagg
caaaagcatcatcaaccccatcatctttattcatccaccccagatggtgtggacttggaa
gtcagctgtcttagccagctaagggatggtggcatcactgccttgggaagcaaagctctt
ggggctccttctcagcatcggcccattctttctaaaccaaactacctcagccctcacctt
tctgtggtgagagggctcagtaccccgattgcaccccatttgccccttgctcctcaccca
aatcacccccctatgctcttgggcctgggttcagccacaggtgcagcagtcatctcatcc
acgtcccagcttcctcacttgcccccaagctcttctcaaggctccctggacaagaccccc
agctccaacttacatggtgcatcagggggtggctctggatcctcatcctcttcgtcacgg
tcccgcacacccctcacggccgctcaacagaagtacaagaagggcgatgtggtgtgcacc
cctacaggcatccgcaagaagttcaacggaaagcagtggcgcagactttgctcacgtgaa
ggctgctcgaaggagtctcagaggcgtggctactgctctcggcatctctccatgcgcacc
aaagagatggaatccggaggcggggttggccgagaccggagtggcgccagtagcactggc
accatcacacctgaccttcgtttaggtggacgcaccagcagcgaatatgactgggacgac
aactcaagagacagcagtgaagccagcagccgtggcggggactctcgaccacgtctggtg
atgacttctcttataccacaagaactgacacgtgacatgtcgcgctttgactttgacgag
tgcgaggctgcaaatatgttggtctcactaggaagctcacgctcatgcacgcccccattt
tcacctgtatccaatcagtcaccgttctcacctgcgccatccccctcgcccacgctattt
ggcatccgcccagataatttcagccccatcacagcaccactgacccctcgccgtcctcgc
cacctcagtggcactaaaatccctggcactcccagctcagaacgtgagcgccacatctct
ggccacatcgtccccacttttcagaacaacttgacattcactgtacccatgagtcccagt
aaacgtaaacttgatgtccccccacccccgctgcctagtacatcagactatgggaaatct
gatccccaactcaatgaccccagcctcagcctcaacgcagcagcattcagggttctatcc
cctcaaagccagcctaccaccccctcatatctctcattttctcgacagaggagcatcaca
agccgaccctcatcctctgccgcttccactccaccccctatgctggtttctcccacacca
ccctcgccattgccacaggatcccagctcacgtcgtatcgttcccctacgcgattcacct
gtcattgttcgtaaccctgatgtgccgttggcaaaattcagcgatggtccactgagccgt
agagcaagctcacgctctagggagcacagccaaacctttcaccatgccgtgggactccag
gcccctgtgcccataaatggtgctgccaccaacggagccgttcttcttcgtaatcctgct
cccaccttagtcctggtgacttcctctcagtcattgacaactgtggcttctgggcatccc
gcccattcaaactctgccgctttgaatgtgtccacctctaatgcaaccactggacctacc
cttgcactatctggctcaggaggtaaagagcaagagaggaagttaggtgggccttcagtt
gcaggtggtgctctcccacagcctgtggcttgccatccttcacccactgctctgttgccc
ctcatcctgccagccgagtcccctcaccctgctcctcgcaaagacatcatcatgggacgg
cctggcactgtttggaccaatgtggagccccgctctgtgccagtgttcgcgtggcattcg
ttggttccttttttggagaccagccagacaaaaatgtccatgcagcctgcagatggccaa
actcttgtaaatcagagcaaagaacctcgctgtggagttgcccttgtgactgagggacct
actgaccatccaactccacagagaggttccccgtcttgcccacctcctcctgctgaagac
ccacccgtggagggaggaggtgacagtgagaccgagagtgatgctgatgacctttttttc
ccagctcaagacactgctccatccaccagtccagtgaaaagacgcacacaatctctcagt
gcactcccgaaagaaggtgacaagaagagggaaaaggaccacatcagacggccgatgaat
gcatttatgatctttagtaagcggcaccgtgcactggttcaccagcggcaccccaaccag
gacaaccgtaccgtcagtaaaatactgggtgagtggtggtacgcgctgggacccaaagag
aagaagaagtatcatgatcttgccttccaggtgaaggaggctcatttccgagctcaccct
gattggaaatggtgtaacaaggacagaaggaagtccctgtctgagggcaggggaactcca
ggggccaaagaagctcgcgagcgcagcatgtctgaaagcacagaggcccattctgcatct
cagggggcagaccacaaaggagcaggacccagctggacttcacctcggcctgacggtcac
ggatcaatgggagggcagcttcaacggcctcgtgccttttcccagagcgctgtgcatact
ttggagaggagggagaaggagagagtgctggaaagcacgggaccgtttcatccccgtgcc
cctgctcaccctcaacgactgagtgaggatgtgaccagtgatgaagagcctatggtgatc
tgcgaagagggggatgatgatgtcctagaagactcatttgcagacggctccattgacctg
aagtgtaaagagagagtgacagacagcgatgatgaaaacgagcatgcagatgaagctgac
agcaagcgcaccttccaaccagtccattcctcttcggcgctctctacgactgtcacaact
ggcaacaaagacattgaagatgggggtgaaaagaacctggagaaggagaagagaggcatg
ggtggtgcagaactggataattggggaattcaagaaggcaaaggaggaggtggaggaggg
caggtttcgttccatgttaattcagcctccgtcaccggtataactactactttgccacac
aatcccgggacatacccttcgcaaggtgctgtcaggatggcccccactgtagtgaccaat
gttgttcgtcccatcactagcacccctatccccatcgccagcaagccagctgatgggggt
gtggctgttgggacccttcctccggacagaaagcccaagctactgattggtgctggcgga
gcaggaggaggtgggtactttccctcctcttctcccaaacctaatgggcaaggaaactta
gtaactagcctagtcctgggaggagccttccaaaaccaacccaccgttcagctcatcacc
ccaccacaacctactccttgcaacggagcccctaataacagcgcagtaccccttcccctg
cttcatcaccagttcctccctgctgcctctagtggtgggaaacccgtaacacaggtgcag
tacattcttccaactctacctgcaactgccaatcccaacagtccctcctcccatcagccc
tccagcgtcctaaccttgtccagtgccgcacccacccatgtgagcctggccaatggtgta
cattcaggggcagggcaaggattaagatatgcttcagtcccagcggtgggaggagtcagc
acggcaggtggagttcatgcacagtccccagtcttgcagagcaagatgttggttcccatg
gcaacaatgggaacaggatctacacctccgcagccaatttccctggtgggtccacccctt
cctgttcaacatgggactcaaccaggaagtaagatcattcaaattgcaccaatgcctgtg
gtccaaacaaatgtgcatcctggaggatcggtgcataccggcaactcgtttcctgtctct
atgccaaccgcgactgtcatggcccctgcgcccacccctcctcagacggtgctcttgacg
ccaccacctacaaggatcacatatgtccagtcaactcctggagttacagctccttttcca
ttgggttcaacacctgcagtctcttccacccaccagaccccgtcacctgcggctccatct
tttttgcaatctccagtggcgaccattggcttcactgcaattgcaccagcaggtcaggcc
ttggttcaacctattgttgcaagtcagccacccctcctggctccatgcccgcccctgggt
ggattgtcacaacgtgcacaagcctcaacggccacccatcaacttgtgaccgccatttac
cccagcgtcagcttagccggaggagttgtgtcagtgacagccgtgccacaaagcacagaa
agttccacatcagctccagcatcatcctcaatgcatcaagagaagaccccctcagccgcg
gctgcgcaaccacacgcacagacagacccgcagcttcagtctcagggaaacatgcacatg
gaaaacgagagaggaccagaaactaggaaggagatggagaaacagagagacctggtggtg
tcaaaggatggacatcagacgccacctagtggtttggaggaatcggtgcagcacacacat
aaaggtcagcattgtgaagggaaggaggatggaaagaaagggagcgaactggagcgagag
tccgagagtgatgttggaggggtcccgtctcaaacagagagagctgagagagcaagagcg
atggaaggagagaccgagagtcaagctgagatcaacagcaaagacgagagtcgagagcca
ggacgcagggaagcttctgttttggaccccccaccaccccctttgcagactgactcccct
tcagttaaaaagaccaaattccgcccacctccactgaaaacccccacagatgctggtgac
aaggcgctgtttggctcctcttttgaagagcgtcttaaagagctgccagagttcaagcct
gaagatgtactgccctctcccaatttacagagtttagcaacttcccctagagccatcctg
ggcagctaccgcaggaagcggaggaactctacagatctagactctgttgacgaccccagt
tcacctcggaggaagagtcgctgcttgtccagctgcagctcagagcccaacacacccaag
agtgctgccaagtgtgagggggacatctttaccttcgacagggctgcaggagagacagag
catattttggaggagtttgaccgtgtgccgccttcctctctgcgtaggatgttggaccag
cggcgtgcgctcgttatgcagctcttccaggagcacggcttcttcccctcggcgcaagcc
acagctgccttccaagctcgccactcggacacgtttcccagcaaggtgtgcctacagctg
aagatccgcgaggtaaggcagaagatcatgcagaatgccggcagttcggaaaccatggga
ggcgtggccagtggaagctctgactccgcctctactcccggaccatccaatccagcggcc
agggagaattccgaagcggatgagaggggcagggccacggaagagccaaagaaagacatg
ggcgagccgcaggagtcgagataa
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integrated database retrieval system
